RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 SKOR2Q2VWA4 1001 aaPredicted RBP4.33□□□□□ -1.72
TRAV39-201ENST00000390466 CDCA8Q53HL2 280 aa4.33□□□□□ -1.72
TRAV39-201ENST00000390466 BMP2KLQ5H9B9 411 aa4.33□□□□□ -1.72
TRAV39-201ENST00000390466 TCP11L2Q8N4U5 519 aa4.33□□□□□ -1.72
TRAV39-201ENST00000390466 SPRYD3Q8NCJ5 442 aa4.33□□□□□ -1.72
TRAV39-201ENST00000390466 RUNDC1Q96C34 613 aa4.33□□□□□ -1.72
TRAV39-201ENST00000390466 JPH4Q96JJ6 628 aa4.33□□□□□ -1.72
TRAV39-201ENST00000390466 ARXQ96QS3 562 aa4.33□□□□□ -1.72
TRAV39-201ENST00000390466 MAP7D2Q96T17 732 aa4.33□□□□□ -1.72
TRAV39-201ENST00000390466 RWDD1Q9H446 243 aaPredicted RBP4.33□□□□□ -1.72
TRAV39-201ENST00000390466 UPF2Q9HAU5 1272 aaKnown RBP4.33□□□□□ -1.72
TRAV39-201ENST00000390466 LMBRD1Q9NUN5 540 aa4.33□□□□□ -1.72
TRAV39-201ENST00000390466 NOL7Q9UMY1 257 aaKnown RBP4.33□□□□□ -1.72
TRAV39-201ENST00000390466 FMN2Q9NZ56 1722 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 RGS12O14924 1447 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 FAM135BQ49AJ0 1406 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 ASXL2Q76L83 1435 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 IL16Q14005 1332 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 KIF16BQ96L93 1317 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 K7ELQ4 463 aaPredicted RBP4.32□□□□□ -1.72
TRAV39-201ENST00000390466 PLEKHG5O94827 1062 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 ZSCAN20P17040 1043 aaPredicted RBP4.32□□□□□ -1.72
TRAV39-201ENST00000390466 PTMSP20962 102 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 NASPP49321 788 aaPredicted RBP4.32□□□□□ -1.72
TRAV39-201ENST00000390466 FAM69CQ0P6D2 419 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 UTP14CQ5TAP6 766 aaKnown RBP4.32□□□□□ -1.72
TRAV39-201ENST00000390466 ZKSCAN2Q63HK3 967 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 HSCBQ8IWL3 235 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 ZNF710Q8N1W2 664 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 SSH1Q8WYL5 1049 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 GBP4Q96PP9 640 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 PLEKHF1Q96S99 279 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 BCL2L13Q9BXK5 485 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 RBSNQ9H1K0 784 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 TRIM35Q9UPQ4 493 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 ZKSCAN5Q9Y2L8 839 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 ZDHHC9Q9Y397 364 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 NALCNQ8IZF0 1738 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 LRRC37A3O60309 1634 aa4.32□□□□□ -1.72
TRAV39-201ENST00000390466 PNPLA6Q8IY17 1366 aa4.31□□□□□ -1.72
TRAV39-201ENST00000390466 ADGRF5Q8IZF2 1346 aa4.31□□□□□ -1.72
TRAV39-201ENST00000390466 DYNC1I1O14576 645 aa4.31□□□□□ -1.72
TRAV39-201ENST00000390466 MYCNP04198 464 aaPredicted RBP4.31□□□□□ -1.72
TRAV39-201ENST00000390466 RBM10P98175 930 aaKnown RBP4.31□□□□□ -1.72
TRAV39-201ENST00000390466 DMTNQ08495 405 aa4.31□□□□□ -1.72
TRAV39-201ENST00000390466 POLA2Q14181 598 aa4.31□□□□□ -1.72
TRAV39-201ENST00000390466 TBC1D9Q6ZT07 1266 aa4.31□□□□□ -1.72
TRAV39-201ENST00000390466 DZIP1LQ8IYY4 767 aaKnown RBP4.31□□□□□ -1.72
TRAV39-201ENST00000390466 TMEM57Q8N5G2 664 aa4.31□□□□□ -1.72
TRAV39-201ENST00000390466 GPT2Q8TD30 523 aa4.31□□□□□ -1.72
TRAV39-201ENST00000390466 RBM42Q9BTD8 480 aaKnown RBP4.31□□□□□ -1.72
TRAV39-201ENST00000390466 ATF5Q9Y2D1 282 aaPredicted RBP4.31□□□□□ -1.72
TRAV39-201ENST00000390466 RRP7AQ9Y3A4 280 aaKnown RBP4.31□□□□□ -1.72
TRAV39-201ENST00000390466 C3P01024 1663 aa4.31□□□□□ -1.72
TRAV39-201ENST00000390466 TMEM131LA2VDJ0 1609 aa4.31□□□□□ -1.72
TRAV39-201ENST00000390466 PTPRMP28827 1452 aa4.3□□□□□ -1.72
TRAV39-201ENST00000390466 CDK12Q9NYV4 1490 aaPredicted RBP4.3□□□□□ -1.72
TRAV39-201ENST00000390466 ANKRD36BQ8N2N9 1353 aa4.3□□□□□ -1.72
TRAV39-201ENST00000390466 ABCC4O15439 1325 aa4.3□□□□□ -1.72
TRAV39-201ENST00000390466 UQCRHLA0A096LP55 91 aa4.3□□□□□ -1.72
TRAV39-201ENST00000390466 NPM1P06748 294 aaKnown RBP eCLIP4.3□□□□□ -1.72
TRAV39-201ENST00000390466 UQCRHP07919 91 aa4.3□□□□□ -1.72
TRAV39-201ENST00000390466 GSPT1P15170 499 aaKnown RBP4.3□□□□□ -1.72
TRAV39-201ENST00000390466 MCM5P33992 734 aa4.3□□□□□ -1.72
TRAV39-201ENST00000390466 GTF2F1P35269 517 aaKnown RBP eCLIP4.3□□□□□ -1.72
TRAV39-201ENST00000390466 ZSCAN23Q3MJ62 389 aa4.3□□□□□ -1.72
TRAV39-201ENST00000390466 ATF7IPQ6VMQ6 1270 aa4.3□□□□□ -1.72
TRAV39-201ENST00000390466 SIRT2Q8IXJ6 389 aa4.3□□□□□ -1.72
TRAV39-201ENST00000390466 IL17RAQ96F46 866 aa4.3□□□□□ -1.72
TRAV39-201ENST00000390466 PODXL2Q9NZ53 605 aa4.3□□□□□ -1.72
TRAV39-201ENST00000390466 TMEM63CQ9P1W3 806 aa4.3□□□□□ -1.72
TRAV39-201ENST00000390466 DDX19BQ9UMR2 479 aa4.3□□□□□ -1.72
TRAV39-201ENST00000390466 NSFL1CQ9UNZ2 370 aaKnown RBP4.3□□□□□ -1.72
TRAV39-201ENST00000390466 ZFYVE9O95405 1425 aa4.29□□□□□ -1.72
TRAV39-201ENST00000390466 PRIM1P49642 420 aaKnown RBP4.29□□□□□ -1.72
TRAV39-201ENST00000390466 XPCQ01831 940 aaPredicted RBP4.29□□□□□ -1.72
TRAV39-201ENST00000390466 EXOSC9Q06265 439 aaKnown RBP4.29□□□□□ -1.72
TRAV39-201ENST00000390466 PKP1Q13835 747 aa4.29□□□□□ -1.72
TRAV39-201ENST00000390466 CFAP70Q5T0N1 1121 aa4.29□□□□□ -1.72
TRAV39-201ENST00000390466 SASS6Q6UVJ0 657 aa4.29□□□□□ -1.72
TRAV39-201ENST00000390466 CHD1LQ86WJ1 897 aa4.29□□□□□ -1.72
TRAV39-201ENST00000390466 MYRIPQ8NFW9 859 aa4.29□□□□□ -1.72
TRAV39-201ENST00000390466 PUS7Q96PZ0 661 aaKnown RBP4.29□□□□□ -1.72
TRAV39-201ENST00000390466 R3HCC1Q9Y3T6 440 aaKnown RBP4.29□□□□□ -1.72
TRAV39-201ENST00000390466 NPATQ14207 1427 aa4.29□□□□□ -1.72
TRAV39-201ENST00000390466 A0A1W2PP64 1363 aa4.28□□□□□ -1.72
TRAV39-201ENST00000390466 KIF24Q5T7B8 1368 aa4.28□□□□□ -1.72
TRAV39-201ENST00000390466 LAMA4Q16363 1823 aa4.28□□□□□ -1.72
TRAV39-201ENST00000390466 CANXP27824 592 aaKnown RBP4.28□□□□□ -1.72
TRAV39-201ENST00000390466 TMPOP42166 694 aaKnown RBP4.28□□□□□ -1.72
TRAV39-201ENST00000390466 MTHFSP49914 203 aa4.28□□□□□ -1.72
TRAV39-201ENST00000390466 ALDH1L2Q3SY69 923 aa4.28□□□□□ -1.72
TRAV39-201ENST00000390466 MTERF4Q7Z6M4 381 aaKnown RBP4.28□□□□□ -1.72
TRAV39-201ENST00000390466 JARID2Q92833 1246 aaPredicted RBP4.28□□□□□ -1.72
TRAV39-201ENST00000390466 TSR2Q969E8 191 aaKnown RBP4.28□□□□□ -1.72
TRAV39-201ENST00000390466 TRIM44Q96DX7 344 aaPredicted RBP4.28□□□□□ -1.72
TRAV39-201ENST00000390466 CHAMP1Q96JM3 812 aa4.28□□□□□ -1.72
TRAV39-201ENST00000390466 CCDC94Q9BW85 323 aaPredicted RBP4.28□□□□□ -1.72
TRAV39-201ENST00000390466 LNPKQ9C0E8 428 aa4.28□□□□□ -1.72
TRAV39-201ENST00000390466 SPTLC3Q9NUV7 552 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms