RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 CHMP4AQ9BY43 222 aa5.98□□□□□ -1.45
LTN1-202ENST00000389194 FILIP1Q7Z7B0 1213 aa5.98□□□□□ -1.45
LTN1-202ENST00000389194 CCDC83Q8IWF9 413 aa5.98□□□□□ -1.45
LTN1-202ENST00000389194 BOLA2Q9H3K6 86 aa5.98□□□□□ -1.45
LTN1-202ENST00000389194 TMX1Q9H3N1 280 aa5.98□□□□□ -1.45
LTN1-202ENST00000389194 GPRASP1Q5JY77 1395 aa5.98□□□□□ -1.45
LTN1-202ENST00000389194 NUTM2BA6NNL0 878 aaPredicted RBP5.98□□□□□ -1.45
LTN1-202ENST00000389194 NUTM2EB1AL46 878 aaPredicted RBP5.98□□□□□ -1.45
LTN1-202ENST00000389194 GNAI3P08754 354 aa5.98□□□□□ -1.45
LTN1-202ENST00000389194 PIP4K2AP48426 406 aaPredicted RBP5.98□□□□□ -1.45
LTN1-202ENST00000389194 NUTM2AQ8IVF1 878 aaPredicted RBP5.98□□□□□ -1.45
LTN1-202ENST00000389194 CASTP20810 708 aaKnown RBP5.98□□□□□ -1.45
LTN1-202ENST00000389194 ME1P48163 572 aa5.98□□□□□ -1.45
LTN1-202ENST00000389194 RABEP1Q15276 862 aa5.98□□□□□ -1.45
LTN1-202ENST00000389194 LARP1BQ659C4 914 aaKnown RBP5.98□□□□□ -1.45
LTN1-202ENST00000389194 ANKRD30BQ9BXX2 1392 aa5.98□□□□□ -1.45
LTN1-202ENST00000389194 SPG7Q9UQ90 795 aa5.98□□□□□ -1.45
LTN1-202ENST00000389194 CCDC8Q9H0W5 538 aaPredicted RBP5.97□□□□□ -1.45
LTN1-202ENST00000389194 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.97□□□□□ -1.45
LTN1-202ENST00000389194 ATP2B2Q01814 1243 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 SLC4A8Q2Y0W8 1093 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 BICDL1Q6ZP65 573 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 PANK2Q9BZ23 570 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 ERICH3Q5RHP9 1530 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 ERICH2A1L162 156 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 SEC24BO95487 1268 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 MPRIPQ6WCQ1 1025 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 NUP133Q8WUM0 1156 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 GCC1Q96CN9 775 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 TCEANC2Q96MN5 208 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 PCDHB15Q9Y5E8 787 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 C16orf71Q8IYS4 520 aaPredicted RBP5.97□□□□□ -1.45
LTN1-202ENST00000389194 ZRANB1Q9UGI0 708 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 TOPBP1Q92547 1522 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 TOP2BQ02880 1626 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 SRCIN1Q9C0H9 1055 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 CNNM1Q9NRU3 951 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 SNAPC4Q5SXM2 1469 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 BTBD11A6QL63 1104 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 KRT24Q2M2I5 525 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 PROSER2Q86WR7 435 aaPredicted RBP5.97□□□□□ -1.45
LTN1-202ENST00000389194 MNS1Q8NEH6 495 aa5.97□□□□□ -1.45
LTN1-202ENST00000389194 KINO60870 393 aaKnown RBP5.96□□□□□ -1.45
LTN1-202ENST00000389194 WDR63Q8IWG1 891 aa5.96□□□□□ -1.45
LTN1-202ENST00000389194 NUDT16Q96DE0 195 aaKnown RBP5.96□□□□□ -1.45
LTN1-202ENST00000389194 ISM2Q6H9L7 571 aa5.96□□□□□ -1.45
LTN1-202ENST00000389194 ESPNB1AK53 854 aa5.96□□□□□ -1.46
LTN1-202ENST00000389194 PRPF40BQ6NWY9 871 aaKnown RBP5.96□□□□□ -1.46
LTN1-202ENST00000389194 GAS2L2Q8NHY3 880 aa5.96□□□□□ -1.46
LTN1-202ENST00000389194 UQCRHLA0A096LP55 91 aa5.96□□□□□ -1.46
LTN1-202ENST00000389194 UQCRHP07919 91 aa5.96□□□□□ -1.46
LTN1-202ENST00000389194 CKAP2LQ8IYA6 745 aa5.96□□□□□ -1.46
LTN1-202ENST00000389194 TFIP11Q9UBB9 837 aaKnown RBP5.96□□□□□ -1.46
LTN1-202ENST00000389194 CCDC39Q9UFE4 941 aa5.96□□□□□ -1.46
LTN1-202ENST00000389194 CYP46A1Q9Y6A2 500 aa5.96□□□□□ -1.46
LTN1-202ENST00000389194 EPRSP07814 1512 aaKnown RBP5.96□□□□□ -1.46
LTN1-202ENST00000389194 GRIN2BQ13224 1484 aa5.96□□□□□ -1.46
LTN1-202ENST00000389194 PTPRKQ15262 1439 aa5.96□□□□□ -1.46
LTN1-202ENST00000389194 TPM1P09493 284 aa5.96□□□□□ -1.46
LTN1-202ENST00000389194 STK38Q15208 465 aa5.96□□□□□ -1.46
LTN1-202ENST00000389194 TOM1L2Q6ZVM7 507 aa5.96□□□□□ -1.46
LTN1-202ENST00000389194 TNPO1Q92973 898 aaKnown RBP5.96□□□□□ -1.46
LTN1-202ENST00000389194 ZNF830Q96NB3 372 aaPredicted RBP5.96□□□□□ -1.46
LTN1-202ENST00000389194 TNMDQ9H2S6 317 aa5.96□□□□□ -1.46
LTN1-202ENST00000389194 SUPT6HQ7KZ85 1726 aaKnown RBP5.96□□□□□ -1.46
LTN1-202ENST00000389194 LRRFIP2Q9Y608 721 aaKnown RBP5.96□□□□□ -1.46
LTN1-202ENST00000389194 RTEL1-TNFRSF6BF6WH68 1400 aa5.96□□□□□ -1.46
LTN1-202ENST00000389194 SYNJ2O15056 1496 aa5.96□□□□□ -1.46
LTN1-202ENST00000389194 NCAPD3P42695 1498 aa5.96□□□□□ -1.46
LTN1-202ENST00000389194 HSP90AB4PQ58FF6 505 aa5.95□□□□□ -1.46
LTN1-202ENST00000389194 CEP89Q96ST8 783 aa5.95□□□□□ -1.46
LTN1-202ENST00000389194 ABCC5O15440 1437 aa5.95□□□□□ -1.46
LTN1-202ENST00000389194 TROQ12816 1431 aaPredicted RBP5.95□□□□□ -1.46
LTN1-202ENST00000389194 NINLQ9Y2I6 1382 aa5.95□□□□□ -1.46
LTN1-202ENST00000389194 TAF7Q15545 349 aaPredicted RBP5.95□□□□□ -1.46
LTN1-202ENST00000389194 NFE2L2Q16236 605 aa5.95□□□□□ -1.46
LTN1-202ENST00000389194 IKQ13123 557 aaPredicted RBP5.95□□□□□ -1.46
LTN1-202ENST00000389194 SAFBQ15424 915 aaKnown RBP eCLIP5.95□□□□□ -1.46
LTN1-202ENST00000389194 TTC39AQ5SRH9 613 aa5.95□□□□□ -1.46
LTN1-202ENST00000389194 CABP4P57796 275 aa5.95□□□□□ -1.46
LTN1-202ENST00000389194 EHBP1L1Q8N3D4 1523 aa5.95□□□□□ -1.46
LTN1-202ENST00000389194 FOXO3O43524 673 aa5.95□□□□□ -1.46
LTN1-202ENST00000389194 RLBP1P12271 317 aa5.95□□□□□ -1.46
LTN1-202ENST00000389194 PDRG1Q9NUG6 133 aa5.95□□□□□ -1.46
LTN1-202ENST00000389194 PSMA5P28066 241 aa5.95□□□□□ -1.46
LTN1-202ENST00000389194 CCT2P78371 535 aaKnown RBP5.95□□□□□ -1.46
LTN1-202ENST00000389194 PLEKHO1Q53GL0 409 aaPredicted RBP5.95□□□□□ -1.46
LTN1-202ENST00000389194 CCDC144CPQ8IYA2 1237 aa5.95□□□□□ -1.46
LTN1-202ENST00000389194 NOL10Q9BSC4 688 aaKnown RBP5.95□□□□□ -1.46
LTN1-202ENST00000389194 TRIM34Q9BYJ4 488 aa5.95□□□□□ -1.46
LTN1-202ENST00000389194 IDH1O75874 414 aaKnown RBP5.94□□□□□ -1.46
LTN1-202ENST00000389194 TBC1D9Q6ZT07 1266 aa5.94□□□□□ -1.46
LTN1-202ENST00000389194 NCKAP5LQ9HCH0 1330 aa5.94□□□□□ -1.46
LTN1-202ENST00000389194 PTPN23Q9H3S7 1636 aa5.94□□□□□ -1.46
LTN1-202ENST00000389194 ERICH4A6NGS2 130 aa5.94□□□□□ -1.46
LTN1-202ENST00000389194 IPO7O95373 1038 aaKnown RBP5.94□□□□□ -1.46
LTN1-202ENST00000389194 LRRC2Q9BYS8 371 aa5.94□□□□□ -1.46
LTN1-202ENST00000389194 CFAP65Q6ZU64 1925 aaKnown RBP5.94□□□□□ -1.46
LTN1-202ENST00000389194 ATP5J2-PTCD1G3V325 749 aa5.94□□□□□ -1.46
LTN1-202ENST00000389194 SERPINC1P01008 464 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms