RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 CAVIN4Q5BKX8 364 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 KCNH5Q8NCM2 988 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 DDX54Q8TDD1 881 aaKnown RBP4.71□□□□□ -1.66
UBR3-202ENST00000392632 L3MBTL2Q969R5 705 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 SLC52A1Q9NWF4 448 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 TTC21AQ8NDW8 1320 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 CADPSQ9ULU8 1353 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 IFIT1P09914 478 aaKnown RBP4.7□□□□□ -1.66
UBR3-202ENST00000392632 CETN1Q12798 172 aa4.7□□□□□ -1.66
UBR3-202ENST00000392632 VPS36Q86VN1 386 aa4.7□□□□□ -1.66
UBR3-202ENST00000392632 PPM1EQ8WY54 764 aa4.7□□□□□ -1.66
UBR3-202ENST00000392632 FOXD4L1Q9NU39 408 aa4.7□□□□□ -1.66
UBR3-202ENST00000392632 RBM19Q9Y4C8 960 aaKnown RBP4.7□□□□□ -1.66
UBR3-202ENST00000392632 PDILTQ8N807 584 aa4.7□□□□□ -1.66
UBR3-202ENST00000392632 PIBF1Q8WXW3 757 aa4.7□□□□□ -1.66
UBR3-202ENST00000392632 NGLY1Q96IV0 654 aa4.7□□□□□ -1.66
UBR3-202ENST00000392632 TANGO6Q9C0B7 1094 aa4.7□□□□□ -1.66
UBR3-202ENST00000392632 INCENPQ9NQS7 918 aa4.7□□□□□ -1.66
UBR3-202ENST00000392632 COMMD10Q9Y6G5 202 aa4.7□□□□□ -1.66
UBR3-202ENST00000392632 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.7□□□□□ -1.66
UBR3-202ENST00000392632 ZNF530Q6P9A1 599 aaPredicted RBP4.7□□□□□ -1.66
UBR3-202ENST00000392632 STXBP4Q6ZWJ1 553 aa4.7□□□□□ -1.66
UBR3-202ENST00000392632 CWC15Q9P013 229 aaKnown RBP4.7□□□□□ -1.66
UBR3-202ENST00000392632 RAI14Q9P0K7 980 aa4.7□□□□□ -1.66
UBR3-202ENST00000392632 SEC63Q9UGP8 760 aaKnown RBP4.7□□□□□ -1.66
UBR3-202ENST00000392632 ZBTB24O43167 697 aaPredicted RBP4.7□□□□□ -1.66
UBR3-202ENST00000392632 POLD1P28340 1107 aa4.7□□□□□ -1.66
UBR3-202ENST00000392632 PPFIBP1Q86W92 1011 aa4.7□□□□□ -1.66
UBR3-202ENST00000392632 CABP5Q9NP86 173 aa4.7□□□□□ -1.66
UBR3-202ENST00000392632 LRP2BPQ9P2M1 347 aa4.7□□□□□ -1.66
UBR3-202ENST00000392632 CCDC196A0A1B0GTZ2 297 aa4.69□□□□□ -1.66
UBR3-202ENST00000392632 SLU7O95391 586 aaKnown RBP4.69□□□□□ -1.66
UBR3-202ENST00000392632 FGFR1OPO95684 399 aaKnown RBP4.69□□□□□ -1.66
UBR3-202ENST00000392632 MBD3O95983 291 aa4.69□□□□□ -1.66
UBR3-202ENST00000392632 SSBP05455 408 aaKnown RBP eCLIP4.69□□□□□ -1.66
UBR3-202ENST00000392632 TDO2P48775 406 aa4.69□□□□□ -1.66
UBR3-202ENST00000392632 KRT32Q14532 448 aa4.69□□□□□ -1.66
UBR3-202ENST00000392632 CEP131Q9UPN4 1083 aa4.69□□□□□ -1.66
UBR3-202ENST00000392632 VPS8Q8N3P4 1428 aa4.69□□□□□ -1.66
UBR3-202ENST00000392632 CCDC7Q96M83 1385 aa4.69□□□□□ -1.66
UBR3-202ENST00000392632 ST20-MTHFSA0A0A6YYL1 179 aa4.69□□□□□ -1.66
UBR3-202ENST00000392632 TOM1O60784 492 aa4.69□□□□□ -1.66
UBR3-202ENST00000392632 MYCNP04198 464 aaPredicted RBP4.69□□□□□ -1.66
UBR3-202ENST00000392632 IBSPP21815 317 aaPredicted RBP4.69□□□□□ -1.66
UBR3-202ENST00000392632 MTHFSP49914 203 aa4.69□□□□□ -1.66
UBR3-202ENST00000392632 HOOK3Q86VS8 718 aa4.69□□□□□ -1.66
UBR3-202ENST00000392632 CCDC117Q8IWD4 279 aaPredicted RBP4.69□□□□□ -1.66
UBR3-202ENST00000392632 AKAP2Q9Y2D5 859 aa4.69□□□□□ -1.66
UBR3-202ENST00000392632 CDC45O75419 566 aa4.69□□□□□ -1.66
UBR3-202ENST00000392632 ENOX2Q16206 610 aaKnown RBP4.69□□□□□ -1.66
UBR3-202ENST00000392632 HDGFL1Q5TGJ6 251 aa4.69□□□□□ -1.66
UBR3-202ENST00000392632 CCDC82Q8N4S0 544 aa4.69□□□□□ -1.66
UBR3-202ENST00000392632 TAF4BQ92750 862 aa4.69□□□□□ -1.66
UBR3-202ENST00000392632 RPGRQ92834 1020 aaKnown RBP4.69□□□□□ -1.66
UBR3-202ENST00000392632 HDAC9Q9UKV0 1011 aa4.69□□□□□ -1.66
UBR3-202ENST00000392632 ANKRD18BA2A2Z9 1011 aa4.69□□□□□ -1.66
UBR3-202ENST00000392632 POLR3DP05423 398 aaPredicted RBP4.69□□□□□ -1.66
UBR3-202ENST00000392632 CT47B1P0C2W7 299 aaPredicted RBP4.69□□□□□ -1.66
UBR3-202ENST00000392632 CCT4P50991 539 aaKnown RBP4.69□□□□□ -1.66
UBR3-202ENST00000392632 TEX13AQ9BXU3 409 aaPredicted RBP4.69□□□□□ -1.66
UBR3-202ENST00000392632 BCL11BQ9C0K0 894 aaPredicted RBP4.69□□□□□ -1.66
UBR3-202ENST00000392632 A0A087WZG4 1122 aa4.68□□□□□ -1.66
UBR3-202ENST00000392632 CBFA2T2O43439 604 aa4.68□□□□□ -1.66
UBR3-202ENST00000392632 USP37Q86T82 979 aa4.68□□□□□ -1.66
UBR3-202ENST00000392632 SRCIN1Q9C0H9 1055 aa4.68□□□□□ -1.66
UBR3-202ENST00000392632 PHAXQ9H814 394 aaKnown RBP4.68□□□□□ -1.66
UBR3-202ENST00000392632 LRPPRCP42704 1394 aaKnown RBP4.68□□□□□ -1.66
UBR3-202ENST00000392632 APAF1O14727 1248 aa4.68□□□□□ -1.66
UBR3-202ENST00000392632 GNAI2P04899 355 aa4.68□□□□□ -1.66
UBR3-202ENST00000392632 NCBP1Q09161 790 aaKnown RBP4.68□□□□□ -1.66
UBR3-202ENST00000392632 GIGYF2Q6Y7W6 1299 aaKnown RBP4.68□□□□□ -1.66
UBR3-202ENST00000392632 AEBP1Q8IUX7 1158 aa4.68□□□□□ -1.66
UBR3-202ENST00000392632 IFT57Q9NWB7 429 aa4.68□□□□□ -1.66
UBR3-202ENST00000392632 USP5P45974 858 aa4.68□□□□□ -1.66
UBR3-202ENST00000392632 CAVIN1Q6NZI2 390 aaKnown RBP4.68□□□□□ -1.66
UBR3-202ENST00000392632 UTP14AQ9BVJ6 771 aaKnown RBP4.68□□□□□ -1.66
UBR3-202ENST00000392632 TSPYL1Q9H0U9 437 aa4.68□□□□□ -1.66
UBR3-202ENST00000392632 MKNK2Q9HBH9 465 aa4.68□□□□□ -1.66
UBR3-202ENST00000392632 SCAPERQ9BY12 1400 aa4.68□□□□□ -1.66
UBR3-202ENST00000392632 ERLIN1O75477 346 aa4.68□□□□□ -1.66
UBR3-202ENST00000392632 CHMP4BP1P59074 171 aa4.68□□□□□ -1.66
UBR3-202ENST00000392632 TMEM266Q2M3C6 531 aa4.68□□□□□ -1.66
UBR3-202ENST00000392632 FOXD4L6Q3SYB3 417 aaPredicted RBP4.68□□□□□ -1.66
UBR3-202ENST00000392632 FOXD4L3Q6VB84 417 aaPredicted RBP4.68□□□□□ -1.66
UBR3-202ENST00000392632 CCDC12Q8WUD4 166 aaPredicted RBP4.68□□□□□ -1.66
UBR3-202ENST00000392632 WDR70Q9NW82 654 aa4.68□□□□□ -1.66
UBR3-202ENST00000392632 GOLGA6L10A0A0M3HER8 536 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 BAG4O95429 457 aaKnown RBP4.67□□□□□ -1.66
UBR3-202ENST00000392632 HLA-DOAP06340 250 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 SSR1P43307 286 aaKnown RBP4.67□□□□□ -1.66
UBR3-202ENST00000392632 DDX12PQ92771 950 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 VTI1AQ96AJ9 217 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 BCL2L13Q9BXK5 485 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 RTN4Q9NQC3 1192 aaKnown RBP4.67□□□□□ -1.66
UBR3-202ENST00000392632 CLEC11AQ9Y240 323 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 RAPGEF2Q9Y4G8 1499 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 IMMTQ16891 758 aaKnown RBP4.67□□□□□ -1.66
UBR3-202ENST00000392632 NUTM2GQ5VZR2 741 aa4.67□□□□□ -1.66
UBR3-202ENST00000392632 DZIP1Q86YF9 867 aaKnown RBP4.67□□□□□ -1.66
UBR3-202ENST00000392632 ZNF444Q8N0Y2 327 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms