RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 PTF1AQ7RTS3 328 aa26.57■■□□□ 1.84
SNCB-202ENST00000393693 ARHGEF25Q86VW2 580 aa26.57■■□□□ 1.84
SNCB-202ENST00000393693 ZNF692Q9BU19 519 aaPredicted RBP26.57■■□□□ 1.84
SNCB-202ENST00000393693 WDR17Q8IZU2 1322 aa26.57■■□□□ 1.84
SNCB-202ENST00000393693 PEAK1Q9H792 1746 aa26.56■■□□□ 1.84
SNCB-202ENST00000393693 CPSF1Q10570 1443 aaKnown RBP26.56■■□□□ 1.84
SNCB-202ENST00000393693 LRRC37A3O60309 1634 aa26.55■■□□□ 1.84
SNCB-202ENST00000393693 C11orf95C9JLR9 678 aaPredicted RBP26.54■■□□□ 1.84
SNCB-202ENST00000393693 MARCH10Q8NA82 808 aaPredicted RBP26.53■■□□□ 1.84
SNCB-202ENST00000393693 KCNH5Q8NCM2 988 aa26.53■■□□□ 1.84
SNCB-202ENST00000393693 CSB-PGBD3P0DP91 1061 aa26.51■■□□□ 1.83
SNCB-202ENST00000393693 TTC21AQ8NDW8 1320 aa26.5■■□□□ 1.83
SNCB-202ENST00000393693 PLSCR1O15162 318 aa26.5■■□□□ 1.83
SNCB-202ENST00000393693 KTN1Q86UP2 1357 aaKnown RBP26.49■■□□□ 1.83
SNCB-202ENST00000393693 AKAP12Q02952 1782 aa26.49■■□□□ 1.83
SNCB-202ENST00000393693 BCL11BQ9C0K0 894 aaPredicted RBP26.49■■□□□ 1.83
SNCB-202ENST00000393693 CARD10Q9BWT7 1032 aa26.48■■□□□ 1.83
SNCB-202ENST00000393693 ANO8Q9HCE9 1232 aaPredicted RBP26.48■■□□□ 1.83
SNCB-202ENST00000393693 CDCA7Q9BWT1 371 aaPredicted RBP26.47■■□□□ 1.83
SNCB-202ENST00000393693 SPON1Q9HCB6 807 aa26.47■■□□□ 1.83
SNCB-202ENST00000393693 RGPD5Q99666 1765 aa26.47■■□□□ 1.83
SNCB-202ENST00000393693 SBF2Q86WG5 1849 aa26.46■■□□□ 1.83
SNCB-202ENST00000393693 KCNQ2O43526 872 aa26.46■■□□□ 1.83
SNCB-202ENST00000393693 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.46■■□□□ 1.83
SNCB-202ENST00000393693 PROM2Q8N271 834 aa26.46■■□□□ 1.83
SNCB-202ENST00000393693 NFAT5O94916 1531 aa26.45■■□□□ 1.83
SNCB-202ENST00000393693 WNK3Q9BYP7 1800 aa26.45■■□□□ 1.82
SNCB-202ENST00000393693 PPP1R1BQ9UD71 204 aaPredicted RBP26.43■■□□□ 1.82
SNCB-202ENST00000393693 EXOC5O00471 708 aa26.42■■□□□ 1.82
SNCB-202ENST00000393693 PDGFDQ9GZP0 370 aaPredicted RBP26.42■■□□□ 1.82
SNCB-202ENST00000393693 NME9Q86XW9 330 aa26.41■■□□□ 1.82
SNCB-202ENST00000393693 CARD11Q9BXL7 1154 aa26.41■■□□□ 1.82
SNCB-202ENST00000393693 BCL9O00512 1426 aa26.4■■□□□ 1.82
SNCB-202ENST00000393693 RGPD3A6NKT7 1758 aaPredicted RBP26.4■■□□□ 1.82
SNCB-202ENST00000393693 RGPD4Q7Z3J3 1758 aa26.4■■□□□ 1.82
SNCB-202ENST00000393693 CD163L1Q9NR16 1453 aa26.39■■□□□ 1.82
SNCB-202ENST00000393693 CCDC7Q96M83 1385 aa26.39■■□□□ 1.82
SNCB-202ENST00000393693 TMC1Q8TDI8 760 aa26.39■■□□□ 1.82
SNCB-202ENST00000393693 CLSPNQ9HAW4 1339 aa26.39■■□□□ 1.81
SNCB-202ENST00000393693 USP31Q70CQ4 1352 aa26.38■■□□□ 1.81
SNCB-202ENST00000393693 SBNO2Q9Y2G9 1366 aa26.38■■□□□ 1.81
SNCB-202ENST00000393693 MON2Q7Z3U7 1717 aa26.37■■□□□ 1.81
SNCB-202ENST00000393693 SLC12A5Q9H2X9 1139 aa26.37■■□□□ 1.81
SNCB-202ENST00000393693 TXNRD1Q16881 649 aa26.36■■□□□ 1.81
SNCB-202ENST00000393693 NLRP2Q9NX02 1062 aa26.35■■□□□ 1.81
SNCB-202ENST00000393693 ZBTB7AO95365 584 aa26.34■■□□□ 1.81
SNCB-202ENST00000393693 ACSBG1Q96GR2 724 aa26.34■■□□□ 1.81
SNCB-202ENST00000393693 ERBB3P21860 1342 aa26.34■■□□□ 1.81
SNCB-202ENST00000393693 TNS2Q63HR2 1409 aa26.33■■□□□ 1.81
SNCB-202ENST00000393693 HDGFL2Q7Z4V5 671 aaPredicted RBP26.33■■□□□ 1.81
SNCB-202ENST00000393693 ABCC6O95255 1503 aa26.33■■□□□ 1.81
SNCB-202ENST00000393693 YY1P25490 414 aa26.32■■□□□ 1.8
SNCB-202ENST00000393693 CASZ1Q86V15 1759 aa26.32■■□□□ 1.8
SNCB-202ENST00000393693 STK32BQ9NY57 414 aa26.31■■□□□ 1.8
SNCB-202ENST00000393693 NINLQ9Y2I6 1382 aa26.31■■□□□ 1.8
SNCB-202ENST00000393693 ANKRD24Q8TF21 1146 aa26.3■■□□□ 1.8
SNCB-202ENST00000393693 ATF5Q9Y2D1 282 aaPredicted RBP26.3■■□□□ 1.8
SNCB-202ENST00000393693 IL2RBP14784 551 aa26.29■■□□□ 1.8
SNCB-202ENST00000393693 SLC15A2Q16348 729 aa26.29■■□□□ 1.8
SNCB-202ENST00000393693 USP54Q70EL1 1684 aa26.28■■□□□ 1.8
SNCB-202ENST00000393693 A0A1W2PP64 1363 aa26.28■■□□□ 1.8
SNCB-202ENST00000393693 PTGER2P43116 358 aa26.27■■□□□ 1.8
SNCB-202ENST00000393693 EDC4Q6P2E9 1401 aaKnown RBP26.27■■□□□ 1.8
SNCB-202ENST00000393693 LTN1O94822 1766 aa26.25■■□□□ 1.79
SNCB-202ENST00000393693 TONSLQ96HA7 1378 aa26.25■■□□□ 1.79
SNCB-202ENST00000393693 TERF2IPQ9NYB0 399 aa26.25■■□□□ 1.79
SNCB-202ENST00000393693 DCAF8L1A6NGE4 600 aa26.24■■□□□ 1.79
SNCB-202ENST00000393693 NHSQ6T4R5 1651 aa26.23■■□□□ 1.79
SNCB-202ENST00000393693 LTV1Q96GA3 475 aaPredicted RBP26.22■■□□□ 1.79
SNCB-202ENST00000393693 MYOM1P52179 1685 aa26.2■■□□□ 1.78
SNCB-202ENST00000393693 IP6K1Q92551 441 aa26.2■■□□□ 1.78
SNCB-202ENST00000393693 PUS7Q96PZ0 661 aaKnown RBP26.2■■□□□ 1.78
SNCB-202ENST00000393693 FBLN1P23142 703 aa26.19■■□□□ 1.78
SNCB-202ENST00000393693 TESK2Q96S53 571 aa26.19■■□□□ 1.78
SNCB-202ENST00000393693 ST20-MTHFSA0A0A6YYL1 179 aa26.18■■□□□ 1.78
SNCB-202ENST00000393693 DDX54Q8TDD1 881 aaKnown RBP26.17■■□□□ 1.78
SNCB-202ENST00000393693 MTFR1LQ9H019 292 aa26.17■■□□□ 1.78
SNCB-202ENST00000393693 ZNF827Q17R98 1081 aa26.16■■□□□ 1.78
SNCB-202ENST00000393693 SGIP1Q9BQI5 828 aa26.16■■□□□ 1.78
SNCB-202ENST00000393693 FHDC1Q9C0D6 1143 aaPredicted RBP26.16■■□□□ 1.78
SNCB-202ENST00000393693 LRRC4BQ9NT99 713 aa26.16■■□□□ 1.78
SNCB-202ENST00000393693 SYT17Q9BSW7 474 aa26.15■■□□□ 1.78
SNCB-202ENST00000393693 BTAF1O14981 1849 aa26.14■■□□□ 1.77
SNCB-202ENST00000393693 PAPPAQ13219 1627 aa26.14■■□□□ 1.77
SNCB-202ENST00000393693 MAP3K19Q56UN5 1328 aa26.14■■□□□ 1.77
SNCB-202ENST00000393693 COG3Q96JB2 828 aa26.13■■□□□ 1.77
SNCB-202ENST00000393693 HOXC9P31274 260 aa26.11■■□□□ 1.77
SNCB-202ENST00000393693 AMPHP49418 695 aa26.1■■□□□ 1.77
SNCB-202ENST00000393693 KCNQ4P56696 695 aa26.08■■□□□ 1.77
SNCB-202ENST00000393693 ARXQ96QS3 562 aa26.08■■□□□ 1.77
SNCB-202ENST00000393693 KAT6BQ8WYB5 2073 aa26.07■■□□□ 1.76
SNCB-202ENST00000393693 PRIM1P49642 420 aaKnown RBP26.07■■□□□ 1.76
SNCB-202ENST00000393693 AKT1S1Q96B36 256 aa26.07■■□□□ 1.76
SNCB-202ENST00000393693 SYTL4Q96C24 671 aaPredicted RBP26.07■■□□□ 1.76
SNCB-202ENST00000393693 RRS1Q15050 365 aaKnown RBP26.05■■□□□ 1.76
SNCB-202ENST00000393693 FAM208AQ9UK61 1670 aaKnown RBP26.04■■□□□ 1.76
SNCB-202ENST00000393693 ZCRB1Q8TBF4 217 aaKnown RBP26.04■■□□□ 1.76
SNCB-202ENST00000393693 ANKRD36BQ8N2N9 1353 aa26.04■■□□□ 1.76
SNCB-202ENST00000393693 SLC27A3Q5K4L6 730 aa26.03■■□□□ 1.76
SNCB-202ENST00000393693 GGNBP2Q9H3C7 697 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms