RNA–Protein interactions for RNA: ENST00000393410.5

MDM2-208, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-208ENST00000393410 ITPKCQ96DU7 683 aa7.13□□□□□ -1.27
MDM2-208ENST00000393410 KCTD15Q96SI1 283 aaPredicted RBP7.13□□□□□ -1.27
MDM2-208ENST00000393410 INTS6LQ5JSJ4 861 aaKnown RBP7.12□□□□□ -1.27
MDM2-208ENST00000393410 DZIP3Q86Y13 1208 aaKnown RBP7.12□□□□□ -1.27
MDM2-208ENST00000393410 ZFAND3Q9H8U3 227 aa7.12□□□□□ -1.27
MDM2-208ENST00000393410 POM121Q96HA1 1249 aa7.11□□□□□ -1.27
MDM2-208ENST00000393410 ATP13A2Q9NQ11 1180 aa7.11□□□□□ -1.27
MDM2-208ENST00000393410 GMPR2Q9P2T1 348 aaKnown RBP7.11□□□□□ -1.27
MDM2-208ENST00000393410 CDV3Q9UKY7 258 aaKnown RBP7.11□□□□□ -1.27
MDM2-208ENST00000393410 COG6Q9Y2V7 657 aa7.11□□□□□ -1.27
MDM2-208ENST00000393410 PCDHB9Q9Y5E1 797 aa7.11□□□□□ -1.27
MDM2-208ENST00000393410 ESPNB1AK53 854 aa7.1□□□□□ -1.27
MDM2-208ENST00000393410 ZIC2O95409 532 aaPredicted RBP7.1□□□□□ -1.27
MDM2-208ENST00000393410 BMP1P13497 986 aa7.1□□□□□ -1.27
MDM2-208ENST00000393410 ABL2P42684 1182 aa7.1□□□□□ -1.27
MDM2-208ENST00000393410 PPP1R26Q5T8A7 1209 aaPredicted RBP7.1□□□□□ -1.27
MDM2-208ENST00000393410 TRIM46Q7Z4K8 759 aa7.1□□□□□ -1.27
MDM2-208ENST00000393410 CCDC116Q8IYX3 515 aa7.1□□□□□ -1.27
MDM2-208ENST00000393410 GIGYF1O75420 1035 aaPredicted RBP7.09□□□□□ -1.27
MDM2-208ENST00000393410 ZNF787Q6DD87 383 aa7.09□□□□□ -1.27
MDM2-208ENST00000393410 PRM3Q9NNZ6 103 aa7.09□□□□□ -1.27
MDM2-208ENST00000393410 RAB15P59190 212 aa7.08□□□□□ -1.28
MDM2-208ENST00000393410 VAC14Q08AM6 782 aa7.08□□□□□ -1.28
MDM2-208ENST00000393410 FLIIQ13045 1269 aa7.08□□□□□ -1.28
MDM2-208ENST00000393410 NBPF20Q3BBV1 942 aa7.08□□□□□ -1.28
MDM2-208ENST00000393410 TMPRSS4Q9NRS4 437 aa7.08□□□□□ -1.28
MDM2-208ENST00000393410 EMILIN1Q9Y6C2 1016 aa7.08□□□□□ -1.28
MDM2-208ENST00000393410 ERVH48-1M5A8F1 160 aa7.06□□□□□ -1.28
MDM2-208ENST00000393410 CBLBQ13191 982 aa7.06□□□□□ -1.28
MDM2-208ENST00000393410 SNRPBP14678 240 aaKnown RBP7.05□□□□□ -1.28
MDM2-208ENST00000393410 UBTFP17480 764 aaKnown RBP7.05□□□□□ -1.28
MDM2-208ENST00000393410 MRPL14Q6P1L8 145 aaKnown RBP7.05□□□□□ -1.28
MDM2-208ENST00000393410 C11orf95C9JLR9 678 aaPredicted RBP7.04□□□□□ -1.28
MDM2-208ENST00000393410 LILRA1O75019 489 aa7.04□□□□□ -1.28
MDM2-208ENST00000393410 DHX9Q08211 1270 aaKnown RBP7.04□□□□□ -1.28
MDM2-208ENST00000393410 SEPT12Q8IYM1 358 aa7.04□□□□□ -1.28
MDM2-208ENST00000393410 MEIOBQ8N635 442 aa7.04□□□□□ -1.28
MDM2-208ENST00000393410 ZNF784Q8NCA9 323 aaPredicted RBP7.04□□□□□ -1.28
MDM2-208ENST00000393410 ZFP42Q96MM3 310 aa7.04□□□□□ -1.28
MDM2-208ENST00000393410 PGPEP1Q9NXJ5 209 aa7.04□□□□□ -1.28
MDM2-208ENST00000393410 ZNF330Q9Y3S2 320 aaPredicted RBP7.04□□□□□ -1.28
MDM2-208ENST00000393410 ADD1P35611 737 aaKnown RBP7.03□□□□□ -1.28
MDM2-208ENST00000393410 MCCD1P59942 119 aaPredicted RBP7.03□□□□□ -1.28
MDM2-208ENST00000393410 Q6ZVU0 165 aa7.03□□□□□ -1.28
MDM2-208ENST00000393410 CLUAP1Q96AJ1 413 aa7.03□□□□□ -1.28
MDM2-208ENST00000393410 TRIM47Q96LD4 638 aa7.03□□□□□ -1.28
MDM2-208ENST00000393410 PURBQ96QR8 312 aaKnown RBP7.03□□□□□ -1.28
MDM2-208ENST00000393410 CEP126Q9P2H0 1117 aa7.03□□□□□ -1.28
MDM2-208ENST00000393410 EIF4G2P78344 907 aaKnown RBP eCLIP7.02□□□□□ -1.29
MDM2-208ENST00000393410 WASHC4Q2M389 1173 aa7.02□□□□□ -1.29
MDM2-208ENST00000393410 LINC00528Q8N1L1 170 aa7.02□□□□□ -1.29
MDM2-208ENST00000393410 SENP2Q9HC62 589 aa7.02□□□□□ -1.29
MDM2-208ENST00000393410 RAD21O60216 631 aa7.01□□□□□ -1.29
MDM2-208ENST00000393410 TSGA10IPQ3SY00 556 aa7.01□□□□□ -1.29
MDM2-208ENST00000393410 C6orf118Q5T5N4 469 aa7.01□□□□□ -1.29
MDM2-208ENST00000393410 PHTF2Q8N3S3 785 aa7.01□□□□□ -1.29
MDM2-208ENST00000393410 KDF1Q8NAX2 398 aaPredicted RBP7.01□□□□□ -1.29
MDM2-208ENST00000393410 AGBL1Q96MI9 1066 aa7.01□□□□□ -1.29
MDM2-208ENST00000393410 CCDC85AQ96PX6 553 aaPredicted RBP7.01□□□□□ -1.29
MDM2-208ENST00000393410 CYLDQ9NQC7 956 aa7.01□□□□□ -1.29
MDM2-208ENST00000393410 POM121CA8CG34 1229 aa7□□□□□ -1.29
MDM2-208ENST00000393410 BMP2P12643 396 aa6.99□□□□□ -1.29
MDM2-208ENST00000393410 SCTRP47872 440 aa6.99□□□□□ -1.29
MDM2-208ENST00000393410 SCARF1Q14162 830 aa6.99□□□□□ -1.29
MDM2-208ENST00000393410 RNF20Q5VTR2 975 aa6.99□□□□□ -1.29
MDM2-208ENST00000393410 ZNF592Q92610 1267 aa6.99□□□□□ -1.29
MDM2-208ENST00000393410 KIFC2Q96AC6 838 aa6.99□□□□□ -1.29
MDM2-208ENST00000393410 ZNF775Q96BV0 537 aaPredicted RBP6.99□□□□□ -1.29
MDM2-208ENST00000393410 CDCA7Q9BWT1 371 aaPredicted RBP6.99□□□□□ -1.29
MDM2-208ENST00000393410 PCDHB11Q9Y5F2 797 aa6.99□□□□□ -1.29
MDM2-208ENST00000393410 SOBPA7XYQ1 873 aa6.98□□□□□ -1.29
MDM2-208ENST00000393410 ERVK-9P63128 1117 aa6.98□□□□□ -1.29
MDM2-208ENST00000393410 RELBQ01201 579 aa6.98□□□□□ -1.29
MDM2-208ENST00000393410 FNBP4Q8N3X1 1017 aaPredicted RBP6.98□□□□□ -1.29
MDM2-208ENST00000393410 ADAMTS19Q8TE59 1207 aa6.98□□□□□ -1.29
MDM2-208ENST00000393410 TSEN34Q9BSV6 310 aaKnown RBP6.98□□□□□ -1.29
MDM2-208ENST00000393410 ALG2Q9H553 416 aa6.98□□□□□ -1.29
MDM2-208ENST00000393410 ADH1AP07327 375 aa6.97□□□□□ -1.29
MDM2-208ENST00000393410 SEMA3FQ13275 785 aa6.97□□□□□ -1.29
MDM2-208ENST00000393410 ZNF395Q9H8N7 513 aaPredicted RBP6.97□□□□□ -1.29
MDM2-208ENST00000393410 CHIC2Q9UKJ5 165 aa6.97□□□□□ -1.29
MDM2-208ENST00000393410 PIK3CDO00329 1044 aa6.96□□□□□ -1.3
MDM2-208ENST00000393410 SPINT1O43278 529 aa6.96□□□□□ -1.3
MDM2-208ENST00000393410 UPP2O95045 317 aa6.96□□□□□ -1.3
MDM2-208ENST00000393410 SOX11P35716 441 aa6.96□□□□□ -1.3
MDM2-208ENST00000393410 CC2D2BQ6DHV5 1058 aa6.96□□□□□ -1.3
MDM2-208ENST00000393410 CCDC125Q86Z20 511 aa6.96□□□□□ -1.3
MDM2-208ENST00000393410 SOS2Q07890 1332 aaPredicted RBP6.96□□□□□ -1.3
MDM2-208ENST00000393410 PTGIRP43119 386 aa6.95□□□□□ -1.3
MDM2-208ENST00000393410 SLFNL1Q499Z3 407 aa6.95□□□□□ -1.3
MDM2-208ENST00000393410 PROSER2Q86WR7 435 aaPredicted RBP6.95□□□□□ -1.3
MDM2-208ENST00000393410 RNF135Q8IUD6 432 aa6.95□□□□□ -1.3
MDM2-208ENST00000393410 WWC1Q8IX03 1113 aa6.95□□□□□ -1.3
MDM2-208ENST00000393410 INSM2Q96T92 566 aaPredicted RBP6.95□□□□□ -1.3
MDM2-208ENST00000393410 OSBPL3Q9H4L5 887 aa6.95□□□□□ -1.3
MDM2-208ENST00000393410 A6NJR5 290 aa6.94□□□□□ -1.3
MDM2-208ENST00000393410 TRAK2O60296 914 aa6.94□□□□□ -1.3
MDM2-208ENST00000393410 CTSOP43234 321 aaPredicted RBP6.94□□□□□ -1.3
MDM2-208ENST00000393410 DNMT3LQ9UJW3 386 aa6.94□□□□□ -1.3
MDM2-208ENST00000393410 FIGNL2A6NMB9 653 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms