RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 KDM4CQ9H3R0 1056 aa9.88□□□□□ -0.83
AP3S1-202ENST00000395548 LIMD1Q9UGP4 676 aa9.88□□□□□ -0.83
AP3S1-202ENST00000395548 PTPRTO14522 1441 aa9.88□□□□□ -0.83
AP3S1-202ENST00000395548 MYT1Q01538 1121 aa9.87□□□□□ -0.83
AP3S1-202ENST00000395548 KCNH2Q12809 1159 aa9.87□□□□□ -0.83
AP3S1-202ENST00000395548 RC3H1Q5TC82 1133 aaKnown RBP9.87□□□□□ -0.83
AP3S1-202ENST00000395548 LYPD8Q6UX82 237 aa9.87□□□□□ -0.83
AP3S1-202ENST00000395548 SNIP1Q8TAD8 396 aaKnown RBP9.87□□□□□ -0.83
AP3S1-202ENST00000395548 CABLES1Q8TDN4 633 aa9.87□□□□□ -0.83
AP3S1-202ENST00000395548 DDRGK1Q96HY6 314 aa9.87□□□□□ -0.83
AP3S1-202ENST00000395548 TNIKQ9UKE5 1360 aa9.87□□□□□ -0.83
AP3S1-202ENST00000395548 CFAP99D6REC4 459 aa9.86□□□□□ -0.83
AP3S1-202ENST00000395548 CLK2P49760 499 aaKnown RBP9.86□□□□□ -0.83
AP3S1-202ENST00000395548 MRGPRX2Q96LB1 330 aa9.86□□□□□ -0.83
AP3S1-202ENST00000395548 GPBP1L1Q9HC44 474 aaPredicted RBP9.86□□□□□ -0.83
AP3S1-202ENST00000395548 CUL7Q14999 1698 aa9.86□□□□□ -0.83
AP3S1-202ENST00000395548 ARAP3Q8WWN8 1544 aa9.86□□□□□ -0.83
AP3S1-202ENST00000395548 WRNQ14191 1432 aaPredicted RBP eCLIP9.85□□□□□ -0.83
AP3S1-202ENST00000395548 LILRB3O75022 631 aa9.85□□□□□ -0.83
AP3S1-202ENST00000395548 SKOR1P84550 965 aa9.85□□□□□ -0.83
AP3S1-202ENST00000395548 UNC93B1Q9H1C4 597 aa9.85□□□□□ -0.83
AP3S1-202ENST00000395548 POLR3EQ9NVU0 708 aa9.85□□□□□ -0.83
AP3S1-202ENST00000395548 RIMS1Q86UR5 1692 aaKnown RBP9.84□□□□□ -0.83
AP3S1-202ENST00000395548 CARMIL2Q6F5E8 1435 aa9.84□□□□□ -0.83
AP3S1-202ENST00000395548 UACAQ9BZF9 1416 aa9.84□□□□□ -0.83
AP3S1-202ENST00000395548 PHLDB1Q86UU1 1377 aa9.84□□□□□ -0.83
AP3S1-202ENST00000395548 CFAP43Q8NDM7 1665 aa9.83□□□□□ -0.84
AP3S1-202ENST00000395548 POGZQ7Z3K3 1410 aa9.83□□□□□ -0.84
AP3S1-202ENST00000395548 KDM5BQ9UGL1 1544 aa9.83□□□□□ -0.84
AP3S1-202ENST00000395548 LTBP4Q8N2S1 1624 aa9.83□□□□□ -0.84
AP3S1-202ENST00000395548 CTHP32929 405 aa9.83□□□□□ -0.84
AP3S1-202ENST00000395548 QPCTQ16769 361 aa9.83□□□□□ -0.84
AP3S1-202ENST00000395548 SKIV2LQ15477 1246 aaKnown RBP9.82□□□□□ -0.84
AP3S1-202ENST00000395548 HELBQ8NG08 1087 aaPredicted RBP9.82□□□□□ -0.84
AP3S1-202ENST00000395548 TSC1Q92574 1164 aa9.82□□□□□ -0.84
AP3S1-202ENST00000395548 FAM117AQ9C073 453 aa9.82□□□□□ -0.84
AP3S1-202ENST00000395548 WDR7Q9Y4E6 1490 aa9.82□□□□□ -0.84
AP3S1-202ENST00000395548 AVPP01185 164 aa9.81□□□□□ -0.84
AP3S1-202ENST00000395548 HSPA1LP34931 641 aa9.81□□□□□ -0.84
AP3S1-202ENST00000395548 SH3D19Q5HYK7 790 aa9.81□□□□□ -0.84
AP3S1-202ENST00000395548 ZNF787Q6DD87 383 aa9.81□□□□□ -0.84
AP3S1-202ENST00000395548 EHBP1Q8NDI1 1231 aa9.81□□□□□ -0.84
AP3S1-202ENST00000395548 SH3BP2P78314 561 aa9.8□□□□□ -0.84
AP3S1-202ENST00000395548 CTC1Q2NKJ3 1217 aa9.8□□□□□ -0.84
AP3S1-202ENST00000395548 BAP1Q92560 729 aa9.8□□□□□ -0.84
AP3S1-202ENST00000395548 RTL5Q5HYW3 569 aaPredicted RBP9.79□□□□□ -0.84
AP3S1-202ENST00000395548 CRIPAKQ8N1N5 446 aa9.79□□□□□ -0.84
AP3S1-202ENST00000395548 AAASQ9NRG9 546 aa9.79□□□□□ -0.84
AP3S1-202ENST00000395548 ATP1B4Q9UN42 357 aaPredicted RBP9.79□□□□□ -0.84
AP3S1-202ENST00000395548 STRCQ7RTU9 1775 aa9.78□□□□□ -0.84
AP3S1-202ENST00000395548 SMPD1P17405 629 aa9.78□□□□□ -0.84
AP3S1-202ENST00000395548 ZNF511Q8NB15 262 aa9.78□□□□□ -0.84
AP3S1-202ENST00000395548 SRCAPQ6ZRS2 3230 aa9.77□□□□□ -0.84
AP3S1-202ENST00000395548 J3QL48 77 aa9.77□□□□□ -0.85
AP3S1-202ENST00000395548 AXIN1O15169 862 aa9.77□□□□□ -0.85
AP3S1-202ENST00000395548 F12P00748 615 aaPredicted RBP9.77□□□□□ -0.85
AP3S1-202ENST00000395548 SMCPP49901 116 aaPredicted RBP9.77□□□□□ -0.85
AP3S1-202ENST00000395548 LINC01559Q495D7 138 aa9.77□□□□□ -0.85
AP3S1-202ENST00000395548 UHRF1BP1Q6BDS2 1440 aa9.76□□□□□ -0.85
AP3S1-202ENST00000395548 ST8SIA5O15466 376 aa9.76□□□□□ -0.85
AP3S1-202ENST00000395548 PER1O15534 1290 aaPredicted RBP9.76□□□□□ -0.85
AP3S1-202ENST00000395548 SIAH2O43255 324 aa9.76□□□□□ -0.85
AP3S1-202ENST00000395548 ALDH1A1P00352 501 aa9.76□□□□□ -0.85
AP3S1-202ENST00000395548 MAP10Q9P2G4 905 aa9.76□□□□□ -0.85
AP3S1-202ENST00000395548 PREX1Q8TCU6 1659 aa9.76□□□□□ -0.85
AP3S1-202ENST00000395548 PLEKHG3A1L390 1219 aa9.75□□□□□ -0.85
AP3S1-202ENST00000395548 RAPGEF3O95398 923 aa9.75□□□□□ -0.85
AP3S1-202ENST00000395548 VARSP26640 1264 aaKnown RBP9.75□□□□□ -0.85
AP3S1-202ENST00000395548 NEUROD2Q15784 382 aa9.75□□□□□ -0.85
AP3S1-202ENST00000395548 ARMC2Q8NEN0 867 aa9.75□□□□□ -0.85
AP3S1-202ENST00000395548 ZCCHC11Q5TAX3 1644 aaKnown RBP9.74□□□□□ -0.85
AP3S1-202ENST00000395548 TOM1O60784 492 aa9.74□□□□□ -0.85
AP3S1-202ENST00000395548 FANCAO15360 1455 aa9.73□□□□□ -0.85
AP3S1-202ENST00000395548 PROCA1Q8NCQ7 364 aaPredicted RBP9.73□□□□□ -0.85
AP3S1-202ENST00000395548 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.73□□□□□ -0.85
AP3S1-202ENST00000395548 WASF2Q9Y6W5 498 aa9.73□□□□□ -0.85
AP3S1-202ENST00000395548 PIP4K2BP78356 416 aa9.72□□□□□ -0.85
AP3S1-202ENST00000395548 PPP2R2DQ66LE6 453 aa9.72□□□□□ -0.85
AP3S1-202ENST00000395548 HPS1Q92902 700 aa9.71□□□□□ -0.86
AP3S1-202ENST00000395548 GOPCQ9HD26 462 aa9.71□□□□□ -0.86
AP3S1-202ENST00000395548 TTC37Q6PGP7 1564 aa9.71□□□□□ -0.86
AP3S1-202ENST00000395548 CTDSPL2Q05D32 466 aa9.7□□□□□ -0.86
AP3S1-202ENST00000395548 AGERQ15109 404 aa9.7□□□□□ -0.86
AP3S1-202ENST00000395548 TPRNQ4KMQ1 711 aa9.7□□□□□ -0.86
AP3S1-202ENST00000395548 NBPF14Q5TI25 921 aa9.7□□□□□ -0.86
AP3S1-202ENST00000395548 BPHLQ86WA6 291 aaPredicted RBP9.7□□□□□ -0.86
AP3S1-202ENST00000395548 MPNDQ8N594 471 aa9.7□□□□□ -0.86
AP3S1-202ENST00000395548 FAM174AQ8TBP5 190 aa9.7□□□□□ -0.86
AP3S1-202ENST00000395548 AKNAQ7Z591 1439 aa9.68□□□□□ -0.86
AP3S1-202ENST00000395548 MLECQ14165 292 aa9.68□□□□□ -0.86
AP3S1-202ENST00000395548 FOXJ1Q92949 421 aa9.68□□□□□ -0.86
AP3S1-202ENST00000395548 PCMTD1Q96MG8 357 aaPredicted RBP9.68□□□□□ -0.86
AP3S1-202ENST00000395548 ARHGEF40Q8TER5 1519 aa9.67□□□□□ -0.86
AP3S1-202ENST00000395548 RGS17Q9UGC6 210 aaPredicted RBP9.67□□□□□ -0.86
AP3S1-202ENST00000395548 DACH1Q9UI36 760 aa9.67□□□□□ -0.86
AP3S1-202ENST00000395548 NEO1Q92859 1461 aa9.66□□□□□ -0.86
AP3S1-202ENST00000395548 ZNF335Q9H4Z2 1342 aaPredicted RBP9.66□□□□□ -0.86
AP3S1-202ENST00000395548 POTECB2RU33 542 aa9.66□□□□□ -0.86
AP3S1-202ENST00000395548 AP1G2O75843 785 aa9.66□□□□□ -0.86
AP3S1-202ENST00000395548 IL27Q8NEV9 243 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms