RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 CARD11Q9BXL7 1154 aa27.44■■□□□ 1.98
COL11A2-204ENST00000395194 PARD3Q8TEW0 1356 aa27.43■■□□□ 1.98
COL11A2-204ENST00000395194 TTC21AQ8NDW8 1320 aa27.42■■□□□ 1.98
COL11A2-204ENST00000395194 ARHGEF25Q86VW2 580 aa27.42■■□□□ 1.98
COL11A2-204ENST00000395194 WDR17Q8IZU2 1322 aa27.41■■□□□ 1.98
COL11A2-204ENST00000395194 OVOS2A0A0G2JMS6 1433 aa27.41■■□□□ 1.98
COL11A2-204ENST00000395194 OVOS2A0A0J9YW53 1432 aa27.41■■□□□ 1.98
COL11A2-204ENST00000395194 OVOS2Q6IE36 1432 aa27.41■■□□□ 1.98
COL11A2-204ENST00000395194 NFAT5O94916 1531 aa27.41■■□□□ 1.98
COL11A2-204ENST00000395194 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.41■■□□□ 1.98
COL11A2-204ENST00000395194 DDB1Q16531 1140 aa27.4■■□□□ 1.98
COL11A2-204ENST00000395194 KCNH5Q8NCM2 988 aa27.4■■□□□ 1.98
COL11A2-204ENST00000395194 TONSLQ96HA7 1378 aa27.39■■□□□ 1.98
COL11A2-204ENST00000395194 CSB-PGBD3P0DP91 1061 aa27.39■■□□□ 1.98
COL11A2-204ENST00000395194 SBNO2Q9Y2G9 1366 aa27.38■■□□□ 1.97
COL11A2-204ENST00000395194 TMC1Q8TDI8 760 aa27.37■■□□□ 1.97
COL11A2-204ENST00000395194 LTN1O94822 1766 aa27.36■■□□□ 1.97
COL11A2-204ENST00000395194 CD163L1Q9NR16 1453 aa27.36■■□□□ 1.97
COL11A2-204ENST00000395194 NME9Q86XW9 330 aa27.34■■□□□ 1.97
COL11A2-204ENST00000395194 USP54Q70EL1 1684 aa27.33■■□□□ 1.97
COL11A2-204ENST00000395194 PTF1AQ7RTS3 328 aa27.33■■□□□ 1.97
COL11A2-204ENST00000395194 NBPF14Q5TI25 921 aa27.32■■□□□ 1.96
COL11A2-204ENST00000395194 MARCH10Q8NA82 808 aaPredicted RBP27.32■■□□□ 1.96
COL11A2-204ENST00000395194 CARD10Q9BWT7 1032 aa27.31■■□□□ 1.96
COL11A2-204ENST00000395194 SLC12A5Q9H2X9 1139 aa27.31■■□□□ 1.96
COL11A2-204ENST00000395194 RGPD3A6NKT7 1758 aaPredicted RBP27.3■■□□□ 1.96
COL11A2-204ENST00000395194 RGPD4Q7Z3J3 1758 aa27.3■■□□□ 1.96
COL11A2-204ENST00000395194 C11orf95C9JLR9 678 aaPredicted RBP27.3■■□□□ 1.96
COL11A2-204ENST00000395194 ABCC6O95255 1503 aa27.28■■□□□ 1.96
COL11A2-204ENST00000395194 USP31Q70CQ4 1352 aa27.28■■□□□ 1.96
COL11A2-204ENST00000395194 HDGFL2Q7Z4V5 671 aaPredicted RBP27.28■■□□□ 1.96
COL11A2-204ENST00000395194 CDCA7Q9BWT1 371 aaPredicted RBP27.28■■□□□ 1.96
COL11A2-204ENST00000395194 KAT6BQ8WYB5 2073 aa27.26■■□□□ 1.95
COL11A2-204ENST00000395194 A0A1W2PP64 1363 aa27.26■■□□□ 1.95
COL11A2-204ENST00000395194 CCDC7Q96M83 1385 aa27.25■■□□□ 1.95
COL11A2-204ENST00000395194 BCL11BQ9C0K0 894 aaPredicted RBP27.25■■□□□ 1.95
COL11A2-204ENST00000395194 EDC4Q6P2E9 1401 aaKnown RBP27.24■■□□□ 1.95
COL11A2-204ENST00000395194 NLRP2Q9NX02 1062 aa27.23■■□□□ 1.95
COL11A2-204ENST00000395194 TNS2Q63HR2 1409 aa27.23■■□□□ 1.95
COL11A2-204ENST00000395194 ERBB3P21860 1342 aa27.22■■□□□ 1.95
COL11A2-204ENST00000395194 EXOC5O00471 708 aa27.22■■□□□ 1.95
COL11A2-204ENST00000395194 ANO8Q9HCE9 1232 aaPredicted RBP27.22■■□□□ 1.95
COL11A2-204ENST00000395194 TERF2IPQ9NYB0 399 aa27.22■■□□□ 1.95
COL11A2-204ENST00000395194 PLSCR1O15162 318 aa27.21■■□□□ 1.95
COL11A2-204ENST00000395194 BCL9O00512 1426 aa27.19■■□□□ 1.94
COL11A2-204ENST00000395194 ST20-MTHFSA0A0A6YYL1 179 aa27.19■■□□□ 1.94
COL11A2-204ENST00000395194 ANKRD24Q8TF21 1146 aa27.18■■□□□ 1.94
COL11A2-204ENST00000395194 TESK2Q96S53 571 aa27.17■■□□□ 1.94
COL11A2-204ENST00000395194 NHSQ6T4R5 1651 aa27.17■■□□□ 1.94
COL11A2-204ENST00000395194 KCNQ2O43526 872 aa27.16■■□□□ 1.94
COL11A2-204ENST00000395194 PROM2Q8N271 834 aa27.16■■□□□ 1.94
COL11A2-204ENST00000395194 ACSBG1Q96GR2 724 aa27.16■■□□□ 1.94
COL11A2-204ENST00000395194 CASZ1Q86V15 1759 aa27.16■■□□□ 1.94
COL11A2-204ENST00000395194 SPON1Q9HCB6 807 aa27.15■■□□□ 1.94
COL11A2-204ENST00000395194 PPP1R1BQ9UD71 204 aaPredicted RBP27.15■■□□□ 1.94
COL11A2-204ENST00000395194 IL2RBP14784 551 aa27.13■■□□□ 1.93
COL11A2-204ENST00000395194 LTV1Q96GA3 475 aaPredicted RBP27.13■■□□□ 1.93
COL11A2-204ENST00000395194 PDGFDQ9GZP0 370 aaPredicted RBP27.13■■□□□ 1.93
COL11A2-204ENST00000395194 TXNRD1Q16881 649 aa27.12■■□□□ 1.93
COL11A2-204ENST00000395194 PUS7Q96PZ0 661 aaKnown RBP27.12■■□□□ 1.93
COL11A2-204ENST00000395194 RGPD2P0DJD1 1756 aa27.11■■□□□ 1.93
COL11A2-204ENST00000395194 BTAF1O14981 1849 aa27.11■■□□□ 1.93
COL11A2-204ENST00000395194 FAM208AQ9UK61 1670 aaKnown RBP27.1■■□□□ 1.93
COL11A2-204ENST00000395194 FBLN1P23142 703 aa27.09■■□□□ 1.93
COL11A2-204ENST00000395194 TRIM26Q12899 539 aaPredicted RBP27.09■■□□□ 1.93
COL11A2-204ENST00000395194 NINLQ9Y2I6 1382 aa27.09■■□□□ 1.93
COL11A2-204ENST00000395194 COG3Q96JB2 828 aa27.08■■□□□ 1.93
COL11A2-204ENST00000395194 IP6K1Q92551 441 aa27.07■■□□□ 1.92
COL11A2-204ENST00000395194 ZBTB7AO95365 584 aa27.06■■□□□ 1.92
COL11A2-204ENST00000395194 STK32BQ9NY57 414 aa27.06■■□□□ 1.92
COL11A2-204ENST00000395194 USP47Q96K76 1375 aa27.05■■□□□ 1.92
COL11A2-204ENST00000395194 MAP3K19Q56UN5 1328 aa27.04■■□□□ 1.92
COL11A2-204ENST00000395194 MYOM1P52179 1685 aa27.04■■□□□ 1.92
COL11A2-204ENST00000395194 ANKRD36BQ8N2N9 1353 aa27.03■■□□□ 1.92
COL11A2-204ENST00000395194 AMPHP49418 695 aa27.02■■□□□ 1.92
COL11A2-204ENST00000395194 SLC15A2Q16348 729 aa27.02■■□□□ 1.92
COL11A2-204ENST00000395194 HOXC9P31274 260 aa27.01■■□□□ 1.91
COL11A2-204ENST00000395194 DDX54Q8TDD1 881 aaKnown RBP27.01■■□□□ 1.91
COL11A2-204ENST00000395194 ATF5Q9Y2D1 282 aaPredicted RBP27.01■■□□□ 1.91
COL11A2-204ENST00000395194 KIF20BQ96Q89 1820 aa27■■□□□ 1.91
COL11A2-204ENST00000395194 PAPPAQ13219 1627 aa26.99■■□□□ 1.91
COL11A2-204ENST00000395194 TMF1P82094 1093 aa26.99■■□□□ 1.91
COL11A2-204ENST00000395194 SHANK3Q9BYB0 1731 aa26.99■■□□□ 1.91
COL11A2-204ENST00000395194 RRS1Q15050 365 aaKnown RBP26.98■■□□□ 1.91
COL11A2-204ENST00000395194 GGNBP2Q9H3C7 697 aa26.98■■□□□ 1.91
COL11A2-204ENST00000395194 DOT1LQ8TEK3 1739 aa26.98■■□□□ 1.91
COL11A2-204ENST00000395194 SLC24A1O60721 1099 aa26.97■■□□□ 1.91
COL11A2-204ENST00000395194 MEGF6O75095 1541 aa26.95■■□□□ 1.9
COL11A2-204ENST00000395194 FYB1O15117 783 aa26.94■■□□□ 1.9
COL11A2-204ENST00000395194 PTGER2P43116 358 aa26.94■■□□□ 1.9
COL11A2-204ENST00000395194 SYTL4Q96C24 671 aaPredicted RBP26.93■■□□□ 1.9
COL11A2-204ENST00000395194 ZNF827Q17R98 1081 aa26.92■■□□□ 1.9
COL11A2-204ENST00000395194 USHBP1Q8N6Y0 703 aa26.92■■□□□ 1.9
COL11A2-204ENST00000395194 LRRC4BQ9NT99 713 aa26.92■■□□□ 1.9
COL11A2-204ENST00000395194 YY1P25490 414 aa26.91■■□□□ 1.9
COL11A2-204ENST00000395194 RTL1A6NKG5 1358 aa26.91■■□□□ 1.9
COL11A2-204ENST00000395194 DCAF8L1A6NGE4 600 aa26.9■■□□□ 1.9
COL11A2-204ENST00000395194 MTFR1LQ9H019 292 aa26.89■■□□□ 1.9
COL11A2-204ENST00000395194 TUBGCP6Q96RT7 1819 aa26.88■■□□□ 1.89
COL11A2-204ENST00000395194 NBPF6Q5VWK0 638 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms