RNA–Protein interactions for RNA: ENST00000389463.8

LAMA4-205, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-205ENST00000389463 DDX49Q9Y6V7 483 aaKnown RBP13.26□□□□□ -0.29
LAMA4-205ENST00000389463 ANKRD20A12PQ8NF67 263 aa13.26□□□□□ -0.29
LAMA4-205ENST00000389463 AMOTQ4VCS5 1084 aa13.26□□□□□ -0.29
LAMA4-205ENST00000389463 SIL1Q9H173 461 aa13.26□□□□□ -0.29
LAMA4-205ENST00000389463 UNC13AQ9UPW8 1703 aa13.26□□□□□ -0.29
LAMA4-205ENST00000389463 CT47B1P0C2W7 299 aaPredicted RBP13.26□□□□□ -0.29
LAMA4-205ENST00000389463 CNKSR2Q8WXI2 1034 aa13.26□□□□□ -0.29
LAMA4-205ENST00000389463 PCMTD1Q96MG8 357 aaPredicted RBP13.26□□□□□ -0.29
LAMA4-205ENST00000389463 BICD2Q8TD16 824 aa13.25□□□□□ -0.29
LAMA4-205ENST00000389463 NFE2L2Q16236 605 aa13.25□□□□□ -0.29
LAMA4-205ENST00000389463 ZNF428Q96B54 188 aa13.25□□□□□ -0.29
LAMA4-205ENST00000389463 CDCA7LQ96GN5 454 aa13.25□□□□□ -0.29
LAMA4-205ENST00000389463 IGHMBP2P38935 993 aaKnown RBP13.25□□□□□ -0.29
LAMA4-205ENST00000389463 RRP12Q5JTH9 1297 aaKnown RBP13.25□□□□□ -0.29
LAMA4-205ENST00000389463 MSH6P52701 1360 aa13.25□□□□□ -0.29
LAMA4-205ENST00000389463 SLC4A3P48751 1232 aa13.24□□□□□ -0.29
LAMA4-205ENST00000389463 C1orf115Q9H7X2 142 aa13.24□□□□□ -0.29
LAMA4-205ENST00000389463 EXOC5O00471 708 aa13.24□□□□□ -0.29
LAMA4-205ENST00000389463 TOM1O60784 492 aa13.24□□□□□ -0.29
LAMA4-205ENST00000389463 PTCD1O75127 700 aaKnown RBP13.24□□□□□ -0.29
LAMA4-205ENST00000389463 SKOR2Q2VWA4 1001 aaPredicted RBP13.24□□□□□ -0.29
LAMA4-205ENST00000389463 NACAP1Q9BZK3 213 aa13.24□□□□□ -0.29
LAMA4-205ENST00000389463 ADGRF5Q8IZF2 1346 aa13.23□□□□□ -0.29
LAMA4-205ENST00000389463 ATP2B2Q01814 1243 aa13.23□□□□□ -0.29
LAMA4-205ENST00000389463 NME9Q86XW9 330 aa13.23□□□□□ -0.29
LAMA4-205ENST00000389463 GCC1Q96CN9 775 aa13.23□□□□□ -0.29
LAMA4-205ENST00000389463 ZSCAN25Q6NSZ9 544 aa13.23□□□□□ -0.29
LAMA4-205ENST00000389463 A0A0U1RQG5 324 aaPredicted RBP13.23□□□□□ -0.29
LAMA4-205ENST00000389463 BIVM-ERCC5R4GMW8 1640 aa13.22□□□□□ -0.29
LAMA4-205ENST00000389463 UBAP1LF5GYI3 381 aa13.22□□□□□ -0.29
LAMA4-205ENST00000389463 NOS1P29475 1434 aa13.22□□□□□ -0.29
LAMA4-205ENST00000389463 USHBP1Q8N6Y0 703 aa13.22□□□□□ -0.29
LAMA4-205ENST00000389463 MPRIPQ6WCQ1 1025 aa13.22□□□□□ -0.29
LAMA4-205ENST00000389463 R3HCC1Q9Y3T6 440 aaKnown RBP13.22□□□□□ -0.29
LAMA4-205ENST00000389463 CEP126Q9P2H0 1117 aa13.22□□□□□ -0.29
LAMA4-205ENST00000389463 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.22□□□□□ -0.29
LAMA4-205ENST00000389463 LRRCC1Q9C099 1032 aa13.21□□□□□ -0.29
LAMA4-205ENST00000389463 PDE3AQ14432 1141 aa13.21□□□□□ -0.3
LAMA4-205ENST00000389463 C22orf23Q9BZE7 217 aa13.21□□□□□ -0.3
LAMA4-205ENST00000389463 KDM5BQ9UGL1 1544 aa13.2□□□□□ -0.3
LAMA4-205ENST00000389463 NCOA1Q15788 1441 aa13.2□□□□□ -0.3
LAMA4-205ENST00000389463 RAPGEF6Q8TEU7 1601 aa13.2□□□□□ -0.3
LAMA4-205ENST00000389463 KDM4AO75164 1064 aa13.2□□□□□ -0.3
LAMA4-205ENST00000389463 ZSCAN29Q8IWY8 852 aaPredicted RBP13.2□□□□□ -0.3
LAMA4-205ENST00000389463 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.2□□□□□ -0.3
LAMA4-205ENST00000389463 TMPOP42166 694 aaKnown RBP13.2□□□□□ -0.3
LAMA4-205ENST00000389463 CCDC73Q6ZRK6 1079 aa13.2□□□□□ -0.3
LAMA4-205ENST00000389463 PLCH2O75038 1416 aa13.19□□□□□ -0.3
LAMA4-205ENST00000389463 MAP3K1Q13233 1512 aa13.19□□□□□ -0.3
LAMA4-205ENST00000389463 CALRP27797 417 aaKnown RBP13.19□□□□□ -0.3
LAMA4-205ENST00000389463 FKBP4Q02790 459 aaKnown RBP eCLIP13.19□□□□□ -0.3
LAMA4-205ENST00000389463 TAF7Q15545 349 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-205ENST00000389463 TMOD2Q9NZR1 351 aa13.19□□□□□ -0.3
LAMA4-205ENST00000389463 ATF7IPQ6VMQ6 1270 aa13.18□□□□□ -0.3
LAMA4-205ENST00000389463 SRGAP3O43295 1099 aa13.18□□□□□ -0.3
LAMA4-205ENST00000389463 IPO7O95373 1038 aaKnown RBP13.18□□□□□ -0.3
LAMA4-205ENST00000389463 NUCB2P80303 420 aa13.18□□□□□ -0.3
LAMA4-205ENST00000389463 MCM10Q7L590 875 aa13.18□□□□□ -0.3
LAMA4-205ENST00000389463 RAI14Q9P0K7 980 aa13.18□□□□□ -0.3
LAMA4-205ENST00000389463 WDR7Q9Y4E6 1490 aa13.18□□□□□ -0.3
LAMA4-205ENST00000389463 PATL2C9JE40 543 aaKnown RBP13.18□□□□□ -0.3
LAMA4-205ENST00000389463 AACSQ86V21 672 aa13.18□□□□□ -0.3
LAMA4-205ENST00000389463 CCDC85AQ96PX6 553 aaPredicted RBP13.18□□□□□ -0.3
LAMA4-205ENST00000389463 MIS18AQ9NYP9 233 aa13.18□□□□□ -0.3
LAMA4-205ENST00000389463 UHRF1BP1LA0JNW5 1464 aa13.17□□□□□ -0.3
LAMA4-205ENST00000389463 DUSP27Q5VZP5 1158 aa13.17□□□□□ -0.3
LAMA4-205ENST00000389463 C14orf93Q9H972 538 aaKnown RBP13.17□□□□□ -0.3
LAMA4-205ENST00000389463 BCAR3O75815 825 aa13.17□□□□□ -0.3
LAMA4-205ENST00000389463 HSP90AB3PQ58FF7 597 aa13.17□□□□□ -0.3
LAMA4-205ENST00000389463 TMEM132AQ24JP5 1023 aa13.17□□□□□ -0.3
LAMA4-205ENST00000389463 LARP1Q6PKG0 1096 aaKnown RBP13.17□□□□□ -0.3
LAMA4-205ENST00000389463 THOC2Q8NI27 1593 aaKnown RBP13.17□□□□□ -0.3
LAMA4-205ENST00000389463 STK11IPQ8N1F8 1099 aa13.16□□□□□ -0.3
LAMA4-205ENST00000389463 TSHZ2Q9NRE2 1034 aa13.16□□□□□ -0.3
LAMA4-205ENST00000389463 CHMP5Q9NZZ3 219 aa13.16□□□□□ -0.3
LAMA4-205ENST00000389463 VSIG10Q8N0Z9 540 aa13.16□□□□□ -0.3
LAMA4-205ENST00000389463 KRI1Q8N9T8 703 aaKnown RBP13.16□□□□□ -0.3
LAMA4-205ENST00000389463 LRP2BPQ9P2M1 347 aa13.16□□□□□ -0.3
LAMA4-205ENST00000389463 ZNF518AQ6AHZ1 1483 aa13.16□□□□□ -0.3
LAMA4-205ENST00000389463 WWC2Q6AWC2 1192 aa13.16□□□□□ -0.3
LAMA4-205ENST00000389463 PDZRN3Q9UPQ7 1066 aa13.16□□□□□ -0.3
LAMA4-205ENST00000389463 EMILIN1Q9Y6C2 1016 aa13.16□□□□□ -0.3
LAMA4-205ENST00000389463 A2MP01023 1474 aa13.16□□□□□ -0.3
LAMA4-205ENST00000389463 AK7Q96M32 723 aa13.16□□□□□ -0.3
LAMA4-205ENST00000389463 ATP10BO94823 1461 aa13.16□□□□□ -0.3
LAMA4-205ENST00000389463 METTL24Q5JXM2 366 aa13.15□□□□□ -0.3
LAMA4-205ENST00000389463 SASS6Q6UVJ0 657 aa13.15□□□□□ -0.3
LAMA4-205ENST00000389463 CDK5RAP3Q96JB5 506 aa13.15□□□□□ -0.3
LAMA4-205ENST00000389463 TTC21BQ7Z4L5 1316 aa13.15□□□□□ -0.3
LAMA4-205ENST00000389463 GPATCH8Q9UKJ3 1502 aaKnown RBP13.15□□□□□ -0.31
LAMA4-205ENST00000389463 IFNL2Q8IZJ0 200 aa13.14□□□□□ -0.31
LAMA4-205ENST00000389463 GOLGA6L1Q8N7Z2 621 aa13.14□□□□□ -0.31
LAMA4-205ENST00000389463 RPGRQ92834 1020 aaKnown RBP13.14□□□□□ -0.31
LAMA4-205ENST00000389463 FMNL2Q96PY5 1086 aa13.14□□□□□ -0.31
LAMA4-205ENST00000389463 MYD88Q99836 296 aa13.14□□□□□ -0.31
LAMA4-205ENST00000389463 SCAF11Q99590 1463 aaKnown RBP13.14□□□□□ -0.31
LAMA4-205ENST00000389463 ACEP12821 1306 aa13.14□□□□□ -0.31
LAMA4-205ENST00000389463 CCDC69A6NI79 296 aa13.14□□□□□ -0.31
LAMA4-205ENST00000389463 IFT57Q9NWB7 429 aa13.14□□□□□ -0.31
LAMA4-205ENST00000389463 NPHP3Q7Z494 1330 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms