RNA–Protein interactions for RNA: ENST00000383329.7

HLA-C-203, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS ALT2 BASIC

Gene HLA-C, Length 1,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-203ENST00000383329 NUTM2GQ5VZR2 741 aa28.47■■■□□ 2.15
HLA-C-203ENST00000383329 NUDCQ9Y266 331 aa28.46■■■□□ 2.15
HLA-C-203ENST00000383329 CDK12Q9NYV4 1490 aaPredicted RBP28.46■■■□□ 2.15
HLA-C-203ENST00000383329 MAP2P11137 1827 aaKnown RBP28.45■■■□□ 2.14
HLA-C-203ENST00000383329 RGS12O14924 1447 aa28.44■■■□□ 2.14
HLA-C-203ENST00000383329 FAM83GA6ND36 823 aa28.44■■■□□ 2.14
HLA-C-203ENST00000383329 PPM1GO15355 546 aaPredicted RBP28.44■■■□□ 2.14
HLA-C-203ENST00000383329 EMILIN1Q9Y6C2 1016 aa28.44■■■□□ 2.14
HLA-C-203ENST00000383329 PLCH1Q4KWH8 1693 aa28.44■■■□□ 2.14
HLA-C-203ENST00000383329 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.43■■■□□ 2.14
HLA-C-203ENST00000383329 DIAPH1O60610 1272 aaKnown RBP28.43■■■□□ 2.14
HLA-C-203ENST00000383329 UNC5CLQ8IV45 518 aa28.43■■■□□ 2.14
HLA-C-203ENST00000383329 SMG6Q86US8 1419 aaKnown RBP28.43■■■□□ 2.14
HLA-C-203ENST00000383329 PIK3C2AO00443 1686 aa28.43■■■□□ 2.14
HLA-C-203ENST00000383329 RRS1Q15050 365 aaKnown RBP28.42■■■□□ 2.14
HLA-C-203ENST00000383329 ZBED9Q6R2W3 1325 aa28.42■■■□□ 2.14
HLA-C-203ENST00000383329 BLMP54132 1417 aaPredicted RBP28.41■■■□□ 2.14
HLA-C-203ENST00000383329 PHRF1Q9P1Y6 1649 aaKnown RBP28.39■■■□□ 2.14
HLA-C-203ENST00000383329 USP54Q70EL1 1684 aa28.38■■■□□ 2.13
HLA-C-203ENST00000383329 COL3A1P02461 1466 aaPredicted RBP28.38■■■□□ 2.13
HLA-C-203ENST00000383329 KCNH5Q8NCM2 988 aa28.38■■■□□ 2.13
HLA-C-203ENST00000383329 GJD4Q96KN9 370 aaPredicted RBP28.38■■■□□ 2.13
HLA-C-203ENST00000383329 NWD2Q9ULI1 1742 aa28.38■■■□□ 2.13
HLA-C-203ENST00000383329 U2AF1L5P0DN76 240 aaPredicted RBP28.36■■■□□ 2.13
HLA-C-203ENST00000383329 U2AF1Q01081 240 aaKnown RBP eCLIP28.36■■■□□ 2.13
HLA-C-203ENST00000383329 SOX12O15370 315 aa28.35■■■□□ 2.13
HLA-C-203ENST00000383329 COL14A1Q05707 1796 aaKnown RBP28.35■■■□□ 2.13
HLA-C-203ENST00000383329 MAP3K19Q56UN5 1328 aa28.35■■■□□ 2.13
HLA-C-203ENST00000383329 GLI3P10071 1580 aa28.34■■■□□ 2.13
HLA-C-203ENST00000383329 BTG4Q9NY30 223 aa28.34■■■□□ 2.13
HLA-C-203ENST00000383329 U2SURPO15042 1029 aaKnown RBP28.33■■■□□ 2.13
HLA-C-203ENST00000383329 IL13P35225 146 aa28.33■■■□□ 2.13
HLA-C-203ENST00000383329 ZC3H6P61129 1189 aaKnown RBP28.33■■■□□ 2.13
HLA-C-203ENST00000383329 KIAA0232Q92628 1395 aa28.33■■■□□ 2.13
HLA-C-203ENST00000383329 NRAPQ86VF7 1730 aa28.33■■■□□ 2.13
HLA-C-203ENST00000383329 PRDM11Q9NQV5 511 aa28.33■■■□□ 2.12
HLA-C-203ENST00000383329 KIF24Q5T7B8 1368 aa28.32■■■□□ 2.12
HLA-C-203ENST00000383329 USP19O94966 1318 aa28.32■■■□□ 2.12
HLA-C-203ENST00000383329 AMPHP49418 695 aa28.31■■■□□ 2.12
HLA-C-203ENST00000383329 CHRNA2Q15822 529 aa28.31■■■□□ 2.12
HLA-C-203ENST00000383329 VPS72Q15906 364 aa28.31■■■□□ 2.12
HLA-C-203ENST00000383329 RUNDC1Q96C34 613 aa28.31■■■□□ 2.12
HLA-C-203ENST00000383329 PNNQ9H307 717 aaKnown RBP28.31■■■□□ 2.12
HLA-C-203ENST00000383329 NGEFQ8N5V2 710 aa28.3■■■□□ 2.12
HLA-C-203ENST00000383329 GCP02774 474 aa28.29■■■□□ 2.12
HLA-C-203ENST00000383329 CCDC146Q8IYE0 955 aa28.29■■■□□ 2.12
HLA-C-203ENST00000383329 CCDC9Q9Y3X0 531 aaKnown RBP28.29■■■□□ 2.12
HLA-C-203ENST00000383329 FLT4P35916 1363 aa28.28■■■□□ 2.12
HLA-C-203ENST00000383329 FCHSD2O94868 740 aa28.28■■■□□ 2.12
HLA-C-203ENST00000383329 HSP90AB2PQ58FF8 381 aa28.28■■■□□ 2.12
HLA-C-203ENST00000383329 UPF1Q92900 1129 aaKnown RBP eCLIP28.28■■■□□ 2.12
HLA-C-203ENST00000383329 APAF1O14727 1248 aa28.25■■■□□ 2.11
HLA-C-203ENST00000383329 SENP3-EIF4A1A0A087X0R7 540 aa28.24■■■□□ 2.11
HLA-C-203ENST00000383329 EIF4A2Q14240 407 aaKnown RBP28.24■■■□□ 2.11
HLA-C-203ENST00000383329 HOXC9P31274 260 aa28.24■■■□□ 2.11
HLA-C-203ENST00000383329 SLIT3O75094 1523 aa28.23■■■□□ 2.11
HLA-C-203ENST00000383329 PDE3BQ13370 1112 aa28.23■■■□□ 2.11
HLA-C-203ENST00000383329 IP6K1Q92551 441 aa28.23■■■□□ 2.11
HLA-C-203ENST00000383329 SALL2Q9Y467 1007 aaPredicted RBP28.23■■■□□ 2.11
HLA-C-203ENST00000383329 NCBP3Q53F19 620 aaKnown RBP28.22■■■□□ 2.11
HLA-C-203ENST00000383329 ARHGEF25Q86VW2 580 aa28.22■■■□□ 2.11
HLA-C-203ENST00000383329 PLEKHF1Q96S99 279 aa28.22■■■□□ 2.11
HLA-C-203ENST00000383329 NFAT5O94916 1531 aa28.22■■■□□ 2.11
HLA-C-203ENST00000383329 RTL1A6NKG5 1358 aa28.21■■■□□ 2.11
HLA-C-203ENST00000383329 PEAK1Q9H792 1746 aa28.21■■■□□ 2.11
HLA-C-203ENST00000383329 EP400Q96L91 3159 aa28.2■■■□□ 2.11
HLA-C-203ENST00000383329 TCP11L2Q8N4U5 519 aa28.2■■■□□ 2.11
HLA-C-203ENST00000383329 CPDO75976 1380 aa28.2■■■□□ 2.11
HLA-C-203ENST00000383329 BRWD3Q6RI45 1802 aa28.2■■■□□ 2.1
HLA-C-203ENST00000383329 STRN4Q9NRL3 753 aa28.19■■■□□ 2.1
HLA-C-203ENST00000383329 SEPT12Q8IYM1 358 aa28.18■■■□□ 2.1
HLA-C-203ENST00000383329 RSPH6AQ9H0K4 717 aa28.18■■■□□ 2.1
HLA-C-203ENST00000383329 CAMTA1Q9Y6Y1 1673 aa28.18■■■□□ 2.1
HLA-C-203ENST00000383329 ZBTB7CA1YPR0 619 aa28.17■■■□□ 2.1
HLA-C-203ENST00000383329 SPATA31A5Q5VU36 1347 aa28.17■■■□□ 2.1
HLA-C-203ENST00000383329 SPATA31A7Q8IWB4 1347 aa28.17■■■□□ 2.1
HLA-C-203ENST00000383329 LMO7Q8WWI1 1683 aa28.17■■■□□ 2.1
HLA-C-203ENST00000383329 ONECUT3O60422 494 aaPredicted RBP28.16■■■□□ 2.1
HLA-C-203ENST00000383329 NEFMP07197 916 aa28.16■■■□□ 2.1
HLA-C-203ENST00000383329 FAM98CQ17RN3 349 aaKnown RBP28.16■■■□□ 2.1
HLA-C-203ENST00000383329 HMOX1P09601 288 aa28.15■■■□□ 2.1
HLA-C-203ENST00000383329 MAPK8IP3Q9UPT6 1336 aa28.14■■■□□ 2.1
HLA-C-203ENST00000383329 PRKAR2BP31323 418 aa28.13■■■□□ 2.09
HLA-C-203ENST00000383329 ZNF521Q96K83 1311 aa28.13■■■□□ 2.09
HLA-C-203ENST00000383329 A0A0G2JS52 829 aa28.12■■■□□ 2.09
HLA-C-203ENST00000383329 EVA1CP58658 441 aa28.12■■■□□ 2.09
HLA-C-203ENST00000383329 MYT1Q01538 1121 aa28.12■■■□□ 2.09
HLA-C-203ENST00000383329 CCDC27Q2M243 656 aa28.11■■■□□ 2.09
HLA-C-203ENST00000383329 SULT6B1Q6IMI4 303 aa28.11■■■□□ 2.09
HLA-C-203ENST00000383329 EYA1Q99502 592 aa28.11■■■□□ 2.09
HLA-C-203ENST00000383329 SPATA31A1Q5TZJ5 1347 aa28.11■■■□□ 2.09
HLA-C-203ENST00000383329 TMPOP42166 694 aaKnown RBP28.1■■■□□ 2.09
HLA-C-203ENST00000383329 LARP1Q6PKG0 1096 aaKnown RBP28.1■■■□□ 2.09
HLA-C-203ENST00000383329 LTN1O94822 1766 aa28.09■■■□□ 2.09
HLA-C-203ENST00000383329 COL18A1P39060 1754 aa28.09■■■□□ 2.09
HLA-C-203ENST00000383329 NEUROD2Q15784 382 aa28.08■■■□□ 2.09
HLA-C-203ENST00000383329 USP35Q9P2H5 1018 aa28.08■■■□□ 2.09
HLA-C-203ENST00000383329 IGSF1Q8N6C5 1336 aa28.08■■■□□ 2.09
HLA-C-203ENST00000383329 GOLGA2Q08379 1002 aa28.07■■■□□ 2.08
HLA-C-203ENST00000383329 WWC1Q8IX03 1113 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms