RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 ZMIZ1Q9ULJ6 1067 aa9.85□□□□□ -0.83
CDKN3-203ENST00000395577 FAM196BA6NMK8 535 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 USP17L15C9J2P7 530 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 USP17L10C9JJH3 530 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 USP17L13C9JLJ4 530 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 USP17L12C9JPN9 530 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 USP17L11C9JVI0 530 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 USP17L21D6R901 530 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 USP17L18D6R9N7 530 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 USP17L22D6RA61 530 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 USP17L17D6RBQ6 530 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 USP17L19D6RCP7 530 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 USP17L20D6RJB6 530 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 ATP5J2-PTCD1G3V325 749 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 RASA1P20936 1047 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 USP17L24Q0WX57 530 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 EML3Q32P44 896 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 TMCO4Q5TGY1 634 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 ZNF511Q8NB15 262 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 STK32AQ8WU08 396 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 FOXJ1Q92949 421 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 CHIC2Q9UKJ5 165 aa9.84□□□□□ -0.83
CDKN3-203ENST00000395577 ERFEQ4G0M1 354 aa9.83□□□□□ -0.84
CDKN3-203ENST00000395577 CRTC2Q53ET0 693 aaPredicted RBP9.83□□□□□ -0.84
CDKN3-203ENST00000395577 TMEM164Q5U3C3 297 aa9.83□□□□□ -0.84
CDKN3-203ENST00000395577 TSGA10IPQ3SY00 556 aa9.82□□□□□ -0.84
CDKN3-203ENST00000395577 TRAF7Q6Q0C0 670 aa9.82□□□□□ -0.84
CDKN3-203ENST00000395577 GIGYF1O75420 1035 aaPredicted RBP9.81□□□□□ -0.84
CDKN3-203ENST00000395577 PTK7Q13308 1070 aa9.81□□□□□ -0.84
CDKN3-203ENST00000395577 C4orf48Q5BLP8 95 aa9.81□□□□□ -0.84
CDKN3-203ENST00000395577 POTEGQ6S5H5 508 aa9.81□□□□□ -0.84
CDKN3-203ENST00000395577 SLC10A4Q96EP9 437 aa9.81□□□□□ -0.84
CDKN3-203ENST00000395577 DOLKQ9UPQ8 538 aa9.81□□□□□ -0.84
CDKN3-203ENST00000395577 B4GALNT3Q6L9W6 998 aa9.8□□□□□ -0.84
CDKN3-203ENST00000395577 CCDC85AQ96PX6 553 aaPredicted RBP9.8□□□□□ -0.84
CDKN3-203ENST00000395577 NISCHQ9Y2I1 1504 aa9.8□□□□□ -0.84
CDKN3-203ENST00000395577 PPEF1O14829 653 aaPredicted RBP9.79□□□□□ -0.84
CDKN3-203ENST00000395577 SH3BP2P78314 561 aa9.79□□□□□ -0.84
CDKN3-203ENST00000395577 RNF20Q5VTR2 975 aa9.79□□□□□ -0.84
CDKN3-203ENST00000395577 TRIM50Q86XT4 487 aa9.79□□□□□ -0.84
CDKN3-203ENST00000395577 OGFOD1Q8N543 542 aa9.79□□□□□ -0.84
CDKN3-203ENST00000395577 FAM200AQ8TCP9 573 aa9.79□□□□□ -0.84
CDKN3-203ENST00000395577 NOD1Q9Y239 953 aa9.79□□□□□ -0.84
CDKN3-203ENST00000395577 IVNS1ABPQ9Y6Y0 642 aa9.79□□□□□ -0.84
CDKN3-203ENST00000395577 OXLD1Q5BKU9 147 aa9.78□□□□□ -0.84
CDKN3-203ENST00000395577 ANKMY2Q8IV38 441 aa9.78□□□□□ -0.84
CDKN3-203ENST00000395577 ZBTB24O43167 697 aaPredicted RBP9.77□□□□□ -0.85
CDKN3-203ENST00000395577 ATP1A2P50993 1020 aa9.77□□□□□ -0.85
CDKN3-203ENST00000395577 KCNC4Q03721 635 aa9.77□□□□□ -0.85
CDKN3-203ENST00000395577 NBPF20Q3BBV1 942 aa9.77□□□□□ -0.85
CDKN3-203ENST00000395577 NPM2Q86SE8 214 aaKnown RBP9.77□□□□□ -0.85
CDKN3-203ENST00000395577 CDCA7Q9BWT1 371 aaPredicted RBP9.77□□□□□ -0.85
CDKN3-203ENST00000395577 C1QTNF2Q9BXJ5 285 aa9.77□□□□□ -0.85
CDKN3-203ENST00000395577 DNAAF2Q9NVR5 837 aaKnown RBP9.77□□□□□ -0.85
CDKN3-203ENST00000395577 MFAP1P55081 439 aaKnown RBP9.76□□□□□ -0.85
CDKN3-203ENST00000395577 CLDN10P78369 228 aa9.76□□□□□ -0.85
CDKN3-203ENST00000395577 DPYDQ12882 1025 aa9.76□□□□□ -0.85
CDKN3-203ENST00000395577 ZNF594Q96JF6 807 aaPredicted RBP9.76□□□□□ -0.85
CDKN3-203ENST00000395577 CDV3Q9UKY7 258 aaKnown RBP9.75□□□□□ -0.85
CDKN3-203ENST00000395577 ESPNB1AK53 854 aa9.74□□□□□ -0.85
CDKN3-203ENST00000395577 RNF223E7ERA6 249 aa9.74□□□□□ -0.85
CDKN3-203ENST00000395577 RANGAP1P46060 587 aaPredicted RBP9.74□□□□□ -0.85
CDKN3-203ENST00000395577 TRMT44Q8IYL2 757 aaKnown RBP9.74□□□□□ -0.85
CDKN3-203ENST00000395577 LARGE2Q8N3Y3 721 aa9.74□□□□□ -0.85
CDKN3-203ENST00000395577 HCSTQ9UBK5 93 aa9.74□□□□□ -0.85
CDKN3-203ENST00000395577 GGCXP38435 758 aa9.73□□□□□ -0.85
CDKN3-203ENST00000395577 GTF2IP78347 998 aa9.73□□□□□ -0.85
CDKN3-203ENST00000395577 FAM69CQ0P6D2 419 aa9.73□□□□□ -0.85
CDKN3-203ENST00000395577 TRIM32Q13049 653 aa9.73□□□□□ -0.85
CDKN3-203ENST00000395577 CLP1Q92989 425 aaKnown RBP9.73□□□□□ -0.85
CDKN3-203ENST00000395577 PCDHB11Q9Y5F2 797 aa9.73□□□□□ -0.85
CDKN3-203ENST00000395577 ZBTB7BO15156 539 aaPredicted RBP9.72□□□□□ -0.85
CDKN3-203ENST00000395577 ITGBL1O95965 494 aaPredicted RBP9.72□□□□□ -0.85
CDKN3-203ENST00000395577 CCDC125Q86Z20 511 aa9.72□□□□□ -0.85
CDKN3-203ENST00000395577 SEPT12Q8IYM1 358 aa9.72□□□□□ -0.85
CDKN3-203ENST00000395577 ANKLE1Q8NAG6 615 aa9.72□□□□□ -0.85
CDKN3-203ENST00000395577 SIRT1Q96EB6 747 aa9.72□□□□□ -0.85
CDKN3-203ENST00000395577 PCDH10Q9P2E7 1040 aa9.72□□□□□ -0.85
CDKN3-203ENST00000395577 KIAA1024Q9UPX6 916 aa9.72□□□□□ -0.85
CDKN3-203ENST00000395577 GNEQ9Y223 722 aaKnown RBP9.72□□□□□ -0.85
CDKN3-203ENST00000395577 SSFA2P28290 1259 aa9.71□□□□□ -0.86
CDKN3-203ENST00000395577 RAB15P59190 212 aa9.71□□□□□ -0.86
CDKN3-203ENST00000395577 USP4Q13107 963 aa9.71□□□□□ -0.86
CDKN3-203ENST00000395577 PLA2G2CQ5R387 149 aa9.71□□□□□ -0.86
CDKN3-203ENST00000395577 SIX5Q8N196 739 aa9.71□□□□□ -0.86
CDKN3-203ENST00000395577 CCER1Q8TC90 406 aaPredicted RBP9.71□□□□□ -0.86
CDKN3-203ENST00000395577 SLAIN2Q9P270 581 aa9.71□□□□□ -0.86
CDKN3-203ENST00000395577 RBM19Q9Y4C8 960 aaKnown RBP9.71□□□□□ -0.86
CDKN3-203ENST00000395577 VARSP26640 1264 aaKnown RBP9.7□□□□□ -0.86
CDKN3-203ENST00000395577 SKOR1P84550 965 aa9.7□□□□□ -0.86
CDKN3-203ENST00000395577 SWI5Q1ZZU3 235 aa9.7□□□□□ -0.86
CDKN3-203ENST00000395577 CCDC102BQ68D86 513 aa9.7□□□□□ -0.86
CDKN3-203ENST00000395577 PHLDB3Q6NSJ2 640 aa9.7□□□□□ -0.86
CDKN3-203ENST00000395577 RGS22Q8NE09 1264 aa9.7□□□□□ -0.86
CDKN3-203ENST00000395577 KCTD15Q96SI1 283 aaPredicted RBP9.7□□□□□ -0.86
CDKN3-203ENST00000395577 DKK1O94907 266 aa9.69□□□□□ -0.86
CDKN3-203ENST00000395577 WNT7BP56706 349 aa9.69□□□□□ -0.86
CDKN3-203ENST00000395577 PSME1Q06323 249 aa9.69□□□□□ -0.86
CDKN3-203ENST00000395577 TPCN2Q8NHX9 752 aa9.69□□□□□ -0.86
CDKN3-203ENST00000395577 RNF166Q96A37 237 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms