RNA–Protein interactions for RNA: ENST00000390367.3

TRBV11-1-201, Transcript of T cell receptor beta variable 11-1, humanhuman

APPRIS P1 BASIC

Gene TRBV11-1, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1-201ENST00000390367 E9PSI1 815 aa12.91□□□□□ -0.34
TRBV11-1-201ENST00000390367 PRKAR2BP31323 418 aa12.91□□□□□ -0.34
TRBV11-1-201ENST00000390367 NEUROD2Q15784 382 aa12.91□□□□□ -0.34
TRBV11-1-201ENST00000390367 LRRC59Q96AG4 307 aaKnown RBP12.91□□□□□ -0.34
TRBV11-1-201ENST00000390367 RSPH6AQ9H0K4 717 aa12.91□□□□□ -0.34
TRBV11-1-201ENST00000390367 HMOX1P09601 288 aa12.9□□□□□ -0.34
TRBV11-1-201ENST00000390367 SULT6B1Q6IMI4 303 aa12.9□□□□□ -0.34
TRBV11-1-201ENST00000390367 ARHGEF25Q86VW2 580 aa12.9□□□□□ -0.34
TRBV11-1-201ENST00000390367 PLEKHF1Q96S99 279 aa12.9□□□□□ -0.34
TRBV11-1-201ENST00000390367 SLIT3O75094 1523 aa12.89□□□□□ -0.35
TRBV11-1-201ENST00000390367 LTBP4Q8N2S1 1624 aa12.89□□□□□ -0.35
TRBV11-1-201ENST00000390367 TRPM3Q9HCF6 1732 aaPredicted RBP12.89□□□□□ -0.35
TRBV11-1-201ENST00000390367 TMPOP42166 694 aaKnown RBP12.89□□□□□ -0.35
TRBV11-1-201ENST00000390367 RIPK4P57078 832 aa12.89□□□□□ -0.35
TRBV11-1-201ENST00000390367 PXDNQ92626 1479 aa12.89□□□□□ -0.35
TRBV11-1-201ENST00000390367 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
TRBV11-1-201ENST00000390367 NFE2L2Q16236 605 aa12.88□□□□□ -0.35
TRBV11-1-201ENST00000390367 WWC1Q8IX03 1113 aa12.88□□□□□ -0.35
TRBV11-1-201ENST00000390367 DDX17Q92841 729 aaKnown RBP12.88□□□□□ -0.35
TRBV11-1-201ENST00000390367 MYH16Q9H6N6 1097 aa12.88□□□□□ -0.35
TRBV11-1-201ENST00000390367 SENP3-EIF4A1A0A087X0R7 540 aa12.87□□□□□ -0.35
TRBV11-1-201ENST00000390367 LTV1Q96GA3 475 aaPredicted RBP12.87□□□□□ -0.35
TRBV11-1-201ENST00000390367 ZC3H6P61129 1189 aaKnown RBP12.86□□□□□ -0.35
TRBV11-1-201ENST00000390367 GAS2L2Q8NHY3 880 aa12.86□□□□□ -0.35
TRBV11-1-201ENST00000390367 EYA1Q99502 592 aa12.86□□□□□ -0.35
TRBV11-1-201ENST00000390367 RRP7AQ9Y3A4 280 aaKnown RBP12.86□□□□□ -0.35
TRBV11-1-201ENST00000390367 GTF3C3Q9Y5Q9 886 aa12.86□□□□□ -0.35
TRBV11-1-201ENST00000390367 NFAT5O94916 1531 aa12.86□□□□□ -0.35
TRBV11-1-201ENST00000390367 ALS2Q96Q42 1657 aa12.86□□□□□ -0.35
TRBV11-1-201ENST00000390367 ZNF521Q96K83 1311 aa12.86□□□□□ -0.35
TRBV11-1-201ENST00000390367 SLFN5Q08AF3 891 aa12.85□□□□□ -0.35
TRBV11-1-201ENST00000390367 IL16Q14005 1332 aa12.85□□□□□ -0.35
TRBV11-1-201ENST00000390367 IGSF1Q8N6C5 1336 aa12.85□□□□□ -0.35
TRBV11-1-201ENST00000390367 IQSEC2Q5JU85 1478 aa12.85□□□□□ -0.35
TRBV11-1-201ENST00000390367 CPDO75976 1380 aa12.84□□□□□ -0.35
TRBV11-1-201ENST00000390367 CSB-PGBD3P0DP91 1061 aa12.84□□□□□ -0.35
TRBV11-1-201ENST00000390367 ANKRD24Q8TF21 1146 aa12.84□□□□□ -0.35
TRBV11-1-201ENST00000390367 RTF1Q92541 710 aaKnown RBP12.84□□□□□ -0.35
TRBV11-1-201ENST00000390367 PHF23Q9BUL5 403 aaPredicted RBP12.84□□□□□ -0.35
TRBV11-1-201ENST00000390367 SUPT16HQ9Y5B9 1047 aaKnown RBP12.84□□□□□ -0.35
TRBV11-1-201ENST00000390367 UBAP1LF5GYI3 381 aa12.83□□□□□ -0.36
TRBV11-1-201ENST00000390367 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.83□□□□□ -0.36
TRBV11-1-201ENST00000390367 CDCA7LQ96GN5 454 aa12.83□□□□□ -0.36
TRBV11-1-201ENST00000390367 PRDM11Q9NQV5 511 aa12.83□□□□□ -0.36
TRBV11-1-201ENST00000390367 KDRP35968 1356 aa12.82□□□□□ -0.36
TRBV11-1-201ENST00000390367 PEAK1Q9H792 1746 aa12.82□□□□□ -0.36
TRBV11-1-201ENST00000390367 MARF1Q9Y4F3 1742 aaKnown RBP12.82□□□□□ -0.36
TRBV11-1-201ENST00000390367 MED1Q15648 1581 aaPredicted RBP12.82□□□□□ -0.36
TRBV11-1-201ENST00000390367 PHRF1Q9P1Y6 1649 aaKnown RBP12.82□□□□□ -0.36
TRBV11-1-201ENST00000390367 HTATSF1O43719 755 aaKnown RBP12.82□□□□□ -0.36
TRBV11-1-201ENST00000390367 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
TRBV11-1-201ENST00000390367 CABLES1Q8TDN4 633 aa12.82□□□□□ -0.36
TRBV11-1-201ENST00000390367 RCAN3Q9UKA8 241 aa12.82□□□□□ -0.36
TRBV11-1-201ENST00000390367 ABCC6O95255 1503 aa12.82□□□□□ -0.36
TRBV11-1-201ENST00000390367 LTN1O94822 1766 aa12.81□□□□□ -0.36
TRBV11-1-201ENST00000390367 NHSL1Q5SYE7 1610 aa12.81□□□□□ -0.36
TRBV11-1-201ENST00000390367 CT47B1P0C2W7 299 aaPredicted RBP12.81□□□□□ -0.36
TRBV11-1-201ENST00000390367 GNAI1P63096 354 aa12.81□□□□□ -0.36
TRBV11-1-201ENST00000390367 PLEKHO1Q53GL0 409 aaPredicted RBP12.81□□□□□ -0.36
TRBV11-1-201ENST00000390367 DUSP27Q5VZP5 1158 aa12.81□□□□□ -0.36
TRBV11-1-201ENST00000390367 ERICH6BQ5W0A0 696 aa12.81□□□□□ -0.36
TRBV11-1-201ENST00000390367 AEBP1Q8IUX7 1158 aa12.81□□□□□ -0.36
TRBV11-1-201ENST00000390367 TRMT2AQ8IZ69 625 aaKnown RBP12.81□□□□□ -0.36
TRBV11-1-201ENST00000390367 PHACTR3Q96KR7 559 aa12.81□□□□□ -0.36
TRBV11-1-201ENST00000390367 PIP4K2BP78356 416 aa12.8□□□□□ -0.36
TRBV11-1-201ENST00000390367 TRIM35Q9UPQ4 493 aa12.8□□□□□ -0.36
TRBV11-1-201ENST00000390367 AHDC1Q5TGY3 1603 aaPredicted RBP12.8□□□□□ -0.36
TRBV11-1-201ENST00000390367 EVA1CP58658 441 aa12.79□□□□□ -0.36
TRBV11-1-201ENST00000390367 CERKQ8TCT0 537 aa12.79□□□□□ -0.36
TRBV11-1-201ENST00000390367 RAPGEF4Q8WZA2 1011 aa12.79□□□□□ -0.36
TRBV11-1-201ENST00000390367 NLRP2Q9NX02 1062 aa12.79□□□□□ -0.36
TRBV11-1-201ENST00000390367 ERBB3P21860 1342 aa12.79□□□□□ -0.36
TRBV11-1-201ENST00000390367 ROBO1Q9Y6N7 1651 aa12.79□□□□□ -0.36
TRBV11-1-201ENST00000390367 KIAA0232Q92628 1395 aa12.79□□□□□ -0.36
TRBV11-1-201ENST00000390367 NBPF6Q5VWK0 638 aa12.78□□□□□ -0.36
TRBV11-1-201ENST00000390367 NBPF4Q96M43 638 aa12.78□□□□□ -0.36
TRBV11-1-201ENST00000390367 IFT57Q9NWB7 429 aa12.78□□□□□ -0.36
TRBV11-1-201ENST00000390367 PLEKHG2Q9H7P9 1386 aa12.78□□□□□ -0.36
TRBV11-1-201ENST00000390367 GNAT3A8MTJ3 354 aa12.77□□□□□ -0.37
TRBV11-1-201ENST00000390367 TATP17735 454 aaPredicted RBP12.77□□□□□ -0.37
TRBV11-1-201ENST00000390367 AXIN2Q9Y2T1 843 aa12.77□□□□□ -0.37
TRBV11-1-201ENST00000390367 RGPD1P0DJD0 1748 aa12.76□□□□□ -0.37
TRBV11-1-201ENST00000390367 FKBP8Q14318 412 aa12.76□□□□□ -0.37
TRBV11-1-201ENST00000390367 CHRNA2Q15822 529 aa12.76□□□□□ -0.37
TRBV11-1-201ENST00000390367 MTHFSDQ2M296 383 aaKnown RBP12.76□□□□□ -0.37
TRBV11-1-201ENST00000390367 C1orf141Q5JVX7 400 aa12.76□□□□□ -0.37
TRBV11-1-201ENST00000390367 ZNF428Q96B54 188 aa12.76□□□□□ -0.37
TRBV11-1-201ENST00000390367 LAS1LQ9Y4W2 734 aaKnown RBP12.76□□□□□ -0.37
TRBV11-1-201ENST00000390367 TOM1L2Q6ZVM7 507 aa12.75□□□□□ -0.37
TRBV11-1-201ENST00000390367 USHBP1Q8N6Y0 703 aa12.75□□□□□ -0.37
TRBV11-1-201ENST00000390367 CFAP44Q96MT7 982 aa12.75□□□□□ -0.37
TRBV11-1-201ENST00000390367 SPG7Q9UQ90 795 aa12.75□□□□□ -0.37
TRBV11-1-201ENST00000390367 WDR17Q8IZU2 1322 aa12.74□□□□□ -0.37
TRBV11-1-201ENST00000390367 BABAM1Q9NWV8 329 aa12.74□□□□□ -0.37
TRBV11-1-201ENST00000390367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRBV11-1-201ENST00000390367 MS4A1P11836 297 aa12.73□□□□□ -0.37
TRBV11-1-201ENST00000390367 RRP1P56182 461 aaKnown RBP12.73□□□□□ -0.37
TRBV11-1-201ENST00000390367 AKAP4Q5JQC9 854 aa12.73□□□□□ -0.37
TRBV11-1-201ENST00000390367 CHMP4AQ9BY43 222 aa12.73□□□□□ -0.37
TRBV11-1-201ENST00000390367 SPINK5Q9NQ38 1064 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms