RNA–Protein interactions for RNA: ENST00000390387.3

TRBV3-1-201, Transcript of T cell receptor beta variable 3-1, humanhuman

APPRIS P1 BASIC

Gene TRBV3-1, Length 391 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV3-1-201ENST00000390387 TOM1L2Q6ZVM7 507 aa13.46□□□□□ -0.25
TRBV3-1-201ENST00000390387 AXIN2Q9Y2T1 843 aa13.46□□□□□ -0.25
TRBV3-1-201ENST00000390387 CPSF1Q10570 1443 aaKnown RBP13.46□□□□□ -0.26
TRBV3-1-201ENST00000390387 EVC2Q86UK5 1308 aa13.45□□□□□ -0.26
TRBV3-1-201ENST00000390387 WDR17Q8IZU2 1322 aa13.45□□□□□ -0.26
TRBV3-1-201ENST00000390387 PTF1AQ7RTS3 328 aa13.45□□□□□ -0.26
TRBV3-1-201ENST00000390387 SBF2Q86WG5 1849 aa13.45□□□□□ -0.26
TRBV3-1-201ENST00000390387 WNK3Q9BYP7 1800 aa13.45□□□□□ -0.26
TRBV3-1-201ENST00000390387 TRPM1Q7Z4N2 1603 aa13.45□□□□□ -0.26
TRBV3-1-201ENST00000390387 TTC21BQ7Z4L5 1316 aa13.44□□□□□ -0.26
TRBV3-1-201ENST00000390387 PLSCR1O15162 318 aa13.44□□□□□ -0.26
TRBV3-1-201ENST00000390387 ARHGEF25Q86VW2 580 aa13.44□□□□□ -0.26
TRBV3-1-201ENST00000390387 UTRNP46939 3433 aa13.44□□□□□ -0.26
TRBV3-1-201ENST00000390387 BCL9O00512 1426 aa13.43□□□□□ -0.26
TRBV3-1-201ENST00000390387 KCNQ2O43526 872 aa13.43□□□□□ -0.26
TRBV3-1-201ENST00000390387 HOXD11P31277 338 aaPredicted RBP13.43□□□□□ -0.26
TRBV3-1-201ENST00000390387 MARCH10Q8NA82 808 aaPredicted RBP13.43□□□□□ -0.26
TRBV3-1-201ENST00000390387 BCL11BQ9C0K0 894 aaPredicted RBP13.43□□□□□ -0.26
TRBV3-1-201ENST00000390387 SPON1Q9HCB6 807 aa13.43□□□□□ -0.26
TRBV3-1-201ENST00000390387 ANO8Q9HCE9 1232 aaPredicted RBP13.43□□□□□ -0.26
TRBV3-1-201ENST00000390387 AKAP12Q02952 1782 aa13.43□□□□□ -0.26
TRBV3-1-201ENST00000390387 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
TRBV3-1-201ENST00000390387 NFAT5O94916 1531 aa13.42□□□□□ -0.26
TRBV3-1-201ENST00000390387 CASZ1Q86V15 1759 aa13.41□□□□□ -0.26
TRBV3-1-201ENST00000390387 PROM2Q8N271 834 aa13.41□□□□□ -0.26
TRBV3-1-201ENST00000390387 KCNH5Q8NCM2 988 aa13.41□□□□□ -0.26
TRBV3-1-201ENST00000390387 SIN3AQ96ST3 1273 aa13.41□□□□□ -0.26
TRBV3-1-201ENST00000390387 CDCA7Q9BWT1 371 aaPredicted RBP13.41□□□□□ -0.26
TRBV3-1-201ENST00000390387 PPP1R1BQ9UD71 204 aaPredicted RBP13.41□□□□□ -0.26
TRBV3-1-201ENST00000390387 NINLQ9Y2I6 1382 aa13.41□□□□□ -0.26
TRBV3-1-201ENST00000390387 TTC21AQ8NDW8 1320 aa13.4□□□□□ -0.26
TRBV3-1-201ENST00000390387 SOX12O15370 315 aa13.4□□□□□ -0.26
TRBV3-1-201ENST00000390387 CARD10Q9BWT7 1032 aa13.4□□□□□ -0.26
TRBV3-1-201ENST00000390387 ROCK2O75116 1388 aaKnown RBP13.4□□□□□ -0.26
TRBV3-1-201ENST00000390387 RGPD5Q99666 1765 aa13.4□□□□□ -0.26
TRBV3-1-201ENST00000390387 YY1P25490 414 aa13.39□□□□□ -0.27
TRBV3-1-201ENST00000390387 PDGFDQ9GZP0 370 aaPredicted RBP13.39□□□□□ -0.27
TRBV3-1-201ENST00000390387 ABCC6O95255 1503 aa13.39□□□□□ -0.27
TRBV3-1-201ENST00000390387 KTN1Q86UP2 1357 aaKnown RBP13.38□□□□□ -0.27
TRBV3-1-201ENST00000390387 CSB-PGBD3P0DP91 1061 aa13.38□□□□□ -0.27
TRBV3-1-201ENST00000390387 CCDC7Q96M83 1385 aa13.37□□□□□ -0.27
TRBV3-1-201ENST00000390387 MON2Q7Z3U7 1717 aa13.37□□□□□ -0.27
TRBV3-1-201ENST00000390387 TNS2Q63HR2 1409 aa13.37□□□□□ -0.27
TRBV3-1-201ENST00000390387 USP31Q70CQ4 1352 aa13.36□□□□□ -0.27
TRBV3-1-201ENST00000390387 EXOC5O00471 708 aa13.36□□□□□ -0.27
TRBV3-1-201ENST00000390387 TXNRD1Q16881 649 aa13.36□□□□□ -0.27
TRBV3-1-201ENST00000390387 PPP4R3CPQ6ZMV5 832 aa13.36□□□□□ -0.27
TRBV3-1-201ENST00000390387 USP54Q70EL1 1684 aa13.36□□□□□ -0.27
TRBV3-1-201ENST00000390387 CD163L1Q9NR16 1453 aa13.36□□□□□ -0.27
TRBV3-1-201ENST00000390387 SBNO2Q9Y2G9 1366 aa13.35□□□□□ -0.27
TRBV3-1-201ENST00000390387 ZBTB7AO95365 584 aa13.35□□□□□ -0.27
TRBV3-1-201ENST00000390387 NEUROD1Q13562 356 aa13.35□□□□□ -0.27
TRBV3-1-201ENST00000390387 MYOM1P52179 1685 aa13.34□□□□□ -0.27
TRBV3-1-201ENST00000390387 PTGER2P43116 358 aa13.34□□□□□ -0.27
TRBV3-1-201ENST00000390387 ERBB3P21860 1342 aa13.34□□□□□ -0.27
TRBV3-1-201ENST00000390387 NHSQ6T4R5 1651 aa13.34□□□□□ -0.27
TRBV3-1-201ENST00000390387 SLC15A2Q16348 729 aa13.33□□□□□ -0.28
TRBV3-1-201ENST00000390387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRBV3-1-201ENST00000390387 STK32BQ9NY57 414 aa13.33□□□□□ -0.28
TRBV3-1-201ENST00000390387 NME9Q86XW9 330 aa13.32□□□□□ -0.28
TRBV3-1-201ENST00000390387 ACSBG1Q96GR2 724 aa13.31□□□□□ -0.28
TRBV3-1-201ENST00000390387 ATF5Q9Y2D1 282 aaPredicted RBP13.31□□□□□ -0.28
TRBV3-1-201ENST00000390387 PAPPAQ13219 1627 aa13.31□□□□□ -0.28
TRBV3-1-201ENST00000390387 LTN1O94822 1766 aa13.3□□□□□ -0.28
TRBV3-1-201ENST00000390387 NLRP2Q9NX02 1062 aa13.3□□□□□ -0.28
TRBV3-1-201ENST00000390387 IL2RBP14784 551 aa13.29□□□□□ -0.28
TRBV3-1-201ENST00000390387 TMC1Q8TDI8 760 aa13.29□□□□□ -0.28
TRBV3-1-201ENST00000390387 ANKRD24Q8TF21 1146 aa13.29□□□□□ -0.28
TRBV3-1-201ENST00000390387 SGIP1Q9BQI5 828 aa13.29□□□□□ -0.28
TRBV3-1-201ENST00000390387 CARD11Q9BXL7 1154 aa13.29□□□□□ -0.28
TRBV3-1-201ENST00000390387 MTFR1LQ9H019 292 aa13.29□□□□□ -0.28
TRBV3-1-201ENST00000390387 SLC12A5Q9H2X9 1139 aa13.29□□□□□ -0.28
TRBV3-1-201ENST00000390387 EDC4Q6P2E9 1401 aaKnown RBP13.29□□□□□ -0.28
TRBV3-1-201ENST00000390387 FHDC1Q9C0D6 1143 aaPredicted RBP13.28□□□□□ -0.28
TRBV3-1-201ENST00000390387 A0A1W2PP64 1363 aa13.28□□□□□ -0.28
TRBV3-1-201ENST00000390387 HDGFL2Q7Z4V5 671 aaPredicted RBP13.27□□□□□ -0.29
TRBV3-1-201ENST00000390387 SYT17Q9BSW7 474 aa13.27□□□□□ -0.29
TRBV3-1-201ENST00000390387 GOLGB1Q14789 3259 aaKnown RBP13.27□□□□□ -0.29
TRBV3-1-201ENST00000390387 BTAF1O14981 1849 aa13.27□□□□□ -0.29
TRBV3-1-201ENST00000390387 ZNF827Q17R98 1081 aa13.26□□□□□ -0.29
TRBV3-1-201ENST00000390387 LRRC4BQ9NT99 713 aa13.25□□□□□ -0.29
TRBV3-1-201ENST00000390387 TERF2IPQ9NYB0 399 aa13.25□□□□□ -0.29
TRBV3-1-201ENST00000390387 IP6K1Q92551 441 aa13.24□□□□□ -0.29
TRBV3-1-201ENST00000390387 PUS7Q96PZ0 661 aaKnown RBP13.24□□□□□ -0.29
TRBV3-1-201ENST00000390387 ARXQ96QS3 562 aa13.23□□□□□ -0.29
TRBV3-1-201ENST00000390387 FAM208AQ9UK61 1670 aaKnown RBP13.23□□□□□ -0.29
TRBV3-1-201ENST00000390387 MAP3K5Q99683 1374 aa13.22□□□□□ -0.29
TRBV3-1-201ENST00000390387 ZNF784Q8NCA9 323 aaPredicted RBP13.22□□□□□ -0.29
TRBV3-1-201ENST00000390387 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
TRBV3-1-201ENST00000390387 DDX54Q8TDD1 881 aaKnown RBP13.21□□□□□ -0.29
TRBV3-1-201ENST00000390387 LTV1Q96GA3 475 aaPredicted RBP13.21□□□□□ -0.29
TRBV3-1-201ENST00000390387 TESK2Q96S53 571 aa13.21□□□□□ -0.29
TRBV3-1-201ENST00000390387 TONSLQ96HA7 1378 aa13.2□□□□□ -0.3
TRBV3-1-201ENST00000390387 MAP3K19Q56UN5 1328 aa13.2□□□□□ -0.3
TRBV3-1-201ENST00000390387 QSER1Q2KHR3 1735 aa13.2□□□□□ -0.3
TRBV3-1-201ENST00000390387 NSD2O96028 1365 aa13.2□□□□□ -0.3
TRBV3-1-201ENST00000390387 FBLN1P23142 703 aa13.19□□□□□ -0.3
TRBV3-1-201ENST00000390387 HOXC9P31274 260 aa13.19□□□□□ -0.3
TRBV3-1-201ENST00000390387 C1QBPQ07021 282 aaKnown RBP13.19□□□□□ -0.3
TRBV3-1-201ENST00000390387 SLC27A3Q5K4L6 730 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms