RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 COL18A1P39060 1754 aa15.16■□□□□ 0.02
TRAV4-201ENST00000390426 NME9Q86XW9 330 aa15.16■□□□□ 0.02
TRAV4-201ENST00000390426 HDGFL2Q7Z4V5 671 aaPredicted RBP15.15■□□□□ 0.02
TRAV4-201ENST00000390426 PARP4Q9UKK3 1724 aaKnown RBP15.14■□□□□ 0.01
TRAV4-201ENST00000390426 CD163L1Q9NR16 1453 aa15.14■□□□□ 0.01
TRAV4-201ENST00000390426 PARD3Q8TEW0 1356 aa15.14■□□□□ 0.01
TRAV4-201ENST00000390426 TRIM26Q12899 539 aaPredicted RBP15.14■□□□□ 0.01
TRAV4-201ENST00000390426 CARD10Q9BWT7 1032 aa15.14■□□□□ 0.01
TRAV4-201ENST00000390426 SRCAPQ6ZRS2 3230 aa15.14■□□□□ 0.01
TRAV4-201ENST00000390426 USP31Q70CQ4 1352 aa15.13■□□□□ 0.01
TRAV4-201ENST00000390426 NFAT5O94916 1531 aa15.13■□□□□ 0.01
TRAV4-201ENST00000390426 OVOS2A0A0G2JMS6 1433 aa15.13■□□□□ 0.01
TRAV4-201ENST00000390426 OVOS2A0A0J9YW53 1432 aa15.13■□□□□ 0.01
TRAV4-201ENST00000390426 C11orf95C9JLR9 678 aaPredicted RBP15.13■□□□□ 0.01
TRAV4-201ENST00000390426 OVOS2Q6IE36 1432 aa15.13■□□□□ 0.01
TRAV4-201ENST00000390426 MARCH10Q8NA82 808 aaPredicted RBP15.13■□□□□ 0.01
TRAV4-201ENST00000390426 LRP5O75197 1615 aa15.13■□□□□ 0.01
TRAV4-201ENST00000390426 ST20-MTHFSA0A0A6YYL1 179 aa15.12■□□□□ 0.01
TRAV4-201ENST00000390426 NBPF14Q5TI25 921 aa15.12■□□□□ 0.01
TRAV4-201ENST00000390426 PTF1AQ7RTS3 328 aa15.12■□□□□ 0.01
TRAV4-201ENST00000390426 CDCA7Q9BWT1 371 aaPredicted RBP15.12■□□□□ 0.01
TRAV4-201ENST00000390426 MON2Q7Z3U7 1717 aa15.12■□□□□ 0.01
TRAV4-201ENST00000390426 TERF2IPQ9NYB0 399 aa15.11■□□□□ 0.01
TRAV4-201ENST00000390426 RGPD5Q99666 1765 aa15.11■□□□□ 0.01
TRAV4-201ENST00000390426 LRRC37A3O60309 1634 aa15.1■□□□□ 0.01
TRAV4-201ENST00000390426 EXOC5O00471 708 aa15.1■□□□□ 0.01
TRAV4-201ENST00000390426 PUS7Q96PZ0 661 aaKnown RBP15.1■□□□□ 0.01
TRAV4-201ENST00000390426 TESK2Q96S53 571 aa15.1■□□□□ 0.01
TRAV4-201ENST00000390426 A0A1W2PP64 1363 aa15.1■□□□□ 0.01
TRAV4-201ENST00000390426 EDC4Q6P2E9 1401 aaKnown RBP15.09■□□□□ 0.01
TRAV4-201ENST00000390426 BCL11BQ9C0K0 894 aaPredicted RBP15.09■□□□□ 0.01
TRAV4-201ENST00000390426 NLRP2Q9NX02 1062 aa15.09■□□□□ 0.01
TRAV4-201ENST00000390426 CCDC7Q96M83 1385 aa15.09■□□□□ 0.01
TRAV4-201ENST00000390426 PEAK1Q9H792 1746 aa15.09■□□□□ 0.01
TRAV4-201ENST00000390426 RREB1Q92766 1687 aa15.07■□□□□ 0
TRAV4-201ENST00000390426 PLSCR1O15162 318 aa15.07■□□□□ 0
TRAV4-201ENST00000390426 ANKRD24Q8TF21 1146 aa15.07■□□□□ 0
TRAV4-201ENST00000390426 ERBB3P21860 1342 aa15.07■□□□□ 0
TRAV4-201ENST00000390426 NUP188Q5SRE5 1749 aa15.06■□□□□ 0
TRAV4-201ENST00000390426 ABCC6O95255 1503 aa15.05■□□□□ -0
TRAV4-201ENST00000390426 WNK3Q9BYP7 1800 aa15.05■□□□□ -0
TRAV4-201ENST00000390426 USP54Q70EL1 1684 aa15.04■□□□□ -0
TRAV4-201ENST00000390426 KCNQ2O43526 872 aa15.04■□□□□ -0
TRAV4-201ENST00000390426 PROM2Q8N271 834 aa15.04■□□□□ -0
TRAV4-201ENST00000390426 LTV1Q96GA3 475 aaPredicted RBP15.04■□□□□ -0
TRAV4-201ENST00000390426 SBF2Q86WG5 1849 aa15.03■□□□□ -0
TRAV4-201ENST00000390426 BCL9O00512 1426 aa15.03■□□□□ -0
TRAV4-201ENST00000390426 SLC24A1O60721 1099 aa15.03■□□□□ -0
TRAV4-201ENST00000390426 IL2RBP14784 551 aa15.03■□□□□ -0
TRAV4-201ENST00000390426 FBLN1P23142 703 aa15.03■□□□□ -0
TRAV4-201ENST00000390426 IP6K1Q92551 441 aa15.03■□□□□ -0
TRAV4-201ENST00000390426 ACSBG1Q96GR2 724 aa15.03■□□□□ -0
TRAV4-201ENST00000390426 COG3Q96JB2 828 aa15.03■□□□□ -0
TRAV4-201ENST00000390426 ANO8Q9HCE9 1232 aaPredicted RBP15.03■□□□□ -0
TRAV4-201ENST00000390426 TNS2Q63HR2 1409 aa15.02■□□□□ -0
TRAV4-201ENST00000390426 NINLQ9Y2I6 1382 aa15.02■□□□□ -0
TRAV4-201ENST00000390426 TMF1P82094 1093 aa15.02■□□□□ -0
TRAV4-201ENST00000390426 TXNRD1Q16881 649 aa15.01□□□□□ -0.01
TRAV4-201ENST00000390426 SPON1Q9HCB6 807 aa15.01□□□□□ -0.01
TRAV4-201ENST00000390426 LTN1O94822 1766 aa15.01□□□□□ -0.01
TRAV4-201ENST00000390426 USP47Q96K76 1375 aa15□□□□□ -0.01
TRAV4-201ENST00000390426 MAP3K19Q56UN5 1328 aa15□□□□□ -0.01
TRAV4-201ENST00000390426 AMPHP49418 695 aa15□□□□□ -0.01
TRAV4-201ENST00000390426 ANKRD36BQ8N2N9 1353 aa14.99□□□□□ -0.01
TRAV4-201ENST00000390426 PPP1R1BQ9UD71 204 aaPredicted RBP14.99□□□□□ -0.01
TRAV4-201ENST00000390426 HOXC9P31274 260 aa14.98□□□□□ -0.01
TRAV4-201ENST00000390426 PDGFDQ9GZP0 370 aaPredicted RBP14.98□□□□□ -0.01
TRAV4-201ENST00000390426 FYB1O15117 783 aa14.97□□□□□ -0.01
TRAV4-201ENST00000390426 DDX54Q8TDD1 881 aaKnown RBP14.97□□□□□ -0.01
TRAV4-201ENST00000390426 GGNBP2Q9H3C7 697 aa14.97□□□□□ -0.01
TRAV4-201ENST00000390426 STK32BQ9NY57 414 aa14.97□□□□□ -0.01
TRAV4-201ENST00000390426 RGPD3A6NKT7 1758 aaPredicted RBP14.97□□□□□ -0.01
TRAV4-201ENST00000390426 RGPD4Q7Z3J3 1758 aa14.97□□□□□ -0.01
TRAV4-201ENST00000390426 RRS1Q15050 365 aaKnown RBP14.96□□□□□ -0.01
TRAV4-201ENST00000390426 PCGF6Q9BYE7 350 aa14.96□□□□□ -0.01
TRAV4-201ENST00000390426 ZBTB7AO95365 584 aa14.95□□□□□ -0.02
TRAV4-201ENST00000390426 SLC15A2Q16348 729 aa14.95□□□□□ -0.02
TRAV4-201ENST00000390426 CDCA8Q53HL2 280 aa14.94□□□□□ -0.02
TRAV4-201ENST00000390426 ATF5Q9Y2D1 282 aaPredicted RBP14.93□□□□□ -0.02
TRAV4-201ENST00000390426 NHSQ6T4R5 1651 aa14.93□□□□□ -0.02
TRAV4-201ENST00000390426 NBPF6Q5VWK0 638 aa14.91□□□□□ -0.02
TRAV4-201ENST00000390426 USHBP1Q8N6Y0 703 aa14.91□□□□□ -0.02
TRAV4-201ENST00000390426 ZCRB1Q8TBF4 217 aaKnown RBP14.91□□□□□ -0.02
TRAV4-201ENST00000390426 NBPF4Q96M43 638 aa14.91□□□□□ -0.02
TRAV4-201ENST00000390426 CARD14Q9BXL6 1004 aa14.91□□□□□ -0.02
TRAV4-201ENST00000390426 TIMELESSQ9UNS1 1208 aa14.91□□□□□ -0.02
TRAV4-201ENST00000390426 RTL1A6NKG5 1358 aa14.9□□□□□ -0.02
TRAV4-201ENST00000390426 KAT6BQ8WYB5 2073 aa14.9□□□□□ -0.02
TRAV4-201ENST00000390426 PRIM1P49642 420 aaKnown RBP14.9□□□□□ -0.02
TRAV4-201ENST00000390426 SYTL4Q96C24 671 aaPredicted RBP14.9□□□□□ -0.02
TRAV4-201ENST00000390426 LRRC4BQ9NT99 713 aa14.9□□□□□ -0.02
TRAV4-201ENST00000390426 CASZ1Q86V15 1759 aa14.9□□□□□ -0.02
TRAV4-201ENST00000390426 HSP90AB2PQ58FF8 381 aa14.89□□□□□ -0.03
TRAV4-201ENST00000390426 MEGF6O75095 1541 aa14.88□□□□□ -0.03
TRAV4-201ENST00000390426 FAM208AQ9UK61 1670 aaKnown RBP14.88□□□□□ -0.03
TRAV4-201ENST00000390426 PTGER2P43116 358 aa14.88□□□□□ -0.03
TRAV4-201ENST00000390426 ZNF827Q17R98 1081 aa14.88□□□□□ -0.03
TRAV4-201ENST00000390426 BTAF1O14981 1849 aa14.87□□□□□ -0.03
TRAV4-201ENST00000390426 NSD3Q9BZ95 1437 aa14.87□□□□□ -0.03
TRAV4-201ENST00000390426 RAPGEF4Q8WZA2 1011 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms