RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 UHRF1BP1LA0JNW5 1464 aa18.37■□□□□ 0.53
CTNS-202ENST00000381870 KIAA1210Q9ULL0 1709 aa18.37■□□□□ 0.53
CTNS-202ENST00000381870 ZCCHC11Q5TAX3 1644 aaKnown RBP18.37■□□□□ 0.53
CTNS-202ENST00000381870 PLEKHF1Q96S99 279 aa18.37■□□□□ 0.53
CTNS-202ENST00000381870 U2SURPO15042 1029 aaKnown RBP18.37■□□□□ 0.53
CTNS-202ENST00000381870 ADGRL1O94910 1474 aa18.36■□□□□ 0.53
CTNS-202ENST00000381870 C17orf53Q8N3J3 647 aaPredicted RBP18.36■□□□□ 0.53
CTNS-202ENST00000381870 USP26Q9BXU7 913 aa18.36■□□□□ 0.53
CTNS-202ENST00000381870 GTPBP4Q9BZE4 634 aaKnown RBP18.36■□□□□ 0.53
CTNS-202ENST00000381870 ABCA6Q8N139 1617 aa18.36■□□□□ 0.53
CTNS-202ENST00000381870 PRIMPOLQ96LW4 560 aa18.35■□□□□ 0.53
CTNS-202ENST00000381870 ASXL2Q76L83 1435 aa18.34■□□□□ 0.53
CTNS-202ENST00000381870 TSPY26PQ9H489 355 aa18.34■□□□□ 0.53
CTNS-202ENST00000381870 GTF2F1P35269 517 aaKnown RBP eCLIP18.33■□□□□ 0.53
CTNS-202ENST00000381870 NOLC1Q14978 699 aaKnown RBP eCLIP18.33■□□□□ 0.53
CTNS-202ENST00000381870 HMGN5P82970 282 aaKnown RBP18.33■□□□□ 0.52
CTNS-202ENST00000381870 PIBF1Q8WXW3 757 aa18.33■□□□□ 0.52
CTNS-202ENST00000381870 DNAJC5Q9H3Z4 198 aa18.33■□□□□ 0.52
CTNS-202ENST00000381870 MED14O60244 1454 aa18.33■□□□□ 0.52
CTNS-202ENST00000381870 SPDYE4A6NLX3 237 aa18.32■□□□□ 0.52
CTNS-202ENST00000381870 KIF20AO95235 890 aa18.32■□□□□ 0.52
CTNS-202ENST00000381870 PLEKHM2Q8IWE5 1019 aa18.32■□□□□ 0.52
CTNS-202ENST00000381870 TRAK1Q9UPV9 953 aa18.32■□□□□ 0.52
CTNS-202ENST00000381870 SBNO2Q9Y2G9 1366 aa18.31■□□□□ 0.52
CTNS-202ENST00000381870 ALDH1L2Q3SY69 923 aa18.31■□□□□ 0.52
CTNS-202ENST00000381870 MAP3K4Q9Y6R4 1608 aa18.31■□□□□ 0.52
CTNS-202ENST00000381870 MBD3O95983 291 aa18.31■□□□□ 0.52
CTNS-202ENST00000381870 BBXQ8WY36 941 aaPredicted RBP18.31■□□□□ 0.52
CTNS-202ENST00000381870 TTC12Q9H892 705 aaPredicted RBP18.31■□□□□ 0.52
CTNS-202ENST00000381870 KIF3AQ9Y496 699 aa18.31■□□□□ 0.52
CTNS-202ENST00000381870 IL16Q14005 1332 aa18.31■□□□□ 0.52
CTNS-202ENST00000381870 ST18O60284 1047 aa18.3■□□□□ 0.52
CTNS-202ENST00000381870 BCL2L12Q9HB09 334 aa18.3■□□□□ 0.52
CTNS-202ENST00000381870 LETM1O95202 739 aaPredicted RBP18.3■□□□□ 0.52
CTNS-202ENST00000381870 C16orf71Q8IYS4 520 aaPredicted RBP18.3■□□□□ 0.52
CTNS-202ENST00000381870 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.3■□□□□ 0.52
CTNS-202ENST00000381870 PPRC1Q5VV67 1664 aaKnown RBP18.29■□□□□ 0.52
CTNS-202ENST00000381870 IGSF3O75054 1194 aa18.29■□□□□ 0.52
CTNS-202ENST00000381870 TTC22Q5TAA0 569 aa18.28■□□□□ 0.52
CTNS-202ENST00000381870 MYO3AQ8NEV4 1616 aa18.28■□□□□ 0.52
CTNS-202ENST00000381870 UGGT1Q9NYU2 1555 aa18.28■□□□□ 0.52
CTNS-202ENST00000381870 GTF2E1P29083 439 aaPredicted RBP18.28■□□□□ 0.52
CTNS-202ENST00000381870 USP25Q9UHP3 1055 aa18.27■□□□□ 0.52
CTNS-202ENST00000381870 INTS3Q68E01 1043 aaKnown RBP18.27■□□□□ 0.51
CTNS-202ENST00000381870 PDCL2Q8N4E4 241 aa18.26■□□□□ 0.51
CTNS-202ENST00000381870 MYOM2P54296 1465 aa18.26■□□□□ 0.51
CTNS-202ENST00000381870 FKBP5Q13451 457 aaPredicted RBP18.26■□□□□ 0.51
CTNS-202ENST00000381870 OTUD7AQ8TE49 926 aaPredicted RBP18.26■□□□□ 0.51
CTNS-202ENST00000381870 USP32Q8NFA0 1604 aa18.25■□□□□ 0.51
CTNS-202ENST00000381870 TRAPPC8Q9Y2L5 1435 aa18.25■□□□□ 0.51
CTNS-202ENST00000381870 FOXD4L6Q3SYB3 417 aaPredicted RBP18.25■□□□□ 0.51
CTNS-202ENST00000381870 FOXD4L3Q6VB84 417 aaPredicted RBP18.25■□□□□ 0.51
CTNS-202ENST00000381870 REREQ9P2R6 1566 aa18.25■□□□□ 0.51
CTNS-202ENST00000381870 ATAD2Q6PL18 1390 aa18.25■□□□□ 0.51
CTNS-202ENST00000381870 U2AF2P26368 475 aaKnown RBP eCLIP18.25■□□□□ 0.51
CTNS-202ENST00000381870 MRPL50Q8N5N7 158 aaKnown RBP18.25■□□□□ 0.51
CTNS-202ENST00000381870 GADD45BO75293 160 aaPredicted RBP18.24■□□□□ 0.51
CTNS-202ENST00000381870 FAM69CQ0P6D2 419 aa18.24■□□□□ 0.51
CTNS-202ENST00000381870 GDPD2Q9HCC8 539 aa18.24■□□□□ 0.51
CTNS-202ENST00000381870 SPTLC3Q9NUV7 552 aa18.24■□□□□ 0.51
CTNS-202ENST00000381870 ADCY5O95622 1261 aa18.23■□□□□ 0.51
CTNS-202ENST00000381870 BRD1O95696 1058 aa18.23■□□□□ 0.51
CTNS-202ENST00000381870 SDSP20132 328 aa18.23■□□□□ 0.51
CTNS-202ENST00000381870 CHMP4BQ9H444 224 aaKnown RBP18.23■□□□□ 0.51
CTNS-202ENST00000381870 PIK3R4Q99570 1358 aa18.22■□□□□ 0.51
CTNS-202ENST00000381870 BRPF1P55201 1214 aaPredicted RBP18.22■□□□□ 0.51
CTNS-202ENST00000381870 TSPYL6Q8N831 410 aa18.22■□□□□ 0.51
CTNS-202ENST00000381870 SYAP1Q96A49 352 aaPredicted RBP18.22■□□□□ 0.51
CTNS-202ENST00000381870 TMX3Q96JJ7 454 aa18.22■□□□□ 0.51
CTNS-202ENST00000381870 ELL2O00472 640 aaPredicted RBP18.22■□□□□ 0.51
CTNS-202ENST00000381870 CFAP44Q96MT7 982 aa18.22■□□□□ 0.51
CTNS-202ENST00000381870 VAMP4O75379 141 aa18.21■□□□□ 0.51
CTNS-202ENST00000381870 TMEM132EQ6IEE7 984 aa18.21■□□□□ 0.51
CTNS-202ENST00000381870 PTCH1Q13635 1447 aa18.21■□□□□ 0.51
CTNS-202ENST00000381870 SMARCA5O60264 1052 aaPredicted RBP18.21■□□□□ 0.5
CTNS-202ENST00000381870 PDE4CQ08493 712 aa18.21■□□□□ 0.5
CTNS-202ENST00000381870 INO80Q9ULG1 1556 aaPredicted RBP18.2■□□□□ 0.5
CTNS-202ENST00000381870 QRICH2Q9H0J4 1663 aa18.2■□□□□ 0.5
CTNS-202ENST00000381870 RIOK3O14730 519 aaKnown RBP18.2■□□□□ 0.5
CTNS-202ENST00000381870 GGNBP2Q9H3C7 697 aa18.2■□□□□ 0.5
CTNS-202ENST00000381870 ABCC4O15439 1325 aa18.2■□□□□ 0.5
CTNS-202ENST00000381870 NEK4P51957 841 aa18.2■□□□□ 0.5
CTNS-202ENST00000381870 ARHGAP45Q92619 1136 aa18.2■□□□□ 0.5
CTNS-202ENST00000381870 DCTPP1Q9H773 170 aa18.2■□□□□ 0.5
CTNS-202ENST00000381870 COL3A1P02461 1466 aaPredicted RBP18.2■□□□□ 0.5
CTNS-202ENST00000381870 NSD2O96028 1365 aa18.19■□□□□ 0.5
CTNS-202ENST00000381870 UVSSAQ2YD98 709 aa18.19■□□□□ 0.5
CTNS-202ENST00000381870 APBB1O00213 710 aa18.18■□□□□ 0.5
CTNS-202ENST00000381870 TPRNQ4KMQ1 711 aa18.18■□□□□ 0.5
CTNS-202ENST00000381870 NOL8Q76FK4 1167 aaKnown RBP18.18■□□□□ 0.5
CTNS-202ENST00000381870 ANKRD7Q92527 254 aa18.18■□□□□ 0.5
CTNS-202ENST00000381870 THUMPD2Q9BTF0 503 aaKnown RBP18.18■□□□□ 0.5
CTNS-202ENST00000381870 TMEM51Q9NW97 253 aa18.18■□□□□ 0.5
CTNS-202ENST00000381870 ZC3H13Q5T200 1668 aaKnown RBP18.18■□□□□ 0.5
CTNS-202ENST00000381870 ANKRD36BQ8N2N9 1353 aa18.18■□□□□ 0.5
CTNS-202ENST00000381870 PHF14O94880 888 aa18.18■□□□□ 0.5
CTNS-202ENST00000381870 CASC1Q6TDU7 716 aa18.18■□□□□ 0.5
CTNS-202ENST00000381870 FAM184AQ8NB25 1140 aa18.18■□□□□ 0.5
CTNS-202ENST00000381870 TET3O43151 1660 aa18.18■□□□□ 0.5
CTNS-202ENST00000381870 HCLS1P14317 486 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 921.9 ms