RNA–Protein interactions for RNA: ENST00000392521.6

CIT-203, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CIT, Length 8,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-203ENST00000392521 GPRASP1Q5JY77 1395 aa14.02□□□□□ -0.16
CIT-203ENST00000392521 ANKRD1Q15327 319 aa14.02□□□□□ -0.16
CIT-203ENST00000392521 NUTM2BA6NNL0 878 aaPredicted RBP14.02□□□□□ -0.16
CIT-203ENST00000392521 NUTM2EB1AL46 878 aaPredicted RBP14.02□□□□□ -0.16
CIT-203ENST00000392521 FKBP4Q02790 459 aaKnown RBP eCLIP14.02□□□□□ -0.16
CIT-203ENST00000392521 NUTM2AQ8IVF1 878 aaPredicted RBP14.02□□□□□ -0.16
CIT-203ENST00000392521 PRPF40AO75400 957 aaKnown RBP14.02□□□□□ -0.17
CIT-203ENST00000392521 ZNF397Q8NF99 534 aaPredicted RBP14.02□□□□□ -0.17
CIT-203ENST00000392521 DRC1Q96MC2 740 aa14.02□□□□□ -0.17
CIT-203ENST00000392521 PIBF1Q8WXW3 757 aa14.02□□□□□ -0.17
CIT-203ENST00000392521 SCLT1Q96NL6 688 aa14.02□□□□□ -0.17
CIT-203ENST00000392521 NLRP6P59044 892 aa14.02□□□□□ -0.17
CIT-203ENST00000392521 MBD3O95983 291 aa14.01□□□□□ -0.17
CIT-203ENST00000392521 CCDC57Q2TAC2 916 aa14.01□□□□□ -0.17
CIT-203ENST00000392521 CEP63Q96MT8 703 aa14.01□□□□□ -0.17
CIT-203ENST00000392521 PSMD1Q99460 953 aa14.01□□□□□ -0.17
CIT-203ENST00000392521 SIL1Q9H173 461 aa14.01□□□□□ -0.17
CIT-203ENST00000392521 PANK1Q8TE04 598 aa14.01□□□□□ -0.17
CIT-203ENST00000392521 CCDC192P0DO97 292 aa14.01□□□□□ -0.17
CIT-203ENST00000392521 DHX8Q14562 1220 aaKnown RBP14.01□□□□□ -0.17
CIT-203ENST00000392521 CETN2P41208 172 aa14.01□□□□□ -0.17
CIT-203ENST00000392521 MRE11P49959 708 aa14.01□□□□□ -0.17
CIT-203ENST00000392521 CEP57L1Q8IYX8 460 aa14.01□□□□□ -0.17
CIT-203ENST00000392521 CABP4P57796 275 aa14.01□□□□□ -0.17
CIT-203ENST00000392521 ERLIN1O75477 346 aa14□□□□□ -0.17
CIT-203ENST00000392521 GNAI3P08754 354 aa14□□□□□ -0.17
CIT-203ENST00000392521 MYL6BP14649 208 aa14□□□□□ -0.17
CIT-203ENST00000392521 TDO2P48775 406 aa14□□□□□ -0.17
CIT-203ENST00000392521 ESCO1Q5FWF5 840 aa14□□□□□ -0.17
CIT-203ENST00000392521 DHX57Q6P158 1386 aaKnown RBP14□□□□□ -0.17
CIT-203ENST00000392521 GNAI2P04899 355 aa14□□□□□ -0.17
CIT-203ENST00000392521 TNIP1Q15025 636 aa14□□□□□ -0.17
CIT-203ENST00000392521 CBFA2T2O43439 604 aa14□□□□□ -0.17
CIT-203ENST00000392521 TRAK2O60296 914 aa14□□□□□ -0.17
CIT-203ENST00000392521 PLEKHO1Q53GL0 409 aaPredicted RBP14□□□□□ -0.17
CIT-203ENST00000392521 CCDC113Q9H0I3 377 aa14□□□□□ -0.17
CIT-203ENST00000392521 PPP4R3AQ6IN85 833 aa14□□□□□ -0.17
CIT-203ENST00000392521 PPM1EQ8WY54 764 aa14□□□□□ -0.17
CIT-203ENST00000392521 ZSCAN25Q6NSZ9 544 aa14□□□□□ -0.17
CIT-203ENST00000392521 MAP4K4O95819 1239 aaPredicted RBP13.99□□□□□ -0.17
CIT-203ENST00000392521 PPP1R12BO60237 982 aaPredicted RBP13.99□□□□□ -0.17
CIT-203ENST00000392521 DDX54Q8TDD1 881 aaKnown RBP13.99□□□□□ -0.17
CIT-203ENST00000392521 CYP46A1Q9Y6A2 500 aa13.99□□□□□ -0.17
CIT-203ENST00000392521 TDRD9Q8NDG6 1382 aaKnown RBP13.99□□□□□ -0.17
CIT-203ENST00000392521 WDHD1O75717 1129 aaPredicted RBP13.99□□□□□ -0.17
CIT-203ENST00000392521 COMMD10Q9Y6G5 202 aa13.99□□□□□ -0.17
CIT-203ENST00000392521 CCDC150Q8NCX0 1101 aa13.99□□□□□ -0.17
CIT-203ENST00000392521 CFAP45Q9UL16 551 aa13.98□□□□□ -0.17
CIT-203ENST00000392521 GAS2L2Q8NHY3 880 aa13.98□□□□□ -0.17
CIT-203ENST00000392521 EIF5P55010 431 aaKnown RBP13.98□□□□□ -0.17
CIT-203ENST00000392521 PAXIP1Q6ZW49 1069 aaPredicted RBP13.98□□□□□ -0.17
CIT-203ENST00000392521 TAF4BQ92750 862 aa13.98□□□□□ -0.17
CIT-203ENST00000392521 UBAC1Q9BSL1 405 aa13.98□□□□□ -0.17
CIT-203ENST00000392521 CDKL5O76039 1030 aa13.97□□□□□ -0.17
CIT-203ENST00000392521 AEBP1Q8IUX7 1158 aa13.97□□□□□ -0.17
CIT-203ENST00000392521 GOPCQ9HD26 462 aa13.97□□□□□ -0.17
CIT-203ENST00000392521 EPB41L2O43491 1005 aaKnown RBP13.97□□□□□ -0.17
CIT-203ENST00000392521 RBM10P98175 930 aaKnown RBP13.97□□□□□ -0.17
CIT-203ENST00000392521 SMARCA2P51531 1590 aa13.97□□□□□ -0.17
CIT-203ENST00000392521 TATP17735 454 aaPredicted RBP13.97□□□□□ -0.17
CIT-203ENST00000392521 HOMER2Q9NSB8 354 aa13.97□□□□□ -0.17
CIT-203ENST00000392521 SPINK5Q9NQ38 1064 aaPredicted RBP13.97□□□□□ -0.17
CIT-203ENST00000392521 DDX23Q9BUQ8 820 aaKnown RBP13.96□□□□□ -0.17
CIT-203ENST00000392521 FHOD3Q2V2M9 1422 aa13.96□□□□□ -0.17
CIT-203ENST00000392521 TOM1L2Q6ZVM7 507 aa13.96□□□□□ -0.17
CIT-203ENST00000392521 GIMAP7Q8NHV1 300 aa13.96□□□□□ -0.17
CIT-203ENST00000392521 CCDC102AQ96A19 550 aa13.96□□□□□ -0.17
CIT-203ENST00000392521 SEC63Q9UGP8 760 aaKnown RBP13.96□□□□□ -0.17
CIT-203ENST00000392521 USP8P40818 1118 aa13.96□□□□□ -0.17
CIT-203ENST00000392521 CCDC148Q8NFR7 591 aa13.96□□□□□ -0.17
CIT-203ENST00000392521 CABP2Q9NPB3 220 aa13.96□□□□□ -0.17
CIT-203ENST00000392521 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.96□□□□□ -0.181e-6■□□□□ 8.6
CIT-203ENST00000392521 LRP2BPQ9P2M1 347 aa13.96□□□□□ -0.18
CIT-203ENST00000392521 C1orf115Q9H7X2 142 aa13.95□□□□□ -0.18
CIT-203ENST00000392521 JPH4Q96JJ6 628 aa13.95□□□□□ -0.18
CIT-203ENST00000392521 TTLL12Q14166 644 aaPredicted RBP13.95□□□□□ -0.18
CIT-203ENST00000392521 TMOD2Q9NZR1 351 aa13.95□□□□□ -0.18
CIT-203ENST00000392521 GGNBP2Q9H3C7 697 aa13.95□□□□□ -0.18
CIT-203ENST00000392521 KRT85P78386 507 aa13.94□□□□□ -0.18
CIT-203ENST00000392521 GSTTP1A0A1W2PQM5 241 aa13.94□□□□□ -0.18
CIT-203ENST00000392521 CTNNBL1Q8WYA6 563 aaPredicted RBP13.94□□□□□ -0.18
CIT-203ENST00000392521 LARP1BQ659C4 914 aaKnown RBP13.94□□□□□ -0.18
CIT-203ENST00000392521 BCCIPQ9P287 314 aaKnown RBP eCLIP13.94□□□□□ -0.18
CIT-203ENST00000392521 UBE4AQ14139 1066 aa13.94□□□□□ -0.18
CIT-203ENST00000392521 FEZ1Q99689 392 aa13.94□□□□□ -0.18
CIT-203ENST00000392521 WDR78Q5VTH9 848 aa13.93□□□□□ -0.18
CIT-203ENST00000392521 CEP131Q9UPN4 1083 aa13.93□□□□□ -0.18
CIT-203ENST00000392521 HOOK3Q86VS8 718 aa13.93□□□□□ -0.18
CIT-203ENST00000392521 PIP4K2BP78356 416 aa13.93□□□□□ -0.18
CIT-203ENST00000392521 FERMT2Q96AC1 680 aa13.93□□□□□ -0.18
CIT-203ENST00000392521 PRKRIP1Q9H875 184 aaPredicted RBP13.93□□□□□ -0.18
CIT-203ENST00000392521 PUS7Q96PZ0 661 aaKnown RBP13.93□□□□□ -0.18
CIT-203ENST00000392521 CNTLNQ9NXG0 1405 aa13.93□□□□□ -0.18
CIT-203ENST00000392521 WIZO95785 1651 aa13.93□□□□□ -0.18
CIT-203ENST00000392521 MTHFSP49914 203 aa13.92□□□□□ -0.18
CIT-203ENST00000392521 AAMPQ13685 434 aa13.92□□□□□ -0.18
CIT-203ENST00000392521 RAI14Q9P0K7 980 aa13.92□□□□□ -0.18
CIT-203ENST00000392521 ZNF287Q9HBT7 754 aa13.92□□□□□ -0.18
CIT-203ENST00000392521 CECR2Q9BXF3 1484 aa13.92□□□□□ -0.18
CIT-203ENST00000392521 CCDC178Q5BJE1 867 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms