RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.59■□□□□ 0.09
LCA5-202ENST00000392959 EPS15P42566 896 aa15.58■□□□□ 0.09
LCA5-202ENST00000392959 BRPF1P55201 1214 aaPredicted RBP15.58■□□□□ 0.08
LCA5-202ENST00000392959 ATF3P18847 181 aa15.58■□□□□ 0.08
LCA5-202ENST00000392959 PIP4K2AP48426 406 aaPredicted RBP15.58■□□□□ 0.08
LCA5-202ENST00000392959 GPRASP1Q5JY77 1395 aa15.58■□□□□ 0.08
LCA5-202ENST00000392959 TXNDC2Q86VQ3 553 aa15.58■□□□□ 0.08
LCA5-202ENST00000392959 TIAM1Q13009 1591 aa15.58■□□□□ 0.08
LCA5-202ENST00000392959 TROQ12816 1431 aaPredicted RBP15.57■□□□□ 0.08
LCA5-202ENST00000392959 SRGAP3O43295 1099 aa15.57■□□□□ 0.08
LCA5-202ENST00000392959 TXLNAP40222 546 aa15.57■□□□□ 0.08
LCA5-202ENST00000392959 TMPOP42166 694 aaKnown RBP15.57■□□□□ 0.08
LCA5-202ENST00000392959 ZSCAN30Q86W11 494 aa15.57■□□□□ 0.08
LCA5-202ENST00000392959 GRIN2BQ13224 1484 aa15.57■□□□□ 0.08
LCA5-202ENST00000392959 H0YHG0 523 aa15.57■□□□□ 0.08
LCA5-202ENST00000392959 ZSCAN31Q96LW9 406 aaPredicted RBP15.57■□□□□ 0.08
LCA5-202ENST00000392959 MTMR7Q9Y216 660 aa15.57■□□□□ 0.08
LCA5-202ENST00000392959 NAIPQ13075 1403 aa15.57■□□□□ 0.08
LCA5-202ENST00000392959 UQCRHLA0A096LP55 91 aa15.57■□□□□ 0.08
LCA5-202ENST00000392959 UQCRHP07919 91 aa15.57■□□□□ 0.08
LCA5-202ENST00000392959 RRP12Q5JTH9 1297 aaKnown RBP15.57■□□□□ 0.08
LCA5-202ENST00000392959 CCDC158Q5M9N0 1113 aa15.57■□□□□ 0.08
LCA5-202ENST00000392959 MAP4K4O95819 1239 aaPredicted RBP15.56■□□□□ 0.08
LCA5-202ENST00000392959 SIL1Q9H173 461 aa15.56■□□□□ 0.08
LCA5-202ENST00000392959 C20orf194Q5TEA3 1177 aa15.56■□□□□ 0.08
LCA5-202ENST00000392959 PRG4Q92954 1404 aaPredicted RBP15.56■□□□□ 0.08
LCA5-202ENST00000392959 IL1RAPL2Q9NP60 686 aa15.56■□□□□ 0.08
LCA5-202ENST00000392959 SPATA32Q96LK8 384 aa15.56■□□□□ 0.08
LCA5-202ENST00000392959 NUP62CLQ9H1M0 184 aa15.56■□□□□ 0.08
LCA5-202ENST00000392959 C11orf95C9JLR9 678 aaPredicted RBP15.55■□□□□ 0.08
LCA5-202ENST00000392959 JAKMIP1Q96N16 626 aaKnown RBP15.55■□□□□ 0.08
LCA5-202ENST00000392959 PDRG1Q9NUG6 133 aa15.55■□□□□ 0.08
LCA5-202ENST00000392959 SLC52A1Q9NWF4 448 aa15.55■□□□□ 0.08
LCA5-202ENST00000392959 PPP6R1Q9UPN7 881 aa15.55■□□□□ 0.08
LCA5-202ENST00000392959 DAPK1P53355 1430 aa15.55■□□□□ 0.08
LCA5-202ENST00000392959 MAGEC2Q9UBF1 373 aaPredicted RBP15.55■□□□□ 0.08
LCA5-202ENST00000392959 RRP9O43818 475 aaKnown RBP15.54■□□□□ 0.08
LCA5-202ENST00000392959 PDIA4P13667 645 aaKnown RBP15.54■□□□□ 0.08
LCA5-202ENST00000392959 NFE2L2Q16236 605 aa15.54■□□□□ 0.08
LCA5-202ENST00000392959 SKAP1Q86WV1 359 aa15.54■□□□□ 0.08
LCA5-202ENST00000392959 CFAP45Q9UL16 551 aa15.54■□□□□ 0.08
LCA5-202ENST00000392959 ZNF530Q6P9A1 599 aaPredicted RBP15.54■□□□□ 0.08
LCA5-202ENST00000392959 TRIM22Q8IYM9 498 aa15.54■□□□□ 0.08
LCA5-202ENST00000392959 CEP57L1Q8IYX8 460 aa15.54■□□□□ 0.08
LCA5-202ENST00000392959 RARSP54136 660 aaKnown RBP15.54■□□□□ 0.08
LCA5-202ENST00000392959 CWC27Q6UX04 472 aaKnown RBP15.54■□□□□ 0.08
LCA5-202ENST00000392959 DCTN1Q14203 1278 aa15.53■□□□□ 0.08
LCA5-202ENST00000392959 AACSQ86V21 672 aa15.53■□□□□ 0.08
LCA5-202ENST00000392959 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.53■□□□□ 0.08
LCA5-202ENST00000392959 ODF2Q5BJF6 829 aa15.53■□□□□ 0.08
LCA5-202ENST00000392959 FILIP1Q7Z7B0 1213 aa15.53■□□□□ 0.08
LCA5-202ENST00000392959 ATAD2Q6PL18 1390 aa15.53■□□□□ 0.08
LCA5-202ENST00000392959 ANKRD30BQ9BXX2 1392 aa15.53■□□□□ 0.08
LCA5-202ENST00000392959 SYCE3A1L190 88 aa15.53■□□□□ 0.08
LCA5-202ENST00000392959 TTC39AQ5SRH9 613 aa15.53■□□□□ 0.08
LCA5-202ENST00000392959 AXDND1Q5T1B0 1012 aaPredicted RBP15.53■□□□□ 0.08
LCA5-202ENST00000392959 LEKR1Q6ZMV7 388 aa15.53■□□□□ 0.08
LCA5-202ENST00000392959 PPFIBP1Q86W92 1011 aa15.53■□□□□ 0.08
LCA5-202ENST00000392959 ZNHIT6Q9NWK9 470 aaKnown RBP15.53■□□□□ 0.08
LCA5-202ENST00000392959 PLEKHH2Q8IVE3 1493 aa15.53■□□□□ 0.08
LCA5-202ENST00000392959 EXOC6BQ9Y2D4 811 aa15.52■□□□□ 0.08
LCA5-202ENST00000392959 SAMD1Q6SPF0 538 aaPredicted RBP15.52■□□□□ 0.08
LCA5-202ENST00000392959 SSH1Q8WYL5 1049 aa15.52■□□□□ 0.08
LCA5-202ENST00000392959 DACH1Q9UI36 760 aa15.52■□□□□ 0.08
LCA5-202ENST00000392959 FAM177BA6PVY3 158 aa15.52■□□□□ 0.07
LCA5-202ENST00000392959 KRT32Q14532 448 aa15.52■□□□□ 0.07
LCA5-202ENST00000392959 ESCO1Q5FWF5 840 aa15.52■□□□□ 0.07
LCA5-202ENST00000392959 CNNM1Q9NRU3 951 aa15.52■□□□□ 0.07
LCA5-202ENST00000392959 SLC3A2P08195 630 aaKnown RBP15.51■□□□□ 0.07
LCA5-202ENST00000392959 TATP17735 454 aaPredicted RBP15.51■□□□□ 0.07
LCA5-202ENST00000392959 KIF6Q6ZMV9 814 aa15.51■□□□□ 0.07
LCA5-202ENST00000392959 CDK5RAP3Q96JB5 506 aa15.51■□□□□ 0.07
LCA5-202ENST00000392959 NSD3Q9BZ95 1437 aa15.51■□□□□ 0.07
LCA5-202ENST00000392959 RRS1Q15050 365 aaKnown RBP15.51■□□□□ 0.07
LCA5-202ENST00000392959 UPF3BQ9BZI7 483 aaKnown RBP15.51■□□□□ 0.07
LCA5-202ENST00000392959 MYO6Q9UM54 1294 aa15.51■□□□□ 0.07
LCA5-202ENST00000392959 RPGRIP1LQ68CZ1 1315 aa15.5■□□□□ 0.07
LCA5-202ENST00000392959 RTEL1-TNFRSF6BF6WH68 1400 aa15.5■□□□□ 0.07
LCA5-202ENST00000392959 CBFA2T2O43439 604 aa15.5■□□□□ 0.07
LCA5-202ENST00000392959 MAP3K11Q16584 847 aa15.5■□□□□ 0.07
LCA5-202ENST00000392959 ZFYVE27Q5T4F4 411 aa15.5■□□□□ 0.07
LCA5-202ENST00000392959 NACAP1Q9BZK3 213 aa15.5■□□□□ 0.07
LCA5-202ENST00000392959 FAM177A1Q8N128 213 aaPredicted RBP15.5■□□□□ 0.07
LCA5-202ENST00000392959 HSP90AB2PQ58FF8 381 aa15.49■□□□□ 0.07
LCA5-202ENST00000392959 CCAR1Q8IX12 1150 aaKnown RBP15.49■□□□□ 0.07
LCA5-202ENST00000392959 PKNOX2Q96KN3 472 aa15.49■□□□□ 0.07
LCA5-202ENST00000392959 TBC1D2Q9BYX2 928 aa15.49■□□□□ 0.07
LCA5-202ENST00000392959 THUMPD2Q9BTF0 503 aaKnown RBP15.49■□□□□ 0.07
LCA5-202ENST00000392959 TSPYL1Q9H0U9 437 aa15.49■□□□□ 0.07
LCA5-202ENST00000392959 ERLIN1O75477 346 aa15.48■□□□□ 0.07
LCA5-202ENST00000392959 CCDC191Q8NCU4 936 aa15.48■□□□□ 0.07
LCA5-202ENST00000392959 RBM42Q9BTD8 480 aaKnown RBP15.48■□□□□ 0.07
LCA5-202ENST00000392959 CTNNA3Q9UI47 895 aa15.48■□□□□ 0.07
LCA5-202ENST00000392959 FERMT3Q86UX7 667 aa15.48■□□□□ 0.07
LCA5-202ENST00000392959 IKQ13123 557 aaPredicted RBP15.48■□□□□ 0.07
LCA5-202ENST00000392959 STIM1Q13586 685 aa15.48■□□□□ 0.07
LCA5-202ENST00000392959 CASTP20810 708 aaKnown RBP15.48■□□□□ 0.07
LCA5-202ENST00000392959 ALDH1L2Q3SY69 923 aa15.48■□□□□ 0.07
LCA5-202ENST00000392959 MX1P20591 662 aa15.47■□□□□ 0.07
LCA5-202ENST00000392959 CEP126Q9P2H0 1117 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms