RNA–Protein interactions for RNA: ENST00000391061.1

SNORA40.5-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.5-201ENST00000391061 VASH1Q7L8A9 365 aaPredicted RBP4.51□□□□□ -1.69
SNORA40.5-201ENST00000391061 BPHLQ86WA6 291 aaPredicted RBP4.51□□□□□ -1.69
SNORA40.5-201ENST00000391061 CCDC116Q8IYX3 515 aa4.51□□□□□ -1.69
SNORA40.5-201ENST00000391061 PRR7Q8TB68 274 aa4.51□□□□□ -1.69
SNORA40.5-201ENST00000391061 MKL2Q9ULH7 1088 aa4.51□□□□□ -1.69
SNORA40.5-201ENST00000391061 CTSOP43234 321 aaPredicted RBP4.5□□□□□ -1.69
SNORA40.5-201ENST00000391061 MDM2Q00987 491 aaPredicted RBP4.5□□□□□ -1.69
SNORA40.5-201ENST00000391061 CBLBQ13191 982 aa4.5□□□□□ -1.69
SNORA40.5-201ENST00000391061 GRIN2CQ14957 1233 aa4.5□□□□□ -1.69
SNORA40.5-201ENST00000391061 P3H3Q8IVL6 736 aa4.5□□□□□ -1.69
SNORA40.5-201ENST00000391061 RRAGCQ9HB90 399 aa4.5□□□□□ -1.69
SNORA40.5-201ENST00000391061 PGPEP1Q9NXJ5 209 aa4.5□□□□□ -1.69
SNORA40.5-201ENST00000391061 GPR25O00155 361 aa4.49□□□□□ -1.69
SNORA40.5-201ENST00000391061 ACDQ96AP0 544 aa4.49□□□□□ -1.69
SNORA40.5-201ENST00000391061 INSM2Q96T92 566 aaPredicted RBP4.49□□□□□ -1.69
SNORA40.5-201ENST00000391061 LRRC4BQ9NT99 713 aa4.49□□□□□ -1.69
SNORA40.5-201ENST00000391061 PCDHGC3Q9UN70 934 aa4.49□□□□□ -1.69
SNORA40.5-201ENST00000391061 NSFL1CQ9UNZ2 370 aaKnown RBP4.49□□□□□ -1.69
SNORA40.5-201ENST00000391061 SENP3-EIF4A1A0A087X0R7 540 aa4.48□□□□□ -1.69
SNORA40.5-201ENST00000391061 SNRPNP63162 240 aaKnown RBP4.48□□□□□ -1.69
SNORA40.5-201ENST00000391061 RELBQ01201 579 aa4.48□□□□□ -1.69
SNORA40.5-201ENST00000391061 KRTAP19-1Q8IUB9 90 aa4.48□□□□□ -1.69
SNORA40.5-201ENST00000391061 ZFP64Q9NPA5 681 aa4.48□□□□□ -1.69
SNORA40.5-201ENST00000391061 MAP4K5Q9Y4K4 846 aa4.48□□□□□ -1.69
SNORA40.5-201ENST00000391061 C1QTNF9BB2RNN3 333 aa4.47□□□□□ -1.69
SNORA40.5-201ENST00000391061 COBLO75128 1261 aa4.47□□□□□ -1.69
SNORA40.5-201ENST00000391061 ITGB7P26010 798 aa4.47□□□□□ -1.69
SNORA40.5-201ENST00000391061 COL8A1P27658 744 aa4.47□□□□□ -1.69
SNORA40.5-201ENST00000391061 DOC2BQ14184 412 aa4.47□□□□□ -1.69
SNORA40.5-201ENST00000391061 C4orf48Q5BLP8 95 aa4.47□□□□□ -1.69
SNORA40.5-201ENST00000391061 Q6ZVU0 165 aa4.47□□□□□ -1.69
SNORA40.5-201ENST00000391061 RNF217Q8TC41 542 aa4.47□□□□□ -1.69
SNORA40.5-201ENST00000391061 CUEDC1Q9NWM3 386 aaPredicted RBP4.47□□□□□ -1.69
SNORA40.5-201ENST00000391061 TESPA1A2RU30 521 aaPredicted RBP4.46□□□□□ -1.7
SNORA40.5-201ENST00000391061 SPDYE5A6NIY4 337 aa4.46□□□□□ -1.7
SNORA40.5-201ENST00000391061 OIP5O43482 229 aa4.46□□□□□ -1.7
SNORA40.5-201ENST00000391061 PPP1R26Q5T8A7 1209 aaPredicted RBP4.46□□□□□ -1.7
SNORA40.5-201ENST00000391061 ZNF837Q96EG3 531 aaPredicted RBP4.46□□□□□ -1.7
SNORA40.5-201ENST00000391061 AGBL1Q96MI9 1066 aa4.46□□□□□ -1.7
SNORA40.5-201ENST00000391061 TRERF1Q96PN7 1200 aa4.46□□□□□ -1.7
SNORA40.5-201ENST00000391061 MAP10Q9P2G4 905 aa4.46□□□□□ -1.7
SNORA40.5-201ENST00000391061 MX2P20592 715 aa4.45□□□□□ -1.7
SNORA40.5-201ENST00000391061 MTMR2Q13614 643 aa4.45□□□□□ -1.7
SNORA40.5-201ENST00000391061 PRPF38BQ5VTL8 546 aaKnown RBP4.45□□□□□ -1.7
SNORA40.5-201ENST00000391061 RIPOR1Q6ZS17 1223 aa4.45□□□□□ -1.7
SNORA40.5-201ENST00000391061 GMCL1Q96IK5 515 aa4.45□□□□□ -1.7
SNORA40.5-201ENST00000391061 C1QTNF2Q9BXJ5 285 aa4.45□□□□□ -1.7
SNORA40.5-201ENST00000391061 MAGEB6P1A0A0J9YX57 407 aa4.44□□□□□ -1.7
SNORA40.5-201ENST00000391061 PIK3R2O00459 728 aa4.44□□□□□ -1.7
SNORA40.5-201ENST00000391061 ARTNQ5T4W7 220 aa4.44□□□□□ -1.7
SNORA40.5-201ENST00000391061 LYPD8Q6UX82 237 aa4.44□□□□□ -1.7
SNORA40.5-201ENST00000391061 CD163Q86VB7 1156 aa4.44□□□□□ -1.7
SNORA40.5-201ENST00000391061 GPIHBP1Q8IV16 184 aa4.44□□□□□ -1.7
SNORA40.5-201ENST00000391061 TRMT44Q8IYL2 757 aaKnown RBP4.44□□□□□ -1.7
SNORA40.5-201ENST00000391061 KRTAP4-7Q9BYR0 210 aa4.44□□□□□ -1.7
SNORA40.5-201ENST00000391061 ZNF395Q9H8N7 513 aaPredicted RBP4.44□□□□□ -1.7
SNORA40.5-201ENST00000391061 MAP2K5Q13163 448 aa4.43□□□□□ -1.7
SNORA40.5-201ENST00000391061 LYSMD3Q7Z3D4 306 aa4.43□□□□□ -1.7
SNORA40.5-201ENST00000391061 TRIM22Q8IYM9 498 aa4.43□□□□□ -1.7
SNORA40.5-201ENST00000391061 KRI1Q8N9T8 703 aaKnown RBP4.43□□□□□ -1.7
SNORA40.5-201ENST00000391061 GTPBP3Q969Y2 492 aaKnown RBP4.43□□□□□ -1.7
SNORA40.5-201ENST00000391061 CARD14Q9BXL6 1004 aa4.43□□□□□ -1.7
SNORA40.5-201ENST00000391061 OXCT2Q9BYC2 517 aaPredicted RBP4.43□□□□□ -1.7
SNORA40.5-201ENST00000391061 F12P00748 615 aaPredicted RBP4.42□□□□□ -1.7
SNORA40.5-201ENST00000391061 NDUFV2P19404 249 aa4.42□□□□□ -1.7
SNORA40.5-201ENST00000391061 AMPD1P23109 780 aa4.42□□□□□ -1.7
SNORA40.5-201ENST00000391061 CHRNA4P43681 627 aa4.42□□□□□ -1.7
SNORA40.5-201ENST00000391061 ARMC2Q8NEN0 867 aa4.42□□□□□ -1.7
SNORA40.5-201ENST00000391061 GPCPD1Q9NPB8 672 aa4.42□□□□□ -1.7
SNORA40.5-201ENST00000391061 FAM217BQ9NTX9 383 aaPredicted RBP4.42□□□□□ -1.7
SNORA40.5-201ENST00000391061 SHISA8B8ZZ34 492 aa4.41□□□□□ -1.7
SNORA40.5-201ENST00000391061 H7C1W4 665 aa4.41□□□□□ -1.7
SNORA40.5-201ENST00000391061 CLCN1P35523 988 aa4.41□□□□□ -1.7
SNORA40.5-201ENST00000391061 DHX9Q08211 1270 aaKnown RBP4.41□□□□□ -1.7
SNORA40.5-201ENST00000391061 NBPF14Q5TI25 921 aa4.41□□□□□ -1.7
SNORA40.5-201ENST00000391061 SUV39H2Q9H5I1 410 aa4.41□□□□□ -1.7
SNORA40.5-201ENST00000391061 RHOQP17081 205 aa4.4□□□□□ -1.71
SNORA40.5-201ENST00000391061 MAP2K3P46734 347 aa4.4□□□□□ -1.71
SNORA40.5-201ENST00000391061 DBN1Q16643 649 aa4.4□□□□□ -1.71
SNORA40.5-201ENST00000391061 FOXD4L6Q3SYB3 417 aaPredicted RBP4.4□□□□□ -1.71
SNORA40.5-201ENST00000391061 FOXD4L5Q5VV16 416 aaPredicted RBP4.4□□□□□ -1.71
SNORA40.5-201ENST00000391061 FOXD4L3Q6VB84 417 aaPredicted RBP4.4□□□□□ -1.71
SNORA40.5-201ENST00000391061 PRICKLE2Q7Z3G6 844 aa4.4□□□□□ -1.71
SNORA40.5-201ENST00000391061 MOXD2PA6NHM9 499 aa4.39□□□□□ -1.71
SNORA40.5-201ENST00000391061 GNB5O14775 395 aa4.39□□□□□ -1.71
SNORA40.5-201ENST00000391061 GATA4P43694 442 aa4.39□□□□□ -1.71
SNORA40.5-201ENST00000391061 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
SNORA40.5-201ENST00000391061 GAS2L1Q99501 681 aaPredicted RBP4.39□□□□□ -1.71
SNORA40.5-201ENST00000391061 NOP53Q9NZM5 478 aaKnown RBP4.39□□□□□ -1.71
SNORA40.5-201ENST00000391061 IRF6O14896 467 aa4.38□□□□□ -1.71
SNORA40.5-201ENST00000391061 YBX3P16989 372 aaKnown RBP eCLIP4.38□□□□□ -1.71
SNORA40.5-201ENST00000391061 SPIRE2Q8WWL2 714 aa4.38□□□□□ -1.71
SNORA40.5-201ENST00000391061 EDARADDQ8WWZ3 215 aa4.38□□□□□ -1.71
SNORA40.5-201ENST00000391061 TSC1Q92574 1164 aa4.37□□□□□ -1.71
SNORA40.5-201ENST00000391061 SLC10A4Q96EP9 437 aa4.37□□□□□ -1.71
SNORA40.5-201ENST00000391061 KCTD15Q96SI1 283 aaPredicted RBP4.37□□□□□ -1.71
SNORA40.5-201ENST00000391061 GDF2Q9UK05 429 aaPredicted RBP4.37□□□□□ -1.71
SNORA40.5-201ENST00000391061 ARID1BQ8NFD5 2236 aaPredicted RBP4.36□□□□□ -1.71
SNORA40.5-201ENST00000391061 CFAP99D6REC4 459 aa4.36□□□□□ -1.71
SNORA40.5-201ENST00000391061 GJA5P36382 358 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms