RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 U2AF1Q01081 240 aaKnown RBP eCLIP32.45■■■□□ 2.79
CTF1-202ENST00000395019 RRS1Q15050 365 aaKnown RBP32.45■■■□□ 2.79
CTF1-202ENST00000395019 RUNDC1Q96C34 613 aa32.45■■■□□ 2.79
CTF1-202ENST00000395019 LRP6O75581 1613 aa32.45■■■□□ 2.79
CTF1-202ENST00000395019 NUTM2BA6NNL0 878 aaPredicted RBP32.44■■■□□ 2.78
CTF1-202ENST00000395019 NUTM2EB1AL46 878 aaPredicted RBP32.44■■■□□ 2.78
CTF1-202ENST00000395019 APAF1O14727 1248 aa32.44■■■□□ 2.78
CTF1-202ENST00000395019 ZC3H6P61129 1189 aaKnown RBP32.44■■■□□ 2.78
CTF1-202ENST00000395019 NUTM2AQ8IVF1 878 aaPredicted RBP32.44■■■□□ 2.78
CTF1-202ENST00000395019 RGPD5Q99666 1765 aa32.43■■■□□ 2.78
CTF1-202ENST00000395019 PPM1GO15355 546 aaPredicted RBP32.43■■■□□ 2.78
CTF1-202ENST00000395019 KCNH5Q8NCM2 988 aa32.41■■■□□ 2.78
CTF1-202ENST00000395019 COL18A1P39060 1754 aa32.41■■■□□ 2.78
CTF1-202ENST00000395019 ZNF521Q96K83 1311 aa32.4■■■□□ 2.78
CTF1-202ENST00000395019 HAP1P54257 671 aaPredicted RBP32.4■■■□□ 2.78
CTF1-202ENST00000395019 KIAA0232Q92628 1395 aa32.4■■■□□ 2.78
CTF1-202ENST00000395019 U2SURPO15042 1029 aaKnown RBP32.4■■■□□ 2.78
CTF1-202ENST00000395019 MAP3K19Q56UN5 1328 aa32.39■■■□□ 2.78
CTF1-202ENST00000395019 ZBTB7CA1YPR0 619 aa32.37■■■□□ 2.77
CTF1-202ENST00000395019 SPATA31A6Q5VVP1 1343 aa32.37■■■□□ 2.77
CTF1-202ENST00000395019 ADAMTS2O95450 1211 aa32.37■■■□□ 2.77
CTF1-202ENST00000395019 ILDR1Q86SU0 546 aaPredicted RBP32.37■■■□□ 2.77
CTF1-202ENST00000395019 ARHGEF25Q86VW2 580 aa32.37■■■□□ 2.77
CTF1-202ENST00000395019 IL13P35225 146 aa32.35■■■□□ 2.77
CTF1-202ENST00000395019 CHRNA2Q15822 529 aa32.35■■■□□ 2.77
CTF1-202ENST00000395019 SUPT16HQ9Y5B9 1047 aaKnown RBP32.35■■■□□ 2.77
CTF1-202ENST00000395019 CPDO75976 1380 aa32.35■■■□□ 2.77
CTF1-202ENST00000395019 NCBP3Q53F19 620 aaKnown RBP32.34■■■□□ 2.77
CTF1-202ENST00000395019 LMO7Q8WWI1 1683 aa32.34■■■□□ 2.77
CTF1-202ENST00000395019 PLCH1Q4KWH8 1693 aa32.33■■■□□ 2.77
CTF1-202ENST00000395019 TCP11L2Q8N4U5 519 aa32.33■■■□□ 2.77
CTF1-202ENST00000395019 CDCA7LQ96GN5 454 aa32.33■■■□□ 2.77
CTF1-202ENST00000395019 PLEKHF1Q96S99 279 aa32.33■■■□□ 2.77
CTF1-202ENST00000395019 PNNQ9H307 717 aaKnown RBP32.33■■■□□ 2.77
CTF1-202ENST00000395019 COL14A1Q05707 1796 aaKnown RBP32.31■■■□□ 2.76
CTF1-202ENST00000395019 FAM83GA6ND36 823 aa32.3■■■□□ 2.76
CTF1-202ENST00000395019 FCHSD2O94868 740 aa32.29■■■□□ 2.76
CTF1-202ENST00000395019 GOLGA2Q08379 1002 aa32.29■■■□□ 2.76
CTF1-202ENST00000395019 PRDM11Q9NQV5 511 aa32.29■■■□□ 2.76
CTF1-202ENST00000395019 AXIN2Q9Y2T1 843 aa32.29■■■□□ 2.76
CTF1-202ENST00000395019 NEFLP07196 543 aa32.28■■■□□ 2.76
CTF1-202ENST00000395019 CAMTA1Q9Y6Y1 1673 aa32.27■■■□□ 2.76
CTF1-202ENST00000395019 HOXC9P31274 260 aa32.26■■■□□ 2.76
CTF1-202ENST00000395019 AMPHP49418 695 aa32.26■■■□□ 2.75
CTF1-202ENST00000395019 CCDC27Q2M243 656 aa32.26■■■□□ 2.75
CTF1-202ENST00000395019 PHF23Q9BUL5 403 aaPredicted RBP32.26■■■□□ 2.75
CTF1-202ENST00000395019 KIF24Q5T7B8 1368 aa32.25■■■□□ 2.75
CTF1-202ENST00000395019 RGPD2P0DJD1 1756 aa32.25■■■□□ 2.75
CTF1-202ENST00000395019 HSP90AB2PQ58FF8 381 aa32.25■■■□□ 2.75
CTF1-202ENST00000395019 RSPH6AQ9H0K4 717 aa32.25■■■□□ 2.75
CTF1-202ENST00000395019 FLT4P35916 1363 aa32.25■■■□□ 2.75
CTF1-202ENST00000395019 NRAPQ86VF7 1730 aa32.23■■■□□ 2.75
CTF1-202ENST00000395019 WWC1Q8IX03 1113 aa32.23■■■□□ 2.75
CTF1-202ENST00000395019 MAPK8IP3Q9UPT6 1336 aa32.23■■■□□ 2.75
CTF1-202ENST00000395019 RTL1A6NKG5 1358 aa32.23■■■□□ 2.75
CTF1-202ENST00000395019 ABCC6O95255 1503 aa32.23■■■□□ 2.75
CTF1-202ENST00000395019 EIF4A2Q14240 407 aaKnown RBP32.22■■■□□ 2.75
CTF1-202ENST00000395019 IP6K1Q92551 441 aa32.22■■■□□ 2.75
CTF1-202ENST00000395019 SLFN5Q08AF3 891 aa32.22■■■□□ 2.75
CTF1-202ENST00000395019 C8orf37Q96NL8 207 aa32.22■■■□□ 2.75
CTF1-202ENST00000395019 RRP7AQ9Y3A4 280 aaKnown RBP32.22■■■□□ 2.75
CTF1-202ENST00000395019 NWD2Q9ULI1 1742 aa32.2■■■□□ 2.75
CTF1-202ENST00000395019 FKBP8Q14318 412 aa32.19■■■□□ 2.74
CTF1-202ENST00000395019 TRMT2AQ8IZ69 625 aaKnown RBP32.19■■■□□ 2.74
CTF1-202ENST00000395019 NEUROD2Q15784 382 aa32.18■■■□□ 2.74
CTF1-202ENST00000395019 DUSP27Q5VZP5 1158 aa32.18■■■□□ 2.74
CTF1-202ENST00000395019 PRKAR2BP31323 418 aa32.18■■■□□ 2.74
CTF1-202ENST00000395019 TMPOP42166 694 aaKnown RBP32.18■■■□□ 2.74
CTF1-202ENST00000395019 SLIT2O94813 1529 aa32.18■■■□□ 2.74
CTF1-202ENST00000395019 COL5A2P05997 1499 aaPredicted RBP32.18■■■□□ 2.74
CTF1-202ENST00000395019 E9PSI1 815 aa32.17■■■□□ 2.74
CTF1-202ENST00000395019 MEX3CQ5U5Q3 659 aaKnown RBP32.17■■■□□ 2.74
CTF1-202ENST00000395019 BTG4Q9NY30 223 aa32.17■■■□□ 2.74
CTF1-202ENST00000395019 RNF123Q5XPI4 1314 aa32.16■■■□□ 2.74
CTF1-202ENST00000395019 HMOX1P09601 288 aa32.16■■■□□ 2.74
CTF1-202ENST00000395019 WDR63Q8IWG1 891 aa32.16■■■□□ 2.74
CTF1-202ENST00000395019 LTV1Q96GA3 475 aaPredicted RBP32.16■■■□□ 2.74
CTF1-202ENST00000395019 NEFMP07197 916 aa32.15■■■□□ 2.74
CTF1-202ENST00000395019 RGPD1P0DJD0 1748 aa32.14■■■□□ 2.74
CTF1-202ENST00000395019 NGLY1Q96IV0 654 aa32.14■■■□□ 2.74
CTF1-202ENST00000395019 RCAN3Q9UKA8 241 aa32.13■■■□□ 2.73
CTF1-202ENST00000395019 SPINK5Q9NQ38 1064 aaPredicted RBP32.12■■■□□ 2.73
CTF1-202ENST00000395019 ANKRD24Q8TF21 1146 aa32.11■■■□□ 2.73
CTF1-202ENST00000395019 ERBB3P21860 1342 aa32.11■■■□□ 2.73
CTF1-202ENST00000395019 BCL9LQ86UU0 1499 aa32.11■■■□□ 2.73
CTF1-202ENST00000395019 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.11■■■□□ 2.73
CTF1-202ENST00000395019 STRN4Q9NRL3 753 aa32.1■■■□□ 2.73
CTF1-202ENST00000395019 FAM208AQ9UK61 1670 aaKnown RBP32.1■■■□□ 2.73
CTF1-202ENST00000395019 FNBP4Q8N3X1 1017 aaPredicted RBP32.08■■■□□ 2.73
CTF1-202ENST00000395019 PHACTR3Q96KR7 559 aa32.08■■■□□ 2.73
CTF1-202ENST00000395019 TRIM35Q9UPQ4 493 aa32.08■■■□□ 2.73
CTF1-202ENST00000395019 AFF2P51816 1311 aa32.07■■■□□ 2.72
CTF1-202ENST00000395019 RIPK4P57078 832 aa32.07■■■□□ 2.72
CTF1-202ENST00000395019 SULT6B1Q6IMI4 303 aa32.07■■■□□ 2.72
CTF1-202ENST00000395019 NFE2L2Q16236 605 aa32.06■■■□□ 2.72
CTF1-202ENST00000395019 LARP1Q6PKG0 1096 aaKnown RBP32.06■■■□□ 2.72
CTF1-202ENST00000395019 AEBP1Q8IUX7 1158 aa32.04■■■□□ 2.72
CTF1-202ENST00000395019 WDR17Q8IZU2 1322 aa32.04■■■□□ 2.72
CTF1-202ENST00000395019 IGSF1Q8N6C5 1336 aa32.04■■■□□ 2.72
CTF1-202ENST00000395019 EVA1CP58658 441 aa32.03■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms