RNA–Protein interactions for RNA: ENST00000390884.1

RNU6-258P-201, Transcript of RNA, U6 small nuclear 258, pseudogene, humanhuman

BASIC

Gene RNU6-258P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-258P-201ENST00000390884 SLC51AQ86UW1 340 aa0.66□□□□□ -2.3
RNU6-258P-201ENST00000390884 ANKLE2Q86XL3 938 aa0.66□□□□□ -2.3
RNU6-258P-201ENST00000390884 NELL2Q99435 816 aa0.66□□□□□ -2.3
RNU6-258P-201ENST00000390884 KIAA1324LA8MWY0 1029 aaPredicted RBP0.65□□□□□ -2.31
RNU6-258P-201ENST00000390884 SHISA8B8ZZ34 492 aa0.65□□□□□ -2.31
RNU6-258P-201ENST00000390884 GRNP28799 593 aaKnown RBP0.65□□□□□ -2.31
RNU6-258P-201ENST00000390884 BHLHE22Q8NFJ8 381 aaPredicted RBP0.65□□□□□ -2.31
RNU6-258P-201ENST00000390884 EDARADDQ8WWZ3 215 aa0.65□□□□□ -2.31
RNU6-258P-201ENST00000390884 MS4A4AQ96JQ5 239 aa0.65□□□□□ -2.31
RNU6-258P-201ENST00000390884 GPR20Q99678 358 aa0.65□□□□□ -2.31
RNU6-258P-201ENST00000390884 IGSF5Q9NSI5 407 aa0.65□□□□□ -2.31
RNU6-258P-201ENST00000390884 FAM53CQ9NYF3 392 aa0.65□□□□□ -2.31
RNU6-258P-201ENST00000390884 MYRFQ9Y2G1 1151 aa0.65□□□□□ -2.31
RNU6-258P-201ENST00000390884 ATP5J2-PTCD1G3V325 749 aa0.64□□□□□ -2.31
RNU6-258P-201ENST00000390884 PTCD1O75127 700 aaKnown RBP0.64□□□□□ -2.31
RNU6-258P-201ENST00000390884 KRT10P13645 584 aa0.64□□□□□ -2.31
RNU6-258P-201ENST00000390884 MX2P20592 715 aa0.64□□□□□ -2.31
RNU6-258P-201ENST00000390884 MAP2K3P46734 347 aa0.64□□□□□ -2.31
RNU6-258P-201ENST00000390884 WDR4P57081 412 aaKnown RBP0.64□□□□□ -2.31
RNU6-258P-201ENST00000390884 KRTAP10-2P60368 255 aa0.64□□□□□ -2.31
RNU6-258P-201ENST00000390884 ATG9BQ674R7 924 aa0.64□□□□□ -2.31
RNU6-258P-201ENST00000390884 FAM84AQ96KN4 292 aa0.64□□□□□ -2.31
RNU6-258P-201ENST00000390884 C20orf173Q96LM9 149 aa0.64□□□□□ -2.31
RNU6-258P-201ENST00000390884 GDF2Q9UK05 429 aaPredicted RBP0.64□□□□□ -2.31
RNU6-258P-201ENST00000390884 SOS2Q07890 1332 aaPredicted RBP0.64□□□□□ -2.31
RNU6-258P-201ENST00000390884 SLC35F4A4IF30 521 aa0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 FIGNL2A6NMB9 653 aa0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 TTLL8A6PVC2 850 aa0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 ADH1CP00326 375 aa0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 CELA3BP08861 270 aa0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 CHRM1P11229 460 aaPredicted RBP0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 GDF5P43026 501 aa0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 GSE1Q14687 1217 aa0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 NFIXQ14938 502 aa0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 INTS5Q6P9B9 1019 aaKnown RBP0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 ZNF575Q86XF7 245 aa0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 PLPP6Q8IY26 295 aa0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 ABI1Q8IZP0 508 aa0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 UPF1Q92900 1129 aaKnown RBP eCLIP0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 FBXW7Q969H0 707 aa0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 PPP1R16BQ96T49 567 aa0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 SPSB2Q99619 263 aa0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 PLVAPQ9BX97 442 aa0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 PHF8Q9UPP1 1060 aa0.63□□□□□ -2.31
RNU6-258P-201ENST00000390884 CYSRT1A8MQ03 144 aa0.62□□□□□ -2.31
RNU6-258P-201ENST00000390884 SMAPO00193 183 aa0.62□□□□□ -2.31
RNU6-258P-201ENST00000390884 BIN1O00499 593 aa0.62□□□□□ -2.31
RNU6-258P-201ENST00000390884 ITGB5P18084 799 aa0.62□□□□□ -2.31
RNU6-258P-201ENST00000390884 KMT5BQ4FZB7 885 aa0.62□□□□□ -2.31
RNU6-258P-201ENST00000390884 C1QL4Q86Z23 238 aa0.62□□□□□ -2.31
RNU6-258P-201ENST00000390884 EHBP1Q8NDI1 1231 aa0.62□□□□□ -2.31
RNU6-258P-201ENST00000390884 ANGEL1Q9UNK9 670 aaKnown RBP0.62□□□□□ -2.31
RNU6-258P-201ENST00000390884 CNTNAP4Q9C0A0 1308 aa0.62□□□□□ -2.31
RNU6-258P-201ENST00000390884 KRTAP9-6A8MVA2 160 aa0.61□□□□□ -2.31
RNU6-258P-201ENST00000390884 NBPF26B4DH59 902 aa0.61□□□□□ -2.31
RNU6-258P-201ENST00000390884 C9orf172C9J069 976 aa0.61□□□□□ -2.31
RNU6-258P-201ENST00000390884 WNT7BP56706 349 aa0.61□□□□□ -2.31
RNU6-258P-201ENST00000390884 NLRP6P59044 892 aa0.61□□□□□ -2.31
RNU6-258P-201ENST00000390884 NNTQ13423 1086 aa0.61□□□□□ -2.31
RNU6-258P-201ENST00000390884 TMEM132AQ24JP5 1023 aa0.61□□□□□ -2.31
RNU6-258P-201ENST00000390884 SPATS1Q496A3 300 aa0.61□□□□□ -2.31
RNU6-258P-201ENST00000390884 XKR5Q6UX68 686 aa0.61□□□□□ -2.31
RNU6-258P-201ENST00000390884 TXNRD3Q86VQ6 643 aa0.61□□□□□ -2.31
RNU6-258P-201ENST00000390884 LINC00528Q8N1L1 170 aa0.61□□□□□ -2.31
RNU6-258P-201ENST00000390884 GOLGA6L1Q8N7Z2 621 aa0.61□□□□□ -2.31
RNU6-258P-201ENST00000390884 ZCCHC4Q9H5U6 513 aa0.61□□□□□ -2.31
RNU6-258P-201ENST00000390884 UNKLQ9H9P5 680 aaKnown RBP0.61□□□□□ -2.31
RNU6-258P-201ENST00000390884 PLEKHG3A1L390 1219 aa0.6□□□□□ -2.31
RNU6-258P-201ENST00000390884 GPR25O00155 361 aa0.6□□□□□ -2.31
RNU6-258P-201ENST00000390884 MED26O95402 600 aa0.6□□□□□ -2.31
RNU6-258P-201ENST00000390884 SKIP12755 728 aa0.6□□□□□ -2.31
RNU6-258P-201ENST00000390884 TIMP2P16035 220 aa0.6□□□□□ -2.31
RNU6-258P-201ENST00000390884 FSTP19883 344 aa0.6□□□□□ -2.31
RNU6-258P-201ENST00000390884 DGKGP49619 791 aa0.6□□□□□ -2.31
RNU6-258P-201ENST00000390884 SKOR2Q2VWA4 1001 aaPredicted RBP0.6□□□□□ -2.31
RNU6-258P-201ENST00000390884 TYW1BQ6NUM6 668 aa0.6□□□□□ -2.31
RNU6-258P-201ENST00000390884 AMIGO3Q86WK7 504 aa0.6□□□□□ -2.31
RNU6-258P-201ENST00000390884 SPATA3Q8NHX4 192 aa0.6□□□□□ -2.31
RNU6-258P-201ENST00000390884 GMCL1Q96IK5 515 aa0.6□□□□□ -2.31
RNU6-258P-201ENST00000390884 PARD6AQ9NPB6 346 aa0.6□□□□□ -2.31
RNU6-258P-201ENST00000390884 PALD1Q9ULE6 856 aa0.6□□□□□ -2.31
RNU6-258P-201ENST00000390884 ADAMTS4O75173 837 aa0.59□□□□□ -2.31
RNU6-258P-201ENST00000390884 PPFIA2O75334 1257 aa0.59□□□□□ -2.31
RNU6-258P-201ENST00000390884 TSPAN15O95858 294 aa0.59□□□□□ -2.31
RNU6-258P-201ENST00000390884 SPINK2P20155 84 aa0.59□□□□□ -2.31
RNU6-258P-201ENST00000390884 CTGFP29279 349 aa0.59□□□□□ -2.31
RNU6-258P-201ENST00000390884 NRG1Q02297 640 aaPredicted RBP0.59□□□□□ -2.31
RNU6-258P-201ENST00000390884 TRIM28Q13263 835 aaKnown RBP0.59□□□□□ -2.31
RNU6-258P-201ENST00000390884 MPRIPQ6WCQ1 1025 aa0.59□□□□□ -2.31
RNU6-258P-201ENST00000390884 USP51Q70EK9 711 aa0.59□□□□□ -2.31
RNU6-258P-201ENST00000390884 GRASPQ7Z6J2 395 aaPredicted RBP0.59□□□□□ -2.31
RNU6-258P-201ENST00000390884 CXorf38Q8TB03 319 aa0.59□□□□□ -2.31
RNU6-258P-201ENST00000390884 BTBD6Q96KE9 485 aa0.59□□□□□ -2.31
RNU6-258P-201ENST00000390884 ZSCAN10Q96SZ4 725 aaPredicted RBP0.59□□□□□ -2.31
RNU6-258P-201ENST00000390884 C11orf21Q9P2W6 132 aa0.59□□□□□ -2.31
RNU6-258P-201ENST00000390884 PNMA3Q9UL41 463 aa0.59□□□□□ -2.31
RNU6-258P-201ENST00000390884 KDM2AQ9Y2K7 1162 aa0.59□□□□□ -2.31
RNU6-258P-201ENST00000390884 IRS2Q9Y4H2 1338 aa0.59□□□□□ -2.32
RNU6-258P-201ENST00000390884 PROB1E7EW31 1015 aa0.58□□□□□ -2.32
RNU6-258P-201ENST00000390884 FOXK1P85037 733 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms