RNA–Protein interactions for RNA: ENST00000393438.6

RUFY1-202, Transcript of RUN and FYVE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUFY1, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-202ENST00000393438 FOXD4L6Q3SYB3 417 aaPredicted RBP17.26■□□□□ 0.35
RUFY1-202ENST00000393438 FOXD4L3Q6VB84 417 aaPredicted RBP17.26■□□□□ 0.35
RUFY1-202ENST00000393438 MYOM2P54296 1465 aa17.26■□□□□ 0.35
RUFY1-202ENST00000393438 CAPN2P17655 700 aa17.25■□□□□ 0.35
RUFY1-202ENST00000393438 MTA1Q13330 715 aa17.25■□□□□ 0.35
RUFY1-202ENST00000393438 MRVI1Q9Y6F6 885 aa17.25■□□□□ 0.35
RUFY1-202ENST00000393438 KIAA1210Q9ULL0 1709 aa17.24■□□□□ 0.35
RUFY1-202ENST00000393438 FSD2A1L4K1 749 aa17.24■□□□□ 0.35
RUFY1-202ENST00000393438 CCDC66A2RUB6 948 aa17.24■□□□□ 0.35
RUFY1-202ENST00000393438 TIGD1Q96MW7 591 aa17.24■□□□□ 0.35
RUFY1-202ENST00000393438 RPGRIP1LQ68CZ1 1315 aa17.24■□□□□ 0.35
RUFY1-202ENST00000393438 ZMYM3Q14202 1370 aa17.23■□□□□ 0.35
RUFY1-202ENST00000393438 POGKQ9P215 609 aa17.23■□□□□ 0.35
RUFY1-202ENST00000393438 ANKRD23Q86SG2 305 aa17.22■□□□□ 0.35
RUFY1-202ENST00000393438 TMEM131LA2VDJ0 1609 aa17.22■□□□□ 0.35
RUFY1-202ENST00000393438 CFAP70Q5T0N1 1121 aa17.22■□□□□ 0.35
RUFY1-202ENST00000393438 ZBED9Q6R2W3 1325 aa17.22■□□□□ 0.35
RUFY1-202ENST00000393438 SPATA31D1Q6ZQQ2 1576 aa17.21■□□□□ 0.35
RUFY1-202ENST00000393438 DNAJC14Q6Y2X3 702 aaPredicted RBP17.21■□□□□ 0.35
RUFY1-202ENST00000393438 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.21■□□□□ 0.356e-7■■■■■ 144.4
RUFY1-202ENST00000393438 KIF16BQ96L93 1317 aa17.21■□□□□ 0.35
RUFY1-202ENST00000393438 NRXN1Q9ULB1 1477 aa17.21■□□□□ 0.35
RUFY1-202ENST00000393438 NUTM2DQ5VT03 806 aaPredicted RBP17.21■□□□□ 0.34
RUFY1-202ENST00000393438 KIF3AQ9Y496 699 aa17.2■□□□□ 0.34
RUFY1-202ENST00000393438 IQGAP1P46940 1657 aa17.2■□□□□ 0.34
RUFY1-202ENST00000393438 UQCRHLA0A096LP55 91 aa17.2■□□□□ 0.34
RUFY1-202ENST00000393438 UQCRHP07919 91 aa17.2■□□□□ 0.34
RUFY1-202ENST00000393438 ITFG2Q969R8 447 aa17.2■□□□□ 0.34
RUFY1-202ENST00000393438 CALR3Q96L12 384 aaKnown RBP17.19■□□□□ 0.34
RUFY1-202ENST00000393438 NEXMIFQ5QGS0 1516 aa17.19■□□□□ 0.34
RUFY1-202ENST00000393438 NRDCO43847 1150 aa17.19■□□□□ 0.34
RUFY1-202ENST00000393438 STAG3Q9UJ98 1225 aa17.19■□□□□ 0.34
RUFY1-202ENST00000393438 POLD1P28340 1107 aa17.18■□□□□ 0.34
RUFY1-202ENST00000393438 TSPAN18Q96SJ8 248 aa17.18■□□□□ 0.34
RUFY1-202ENST00000393438 MYH16Q9H6N6 1097 aa17.18■□□□□ 0.34
RUFY1-202ENST00000393438 CBX1P83916 185 aa17.17■□□□□ 0.34
RUFY1-202ENST00000393438 ZNF771Q7L3S4 317 aaPredicted RBP17.17■□□□□ 0.34
RUFY1-202ENST00000393438 PANK2Q9BZ23 570 aa17.17■□□□□ 0.34
RUFY1-202ENST00000393438 DONSONQ9NYP3 566 aa17.16■□□□□ 0.34
RUFY1-202ENST00000393438 PIK3C2GO75747 1445 aa17.16■□□□□ 0.34
RUFY1-202ENST00000393438 SPTY2D1Q68D10 685 aaPredicted RBP17.16■□□□□ 0.34
RUFY1-202ENST00000393438 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.16■□□□□ 0.34
RUFY1-202ENST00000393438 SCAF11Q99590 1463 aaKnown RBP17.16■□□□□ 0.34
RUFY1-202ENST00000393438 FER1L4A9Z1Z3 1794 aa17.16■□□□□ 0.34
RUFY1-202ENST00000393438 ZNF853P0CG23 659 aa17.15■□□□□ 0.34
RUFY1-202ENST00000393438 GTF2A1P52655 376 aaPredicted RBP17.15■□□□□ 0.34
RUFY1-202ENST00000393438 HDAC1Q13547 482 aaPredicted RBP17.15■□□□□ 0.34
RUFY1-202ENST00000393438 KIF1CO43896 1103 aaKnown RBP17.14■□□□□ 0.34
RUFY1-202ENST00000393438 RBM25P49756 843 aaKnown RBP17.14■□□□□ 0.34
RUFY1-202ENST00000393438 MRE11P49959 708 aa17.14■□□□□ 0.34
RUFY1-202ENST00000393438 SETDB1Q15047 1291 aa17.14■□□□□ 0.34
RUFY1-202ENST00000393438 TESK2Q96S53 571 aa17.14■□□□□ 0.34
RUFY1-202ENST00000393438 C14orf93Q9H972 538 aaKnown RBP17.14■□□□□ 0.33
RUFY1-202ENST00000393438 IPO8O15397 1037 aaKnown RBP17.13■□□□□ 0.33
RUFY1-202ENST00000393438 RAD21O60216 631 aa17.13■□□□□ 0.33
RUFY1-202ENST00000393438 MFAP1P55081 439 aaKnown RBP17.13■□□□□ 0.33
RUFY1-202ENST00000393438 CT47B1P0C2W7 299 aaPredicted RBP17.12■□□□□ 0.33
RUFY1-202ENST00000393438 MYBPC2Q14324 1141 aa17.12■□□□□ 0.33
RUFY1-202ENST00000393438 CTR9Q6PD62 1173 aa17.12■□□□□ 0.33
RUFY1-202ENST00000393438 CEBPAP49715 358 aaPredicted RBP17.12■□□□□ 0.33
RUFY1-202ENST00000393438 ARHGEF1Q92888 912 aaKnown RBP17.12■□□□□ 0.33
RUFY1-202ENST00000393438 SENP3Q9H4L4 574 aaPredicted RBP17.12■□□□□ 0.33
RUFY1-202ENST00000393438 SETBP1Q9Y6X0 1596 aa17.11■□□□□ 0.33
RUFY1-202ENST00000393438 MPHOSPH10O00566 681 aaKnown RBP17.11■□□□□ 0.33
RUFY1-202ENST00000393438 PDE4AP27815 886 aa17.11■□□□□ 0.33
RUFY1-202ENST00000393438 R3HCC1Q9Y3T6 440 aaKnown RBP17.11■□□□□ 0.33
RUFY1-202ENST00000393438 C3P01024 1663 aa17.11■□□□□ 0.33
RUFY1-202ENST00000393438 TNRQ92752 1358 aa17.11■□□□□ 0.33
RUFY1-202ENST00000393438 ZFYVE9O95405 1425 aa17.11■□□□□ 0.33
RUFY1-202ENST00000393438 A2ML1A8K2U0 1454 aa17.11■□□□□ 0.33
RUFY1-202ENST00000393438 TNNT3P45378 269 aaPredicted RBP17.11■□□□□ 0.33
RUFY1-202ENST00000393438 TDO2P48775 406 aa17.11■□□□□ 0.33
RUFY1-202ENST00000393438 BACH2Q9BYV9 841 aa17.11■□□□□ 0.33
RUFY1-202ENST00000393438 MKL1Q969V6 931 aa17.1■□□□□ 0.33
RUFY1-202ENST00000393438 TMEM132EQ6IEE7 984 aa17.1■□□□□ 0.33
RUFY1-202ENST00000393438 EIF3AQ14152 1382 aaKnown RBP17.1■□□□□ 0.33
RUFY1-202ENST00000393438 TMF1P82094 1093 aa17.09■□□□□ 0.33
RUFY1-202ENST00000393438 BRMS1Q9HCU9 246 aa17.09■□□□□ 0.33
RUFY1-202ENST00000393438 DISP3Q9P2K9 1392 aa17.09■□□□□ 0.33
RUFY1-202ENST00000393438 FAM210AQ96ND0 272 aa17.09■□□□□ 0.33
RUFY1-202ENST00000393438 ZC3H12AQ5D1E8 599 aaKnown RBP17.08■□□□□ 0.33
RUFY1-202ENST00000393438 CALCOCO1Q9P1Z2 691 aa17.08■□□□□ 0.33
RUFY1-202ENST00000393438 MTMR7Q9Y216 660 aa17.08■□□□□ 0.33
RUFY1-202ENST00000393438 ADGRB1O14514 1584 aa17.07■□□□□ 0.32
RUFY1-202ENST00000393438 CALRP27797 417 aaKnown RBP17.07■□□□□ 0.32
RUFY1-202ENST00000393438 MS4A1P11836 297 aa17.06■□□□□ 0.32
RUFY1-202ENST00000393438 NOP2P46087 812 aaKnown RBP17.06■□□□□ 0.32
RUFY1-202ENST00000393438 MNS1Q8NEH6 495 aa17.06■□□□□ 0.32
RUFY1-202ENST00000393438 PAIP2Q9BPZ3 127 aaKnown RBP17.06■□□□□ 0.32
RUFY1-202ENST00000393438 NBPF3Q9H094 633 aa17.06■□□□□ 0.32
RUFY1-202ENST00000393438 TRAK1Q9UPV9 953 aa17.06■□□□□ 0.32
RUFY1-202ENST00000393438 SMG6Q86US8 1419 aaKnown RBP17.06■□□□□ 0.32
RUFY1-202ENST00000393438 SENP3-EIF4A1A0A087X0R7 540 aa17.06■□□□□ 0.32
RUFY1-202ENST00000393438 SCP2P22307 547 aa17.06■□□□□ 0.32
RUFY1-202ENST00000393438 FOXD4L5Q5VV16 416 aaPredicted RBP17.06■□□□□ 0.32
RUFY1-202ENST00000393438 FOXD4L4Q8WXT5 416 aaPredicted RBP17.06■□□□□ 0.32
RUFY1-202ENST00000393438 ISY1Q9ULR0 285 aaKnown RBP17.06■□□□□ 0.32
RUFY1-202ENST00000393438 RIMS2Q9UQ26 1411 aa17.05■□□□□ 0.32
RUFY1-202ENST00000393438 UBR1Q8IWV7 1749 aa17.05■□□□□ 0.32
RUFY1-202ENST00000393438 ZSCAN30Q86W11 494 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms