RNA–Protein interactions for RNA: ENST00000393561.5

LAMB1-204, Transcript of laminin subunit beta 1, humanhuman

TSL 5 BASIC

Gene LAMB1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-204ENST00000393561 AKNAQ7Z591 1439 aa13.93□□□□□ -0.18
LAMB1-204ENST00000393561 PATL2C9JE40 543 aaKnown RBP13.93□□□□□ -0.18
LAMB1-204ENST00000393561 WDR33Q9C0J8 1336 aaKnown RBP13.93□□□□□ -0.18
LAMB1-204ENST00000393561 KDM4AO75164 1064 aa13.93□□□□□ -0.18
LAMB1-204ENST00000393561 ATP2B1P20020 1258 aa13.93□□□□□ -0.18
LAMB1-204ENST00000393561 RRP12Q5JTH9 1297 aaKnown RBP13.93□□□□□ -0.18
LAMB1-204ENST00000393561 NACAP1Q9BZK3 213 aa13.93□□□□□ -0.18
LAMB1-204ENST00000393561 K7ELQ4 463 aaPredicted RBP13.92□□□□□ -0.18
LAMB1-204ENST00000393561 TIAM1Q13009 1591 aa13.92□□□□□ -0.18
LAMB1-204ENST00000393561 MAP7D2Q96T17 732 aa13.92□□□□□ -0.18
LAMB1-204ENST00000393561 PRXQ9BXM0 1461 aa13.92□□□□□ -0.18
LAMB1-204ENST00000393561 ZSCAN25Q6NSZ9 544 aa13.92□□□□□ -0.18
LAMB1-204ENST00000393561 CHD1LQ86WJ1 897 aa13.92□□□□□ -0.18
LAMB1-204ENST00000393561 BACH2Q9BYV9 841 aa13.92□□□□□ -0.18
LAMB1-204ENST00000393561 MYO6Q9UM54 1294 aa13.92□□□□□ -0.18
LAMB1-204ENST00000393561 TRIM22Q8IYM9 498 aa13.91□□□□□ -0.18
LAMB1-204ENST00000393561 STRN4Q9NRL3 753 aa13.91□□□□□ -0.18
LAMB1-204ENST00000393561 SUPT6HQ7KZ85 1726 aaKnown RBP13.91□□□□□ -0.18
LAMB1-204ENST00000393561 FCHSD2O94868 740 aa13.91□□□□□ -0.18
LAMB1-204ENST00000393561 RDXP35241 583 aaKnown RBP13.9□□□□□ -0.18
LAMB1-204ENST00000393561 HSP90AB2PQ58FF8 381 aa13.9□□□□□ -0.18
LAMB1-204ENST00000393561 CCDC192P0DO97 292 aa13.9□□□□□ -0.18
LAMB1-204ENST00000393561 NOM1Q5C9Z4 860 aaKnown RBP13.9□□□□□ -0.18
LAMB1-204ENST00000393561 CCAR1Q8IX12 1150 aaKnown RBP13.9□□□□□ -0.18
LAMB1-204ENST00000393561 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
LAMB1-204ENST00000393561 DACH1Q9UI36 760 aa13.9□□□□□ -0.18
LAMB1-204ENST00000393561 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.89□□□□□ -0.19
LAMB1-204ENST00000393561 KRT85P78386 507 aa13.89□□□□□ -0.19
LAMB1-204ENST00000393561 FMNL2Q96PY5 1086 aa13.89□□□□□ -0.19
LAMB1-204ENST00000393561 TOP2BQ02880 1626 aa13.89□□□□□ -0.19
LAMB1-204ENST00000393561 KLHL34Q8N239 644 aa13.89□□□□□ -0.19
LAMB1-204ENST00000393561 SIL1Q9H173 461 aa13.89□□□□□ -0.19
LAMB1-204ENST00000393561 HMGN5P82970 282 aaKnown RBP13.89□□□□□ -0.19
LAMB1-204ENST00000393561 ZFYVE27Q5T4F4 411 aa13.89□□□□□ -0.19
LAMB1-204ENST00000393561 TOM1L2Q6ZVM7 507 aa13.88□□□□□ -0.19
LAMB1-204ENST00000393561 RPAP2Q8IXW5 612 aaPredicted RBP13.88□□□□□ -0.19
LAMB1-204ENST00000393561 CCDC57Q2TAC2 916 aa13.88□□□□□ -0.19
LAMB1-204ENST00000393561 ZSCAN31Q96LW9 406 aaPredicted RBP13.88□□□□□ -0.19
LAMB1-204ENST00000393561 CCDC69A6NI79 296 aa13.88□□□□□ -0.19
LAMB1-204ENST00000393561 CEBPZQ03701 1054 aaKnown RBP13.88□□□□□ -0.19
LAMB1-204ENST00000393561 KRT18P05783 430 aaKnown RBP13.88□□□□□ -0.19
LAMB1-204ENST00000393561 TTLL5Q6EMB2 1281 aa13.88□□□□□ -0.19
LAMB1-204ENST00000393561 AACSQ86V21 672 aa13.87□□□□□ -0.19
LAMB1-204ENST00000393561 TNMDQ9H2S6 317 aa13.87□□□□□ -0.19
LAMB1-204ENST00000393561 CIZ1Q9ULV3 898 aaPredicted RBP13.87□□□□□ -0.19
LAMB1-204ENST00000393561 STK3Q13188 491 aa13.87□□□□□ -0.19
LAMB1-204ENST00000393561 NFE2L2Q16236 605 aa13.87□□□□□ -0.19
LAMB1-204ENST00000393561 BLOC1S2Q6QNY1 142 aa13.87□□□□□ -0.19
LAMB1-204ENST00000393561 ZNHIT6Q9NWK9 470 aaKnown RBP13.87□□□□□ -0.19
LAMB1-204ENST00000393561 TOPBP1Q92547 1522 aa13.87□□□□□ -0.19
LAMB1-204ENST00000393561 SRGAP3O43295 1099 aa13.87□□□□□ -0.19
LAMB1-204ENST00000393561 CDKL5O76039 1030 aa13.87□□□□□ -0.19
LAMB1-204ENST00000393561 CTNNA3Q9UI47 895 aa13.87□□□□□ -0.19
LAMB1-204ENST00000393561 PDIA4P13667 645 aaKnown RBP13.86□□□□□ -0.19
LAMB1-204ENST00000393561 ME1P48163 572 aa13.86□□□□□ -0.19
LAMB1-204ENST00000393561 DCTN1Q14203 1278 aa13.86□□□□□ -0.19
LAMB1-204ENST00000393561 KRT32Q14532 448 aa13.86□□□□□ -0.19
LAMB1-204ENST00000393561 LARP1BQ659C4 914 aaKnown RBP13.86□□□□□ -0.19
LAMB1-204ENST00000393561 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.86□□□□□ -0.199e-7■■■■■ 105.8
LAMB1-204ENST00000393561 STIM1Q13586 685 aa13.86□□□□□ -0.19
LAMB1-204ENST00000393561 SERPINC1P01008 464 aa13.86□□□□□ -0.19
LAMB1-204ENST00000393561 MYL6BP14649 208 aa13.86□□□□□ -0.19
LAMB1-204ENST00000393561 MPHOSPH8Q99549 860 aa13.86□□□□□ -0.19
LAMB1-204ENST00000393561 BTBD11A6QL63 1104 aa13.86□□□□□ -0.19
LAMB1-204ENST00000393561 BRPF1P55201 1214 aaPredicted RBP13.86□□□□□ -0.19
LAMB1-204ENST00000393561 PDRG1Q9NUG6 133 aa13.86□□□□□ -0.19
LAMB1-204ENST00000393561 NSD3Q9BZ95 1437 aa13.86□□□□□ -0.19
LAMB1-204ENST00000393561 NOL7Q9UMY1 257 aaKnown RBP13.85□□□□□ -0.19
LAMB1-204ENST00000393561 MAP4K4O95819 1239 aaPredicted RBP13.85□□□□□ -0.19
LAMB1-204ENST00000393561 DDX54Q8TDD1 881 aaKnown RBP13.85□□□□□ -0.19
LAMB1-204ENST00000393561 SNAPC4Q5SXM2 1469 aa13.85□□□□□ -0.19
LAMB1-204ENST00000393561 SLFN5Q08AF3 891 aa13.85□□□□□ -0.19
LAMB1-204ENST00000393561 SYCP1Q15431 976 aa13.85□□□□□ -0.19
LAMB1-204ENST00000393561 ANKLE2Q86XL3 938 aa13.85□□□□□ -0.19
LAMB1-204ENST00000393561 CWC15Q9P013 229 aaKnown RBP13.85□□□□□ -0.19
LAMB1-204ENST00000393561 LUC7LQ9NQ29 371 aaKnown RBP13.84□□□□□ -0.19
LAMB1-204ENST00000393561 RRS1Q15050 365 aaKnown RBP13.84□□□□□ -0.19
LAMB1-204ENST00000393561 PPFIBP1Q86W92 1011 aa13.84□□□□□ -0.19
LAMB1-204ENST00000393561 CEP126Q9P2H0 1117 aa13.84□□□□□ -0.19
LAMB1-204ENST00000393561 TMPOP42166 694 aaKnown RBP13.84□□□□□ -0.19
LAMB1-204ENST00000393561 PPP6R1Q9UPN7 881 aa13.84□□□□□ -0.19
LAMB1-204ENST00000393561 POLA1P09884 1462 aaPredicted RBP13.84□□□□□ -0.19
LAMB1-204ENST00000393561 CBFA2T2O43439 604 aa13.84□□□□□ -0.19
LAMB1-204ENST00000393561 SOGA3Q5TF21 947 aa13.84□□□□□ -0.19
LAMB1-204ENST00000393561 TXLNBQ8N3L3 684 aa13.84□□□□□ -0.19
LAMB1-204ENST00000393561 POGZQ7Z3K3 1410 aa13.84□□□□□ -0.19
LAMB1-204ENST00000393561 CFAP45Q9UL16 551 aa13.83□□□□□ -0.19
LAMB1-204ENST00000393561 CCDC141Q6ZP82 1450 aa13.83□□□□□ -0.2
LAMB1-204ENST00000393561 TMEM132AQ24JP5 1023 aa13.83□□□□□ -0.2
LAMB1-204ENST00000393561 SPC24Q8NBT2 197 aa13.83□□□□□ -0.2
LAMB1-204ENST00000393561 FKBP4Q02790 459 aaKnown RBP eCLIP13.83□□□□□ -0.2
LAMB1-204ENST00000393561 AEBP2Q6ZN18 517 aaPredicted RBP13.83□□□□□ -0.2
LAMB1-204ENST00000393561 JAKMIP1Q96N16 626 aaKnown RBP13.83□□□□□ -0.2
LAMB1-204ENST00000393561 GNAT3A8MTJ3 354 aa13.83□□□□□ -0.2
LAMB1-204ENST00000393561 BCL11BQ9C0K0 894 aaPredicted RBP13.83□□□□□ -0.2
LAMB1-204ENST00000393561 WWC2Q6AWC2 1192 aa13.82□□□□□ -0.2
LAMB1-204ENST00000393561 SPATA32Q96LK8 384 aa13.82□□□□□ -0.2
LAMB1-204ENST00000393561 NUP133Q8WUM0 1156 aa13.82□□□□□ -0.2
LAMB1-204ENST00000393561 NESP48681 1621 aa13.81□□□□□ -0.2
LAMB1-204ENST00000393561 ATP2B2Q01814 1243 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms