RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 CSB-PGBD3P0DP91 1061 aa14.1□□□□□ -0.15
IFT88-203ENST00000389373 PELP1Q8IZL8 1130 aaKnown RBP14.1□□□□□ -0.15
IFT88-203ENST00000389373 KLHL34Q8N239 644 aa14.1□□□□□ -0.15
IFT88-203ENST00000389373 ARXQ96QS3 562 aa14.1□□□□□ -0.15
IFT88-203ENST00000389373 CABP2Q9NPB3 220 aa14.09□□□□□ -0.15
IFT88-203ENST00000389373 PEAK1Q9H792 1746 aa14.08□□□□□ -0.16
IFT88-203ENST00000389373 EXOC5O00471 708 aa14.08□□□□□ -0.16
IFT88-203ENST00000389373 SOX12O15370 315 aa14.08□□□□□ -0.16
IFT88-203ENST00000389373 GIGYF1O75420 1035 aaPredicted RBP14.08□□□□□ -0.16
IFT88-203ENST00000389373 STAC3Q96MF2 364 aa14.08□□□□□ -0.16
IFT88-203ENST00000389373 AXIN2Q9Y2T1 843 aa14.08□□□□□ -0.16
IFT88-203ENST00000389373 AATKQ6ZMQ8 1374 aa14.08□□□□□ -0.16
IFT88-203ENST00000389373 PPIP5K1Q6PFW1 1433 aa14.07□□□□□ -0.16
IFT88-203ENST00000389373 SBF2Q86WG5 1849 aa14.07□□□□□ -0.16
IFT88-203ENST00000389373 ACSBG1Q96GR2 724 aa14.07□□□□□ -0.16
IFT88-203ENST00000389373 CDCA7Q9BWT1 371 aaPredicted RBP14.07□□□□□ -0.16
IFT88-203ENST00000389373 ARHGEF28Q8N1W1 1705 aaKnown RBP14.07□□□□□ -0.16
IFT88-203ENST00000389373 LRRC37A3O60309 1634 aa14.06□□□□□ -0.16
IFT88-203ENST00000389373 SGIP1Q9BQI5 828 aa14.06□□□□□ -0.16
IFT88-203ENST00000389373 CABP1Q9NZU7 370 aa14.06□□□□□ -0.16
IFT88-203ENST00000389373 WDR17Q8IZU2 1322 aa14.06□□□□□ -0.16
IFT88-203ENST00000389373 RGPD3A6NKT7 1758 aaPredicted RBP14.06□□□□□ -0.16
IFT88-203ENST00000389373 RGPD4Q7Z3J3 1758 aa14.06□□□□□ -0.16
IFT88-203ENST00000389373 TOPAZ1Q8N9V7 1692 aa14.04□□□□□ -0.16
IFT88-203ENST00000389373 CARD10Q9BWT7 1032 aa14.03□□□□□ -0.16
IFT88-203ENST00000389373 RAB3GAP2Q9H2M9 1393 aa14.03□□□□□ -0.16
IFT88-203ENST00000389373 NBPF1Q3BBV0 1214 aa14.02□□□□□ -0.17
IFT88-203ENST00000389373 BCL9O00512 1426 aa14.01□□□□□ -0.17
IFT88-203ENST00000389373 ARHGEF25Q86VW2 580 aa14.01□□□□□ -0.17
IFT88-203ENST00000389373 CHD4Q14839 1912 aa14.01□□□□□ -0.17
IFT88-203ENST00000389373 USP6P35125 1406 aa14□□□□□ -0.17
IFT88-203ENST00000389373 BRD4O60885 1362 aaPredicted RBP14□□□□□ -0.17
IFT88-203ENST00000389373 CENPJQ9HC77 1338 aaPredicted RBP14□□□□□ -0.17
IFT88-203ENST00000389373 ZNF827Q17R98 1081 aa14□□□□□ -0.17
IFT88-203ENST00000389373 AKAP12Q02952 1782 aa13.99□□□□□ -0.17
IFT88-203ENST00000389373 POLD1P28340 1107 aa13.99□□□□□ -0.17
IFT88-203ENST00000389373 KCNH5Q8NCM2 988 aa13.99□□□□□ -0.17
IFT88-203ENST00000389373 CPSF1Q10570 1443 aaKnown RBP13.98□□□□□ -0.17
IFT88-203ENST00000389373 SLIT3O75094 1523 aa13.98□□□□□ -0.17
IFT88-203ENST00000389373 LRRC4BQ9NT99 713 aa13.97□□□□□ -0.17
IFT88-203ENST00000389373 NLRP2Q9NX02 1062 aa13.97□□□□□ -0.17
IFT88-203ENST00000389373 CCDC7Q96M83 1385 aa13.96□□□□□ -0.17
IFT88-203ENST00000389373 MAP3K5Q99683 1374 aa13.96□□□□□ -0.17
IFT88-203ENST00000389373 TTC21BQ7Z4L5 1316 aa13.96□□□□□ -0.17
IFT88-203ENST00000389373 NLGN2Q8NFZ4 835 aa13.96□□□□□ -0.17
IFT88-203ENST00000389373 COL18A1P39060 1754 aa13.96□□□□□ -0.18
IFT88-203ENST00000389373 SLC16A10Q8TF71 515 aa13.95□□□□□ -0.18
IFT88-203ENST00000389373 WNK3Q9BYP7 1800 aa13.94□□□□□ -0.18
IFT88-203ENST00000389373 MSH5O43196 834 aa13.94□□□□□ -0.18
IFT88-203ENST00000389373 KCNQ4P56696 695 aa13.94□□□□□ -0.18
IFT88-203ENST00000389373 TNS2Q63HR2 1409 aa13.94□□□□□ -0.18
IFT88-203ENST00000389373 ZNF692Q9BU19 519 aaPredicted RBP13.94□□□□□ -0.18
IFT88-203ENST00000389373 TFCP2L1Q9NZI6 479 aa13.94□□□□□ -0.18
IFT88-203ENST00000389373 RGPD5Q99666 1765 aa13.94□□□□□ -0.18
IFT88-203ENST00000389373 IL2RBP14784 551 aa13.93□□□□□ -0.18
IFT88-203ENST00000389373 AKT1S1Q96B36 256 aa13.93□□□□□ -0.18
IFT88-203ENST00000389373 EVC2Q86UK5 1308 aa13.92□□□□□ -0.18
IFT88-203ENST00000389373 PIK3C2AO00443 1686 aa13.92□□□□□ -0.18
IFT88-203ENST00000389373 GRIN3BO60391 1043 aa13.92□□□□□ -0.18
IFT88-203ENST00000389373 DDX54Q8TDD1 881 aaKnown RBP13.92□□□□□ -0.18
IFT88-203ENST00000389373 YBX3P16989 372 aaKnown RBP eCLIP13.91□□□□□ -0.18
IFT88-203ENST00000389373 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.91□□□□□ -0.18
IFT88-203ENST00000389373 SYTL4Q96C24 671 aaPredicted RBP13.91□□□□□ -0.18
IFT88-203ENST00000389373 NHSQ6T4R5 1651 aa13.91□□□□□ -0.18
IFT88-203ENST00000389373 PNPLA7Q6ZV29 1317 aa13.9□□□□□ -0.18
IFT88-203ENST00000389373 TTC21AQ8NDW8 1320 aa13.9□□□□□ -0.18
IFT88-203ENST00000389373 SLC27A3Q5K4L6 730 aa13.9□□□□□ -0.18
IFT88-203ENST00000389373 ZNF526Q8TF50 670 aaPredicted RBP13.9□□□□□ -0.18
IFT88-203ENST00000389373 ANKRD24Q8TF21 1146 aa13.89□□□□□ -0.19
IFT88-203ENST00000389373 PAPPAQ13219 1627 aa13.89□□□□□ -0.19
IFT88-203ENST00000389373 UTRNP46939 3433 aa13.89□□□□□ -0.19
IFT88-203ENST00000389373 KTN1Q86UP2 1357 aaKnown RBP13.88□□□□□ -0.19
IFT88-203ENST00000389373 GPBP1L1Q9HC44 474 aaPredicted RBP13.88□□□□□ -0.19
IFT88-203ENST00000389373 ERBB3P21860 1342 aa13.88□□□□□ -0.19
IFT88-203ENST00000389373 KAT6BQ8WYB5 2073 aa13.87□□□□□ -0.19
IFT88-203ENST00000389373 SHANK3Q9BYB0 1731 aa13.87□□□□□ -0.19
IFT88-203ENST00000389373 KIAA1210Q9ULL0 1709 aa13.87□□□□□ -0.19
IFT88-203ENST00000389373 MSL1Q68DK7 614 aa13.87□□□□□ -0.19
IFT88-203ENST00000389373 QRICH2Q9H0J4 1663 aa13.87□□□□□ -0.19
IFT88-203ENST00000389373 ATP10DQ9P241 1426 aa13.87□□□□□ -0.19
IFT88-203ENST00000389373 BTAF1O14981 1849 aa13.87□□□□□ -0.19
IFT88-203ENST00000389373 TRPM1Q7Z4N2 1603 aa13.86□□□□□ -0.19
IFT88-203ENST00000389373 PRIM1P49642 420 aaKnown RBP13.86□□□□□ -0.19
IFT88-203ENST00000389373 LTV1Q96GA3 475 aaPredicted RBP13.86□□□□□ -0.19
IFT88-203ENST00000389373 ABCC6O95255 1503 aa13.85□□□□□ -0.19
IFT88-203ENST00000389373 HSPA6P17066 643 aa13.85□□□□□ -0.19
IFT88-203ENST00000389373 NME9Q86XW9 330 aa13.85□□□□□ -0.19
IFT88-203ENST00000389373 NFAT5O94916 1531 aa13.85□□□□□ -0.19
IFT88-203ENST00000389373 COL23A1Q86Y22 540 aaPredicted RBP13.84□□□□□ -0.19
IFT88-203ENST00000389373 CCNL1Q9UK58 526 aaPredicted RBP13.83□□□□□ -0.2
IFT88-203ENST00000389373 WWC3Q9ULE0 1092 aa13.83□□□□□ -0.2
IFT88-203ENST00000389373 TMC1Q8TDI8 760 aa13.81□□□□□ -0.2
IFT88-203ENST00000389373 USP31Q70CQ4 1352 aa13.79□□□□□ -0.2
IFT88-203ENST00000389373 HDGFL2Q7Z4V5 671 aaPredicted RBP13.78□□□□□ -0.2
IFT88-203ENST00000389373 ZCRB1Q8TBF4 217 aaKnown RBP13.78□□□□□ -0.2
IFT88-203ENST00000389373 L3MBTL2Q969R5 705 aa13.78□□□□□ -0.2
IFT88-203ENST00000389373 CD2APQ9Y5K6 639 aa13.78□□□□□ -0.2
IFT88-203ENST00000389373 ANKRD36BQ8N2N9 1353 aa13.78□□□□□ -0.2
IFT88-203ENST00000389373 QSER1Q2KHR3 1735 aa13.77□□□□□ -0.21
IFT88-203ENST00000389373 IP6K1Q92551 441 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms