RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 CDCA8Q53HL2 280 aa11.24□□□□□ -0.61
GAPVD1-204ENST00000394083 KDRP35968 1356 aa11.23□□□□□ -0.61
GAPVD1-204ENST00000394083 SCN11AQ9UI33 1791 aa11.23□□□□□ -0.61
GAPVD1-204ENST00000394083 RUNDC1Q96C34 613 aa11.23□□□□□ -0.61
GAPVD1-204ENST00000394083 MSH6P52701 1360 aa11.23□□□□□ -0.61
GAPVD1-204ENST00000394083 TTC21BQ7Z4L5 1316 aa11.23□□□□□ -0.61
GAPVD1-204ENST00000394083 TOGARAM1Q9Y4F4 1720 aa11.22□□□□□ -0.61
GAPVD1-204ENST00000394083 SIRT2Q8IXJ6 389 aa11.22□□□□□ -0.61
GAPVD1-204ENST00000394083 HMOX1P09601 288 aa11.22□□□□□ -0.61
GAPVD1-204ENST00000394083 EIF4A2Q14240 407 aaKnown RBP11.22□□□□□ -0.61
GAPVD1-204ENST00000394083 MAP3K19Q56UN5 1328 aa11.21□□□□□ -0.61
GAPVD1-204ENST00000394083 CACNA1FO60840 1977 aa11.21□□□□□ -0.61
GAPVD1-204ENST00000394083 CENPFP49454 3210 aa11.21□□□□□ -0.62
GAPVD1-204ENST00000394083 CCDC61Q9Y6R9 512 aa11.2□□□□□ -0.62
GAPVD1-204ENST00000394083 PMFBP1Q8TBY8 1022 aa11.2□□□□□ -0.62
GAPVD1-204ENST00000394083 SSH1Q8WYL5 1049 aa11.2□□□□□ -0.62
GAPVD1-204ENST00000394083 TBX22Q9Y458 520 aa11.2□□□□□ -0.62
GAPVD1-204ENST00000394083 LMTK3Q96Q04 1460 aa11.19□□□□□ -0.62
GAPVD1-204ENST00000394083 TRIM27P14373 513 aa11.18□□□□□ -0.62
GAPVD1-204ENST00000394083 C8orf58Q8NAV2 365 aa11.18□□□□□ -0.62
GAPVD1-204ENST00000394083 BACH2Q9BYV9 841 aa11.18□□□□□ -0.62
GAPVD1-204ENST00000394083 DNAJC5Q9H3Z4 198 aa11.18□□□□□ -0.62
GAPVD1-204ENST00000394083 BRCA2P51587 3418 aa11.18□□□□□ -0.62
GAPVD1-204ENST00000394083 ATP10DQ9P241 1426 aa11.18□□□□□ -0.62
GAPVD1-204ENST00000394083 PKD1L3Q7Z443 1732 aa11.18□□□□□ -0.62
GAPVD1-204ENST00000394083 PDE4AP27815 886 aa11.17□□□□□ -0.62
GAPVD1-204ENST00000394083 EXOSC9Q06265 439 aaKnown RBP11.17□□□□□ -0.62
GAPVD1-204ENST00000394083 PRKAR2BP31323 418 aa11.17□□□□□ -0.62
GAPVD1-204ENST00000394083 POGKQ9P215 609 aa11.17□□□□□ -0.62
GAPVD1-204ENST00000394083 UBR2Q8IWV8 1755 aa11.17□□□□□ -0.62
GAPVD1-204ENST00000394083 COG6Q9Y2V7 657 aa11.17□□□□□ -0.62
GAPVD1-204ENST00000394083 MST1RQ04912 1400 aa11.16□□□□□ -0.62
GAPVD1-204ENST00000394083 DDX17Q92841 729 aaKnown RBP11.16□□□□□ -0.62
GAPVD1-204ENST00000394083 PLPPR3Q6T4P5 718 aa11.16□□□□□ -0.62
GAPVD1-204ENST00000394083 AXIN2Q9Y2T1 843 aa11.16□□□□□ -0.62
GAPVD1-204ENST00000394083 U2AF1L5P0DN76 240 aaPredicted RBP11.16□□□□□ -0.62
GAPVD1-204ENST00000394083 U2AF1Q01081 240 aaKnown RBP eCLIP11.16□□□□□ -0.622e-9■□□□□ 11.3
GAPVD1-204ENST00000394083 AK9Q5TCS8 1911 aa11.16□□□□□ -0.62
GAPVD1-204ENST00000394083 CASZ1Q86V15 1759 aa11.16□□□□□ -0.62
GAPVD1-204ENST00000394083 VAMP4O75379 141 aa11.16□□□□□ -0.62
GAPVD1-204ENST00000394083 WDR43Q15061 677 aaKnown RBP eCLIP11.16□□□□□ -0.62
GAPVD1-204ENST00000394083 E9PSI1 815 aa11.15□□□□□ -0.62
GAPVD1-204ENST00000394083 WDR63Q8IWG1 891 aa11.15□□□□□ -0.62
GAPVD1-204ENST00000394083 MBIPQ9NS73 344 aa11.15□□□□□ -0.62
GAPVD1-204ENST00000394083 ADGRL3Q9HAR2 1447 aa11.14□□□□□ -0.63
GAPVD1-204ENST00000394083 NCBP3Q53F19 620 aaKnown RBP11.14□□□□□ -0.63
GAPVD1-204ENST00000394083 ORAI2Q96SN7 254 aa11.14□□□□□ -0.63
GAPVD1-204ENST00000394083 PAPPAQ13219 1627 aa11.14□□□□□ -0.63
GAPVD1-204ENST00000394083 KDM4FA0A1W2PPD8 638 aa11.14□□□□□ -0.63
GAPVD1-204ENST00000394083 ANKARQ7Z5J8 1434 aa11.13□□□□□ -0.63
GAPVD1-204ENST00000394083 IGSF1Q8N6C5 1336 aa11.12□□□□□ -0.63
GAPVD1-204ENST00000394083 CCDC136Q96JN2 1154 aa11.12□□□□□ -0.63
GAPVD1-204ENST00000394083 NUTM2GQ5VZR2 741 aa11.11□□□□□ -0.63
GAPVD1-204ENST00000394083 CLUAP1Q96AJ1 413 aa11.11□□□□□ -0.63
GAPVD1-204ENST00000394083 EYA1Q99502 592 aa11.11□□□□□ -0.63
GAPVD1-204ENST00000394083 TCERG1O14776 1098 aaKnown RBP11.11□□□□□ -0.63
GAPVD1-204ENST00000394083 TJP1Q07157 1748 aa11.11□□□□□ -0.63
GAPVD1-204ENST00000394083 RIPK4P57078 832 aa11.11□□□□□ -0.63
GAPVD1-204ENST00000394083 NUP188Q5SRE5 1749 aa11.11□□□□□ -0.63
GAPVD1-204ENST00000394083 DIAPH1O60610 1272 aaKnown RBP11.1□□□□□ -0.63
GAPVD1-204ENST00000394083 MCM10Q7L590 875 aa11.1□□□□□ -0.63
GAPVD1-204ENST00000394083 MIS18AQ9NYP9 233 aa11.1□□□□□ -0.63
GAPVD1-204ENST00000394083 WNK3Q9BYP7 1800 aa11.1□□□□□ -0.63
GAPVD1-204ENST00000394083 NHSL1Q5SYE7 1610 aa11.1□□□□□ -0.63
GAPVD1-204ENST00000394083 MTHFSDQ2M296 383 aaKnown RBP11.1□□□□□ -0.63
GAPVD1-204ENST00000394083 ZBTB40Q9NUA8 1239 aa11.1□□□□□ -0.63
GAPVD1-204ENST00000394083 NPHP4O75161 1426 aaPredicted RBP11.1□□□□□ -0.63
GAPVD1-204ENST00000394083 COL16A1Q07092 1604 aaPredicted RBP11.1□□□□□ -0.63
GAPVD1-204ENST00000394083 TERF2IPQ9NYB0 399 aa11.1□□□□□ -0.63
GAPVD1-204ENST00000394083 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.09□□□□□ -0.63
GAPVD1-204ENST00000394083 FCHSD2O94868 740 aa11.09□□□□□ -0.63
GAPVD1-204ENST00000394083 U2SURPO15042 1029 aaKnown RBP11.09□□□□□ -0.63
GAPVD1-204ENST00000394083 KIF1AQ12756 1690 aa11.09□□□□□ -0.63
GAPVD1-204ENST00000394083 TMEM57Q8N5G2 664 aa11.09□□□□□ -0.63
GAPVD1-204ENST00000394083 NOB1Q9ULX3 412 aaKnown RBP11.09□□□□□ -0.63
GAPVD1-204ENST00000394083 C1orf167Q5SNV9 1468 aa11.08□□□□□ -0.64
GAPVD1-204ENST00000394083 MRPL50Q8N5N7 158 aaKnown RBP11.08□□□□□ -0.64
GAPVD1-204ENST00000394083 ITGB4P16144 1822 aa11.08□□□□□ -0.64
GAPVD1-204ENST00000394083 BRPF1P55201 1214 aaPredicted RBP11.08□□□□□ -0.64
GAPVD1-204ENST00000394083 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.08□□□□□ -0.64
GAPVD1-204ENST00000394083 PARP4Q9UKK3 1724 aaKnown RBP11.08□□□□□ -0.64
GAPVD1-204ENST00000394083 NEFLP07196 543 aa11.07□□□□□ -0.64
GAPVD1-204ENST00000394083 STAG3Q9UJ98 1225 aa11.07□□□□□ -0.64
GAPVD1-204ENST00000394083 CEMIPQ8WUJ3 1361 aa11.07□□□□□ -0.64
GAPVD1-204ENST00000394083 ABCC4O15439 1325 aa11.07□□□□□ -0.64
GAPVD1-204ENST00000394083 ZBTB7BO15156 539 aaPredicted RBP11.07□□□□□ -0.64
GAPVD1-204ENST00000394083 G2E3Q7L622 706 aa11.07□□□□□ -0.64
GAPVD1-204ENST00000394083 IL17REQ8NFR9 667 aa11.07□□□□□ -0.64
GAPVD1-204ENST00000394083 COL4A1P02462 1669 aa11.07□□□□□ -0.64
GAPVD1-204ENST00000394083 NFE2L2Q16236 605 aa11.07□□□□□ -0.64
GAPVD1-204ENST00000394083 TRHP20396 242 aaPredicted RBP11.07□□□□□ -0.64
GAPVD1-204ENST00000394083 HOXC9P31274 260 aa11.06□□□□□ -0.64
GAPVD1-204ENST00000394083 XPCQ01831 940 aaPredicted RBP11.06□□□□□ -0.64
GAPVD1-204ENST00000394083 PPM1GO15355 546 aaPredicted RBP11.06□□□□□ -0.64
GAPVD1-204ENST00000394083 PDE3AQ14432 1141 aa11.06□□□□□ -0.64
GAPVD1-204ENST00000394083 SULT6B1Q6IMI4 303 aa11.06□□□□□ -0.64
GAPVD1-204ENST00000394083 USHBP1Q8N6Y0 703 aa11.06□□□□□ -0.64
GAPVD1-204ENST00000394083 MEGF6O75095 1541 aa11.06□□□□□ -0.64
GAPVD1-204ENST00000394083 ARFGEF2Q9Y6D5 1785 aa11.06□□□□□ -0.64
GAPVD1-204ENST00000394083 CHL1O00533 1208 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms