RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 GGNBP2Q9H3C7 697 aa22.27■■□□□ 1.16
SNRPB-201ENST00000381342 CPDO75976 1380 aa22.26■■□□□ 1.15
SNRPB-201ENST00000381342 COL18A1P39060 1754 aa22.26■■□□□ 1.15
SNRPB-201ENST00000381342 FYB1O15117 783 aa22.26■■□□□ 1.15
SNRPB-201ENST00000381342 KRT27Q7Z3Y8 459 aa22.26■■□□□ 1.15
SNRPB-201ENST00000381342 SPATA31A5Q5VU36 1347 aa22.26■■□□□ 1.15
SNRPB-201ENST00000381342 SPATA31A7Q8IWB4 1347 aa22.26■■□□□ 1.15
SNRPB-201ENST00000381342 RGPD5Q99666 1765 aa22.25■■□□□ 1.15
SNRPB-201ENST00000381342 SF3B2Q13435 895 aaKnown RBP22.25■■□□□ 1.15
SNRPB-201ENST00000381342 KCNH5Q8NCM2 988 aa22.25■■□□□ 1.15
SNRPB-201ENST00000381342 COG3Q96JB2 828 aa22.25■■□□□ 1.15
SNRPB-201ENST00000381342 CGNL1Q0VF96 1302 aa22.24■■□□□ 1.15
SNRPB-201ENST00000381342 USP35Q9P2H5 1018 aa22.22■■□□□ 1.15
SNRPB-201ENST00000381342 CAMTA1Q9Y6Y1 1673 aa22.21■■□□□ 1.15
SNRPB-201ENST00000381342 SPATA31A1Q5TZJ5 1347 aa22.21■■□□□ 1.15
SNRPB-201ENST00000381342 ABCC6O95255 1503 aa22.21■■□□□ 1.15
SNRPB-201ENST00000381342 ARHGEF25Q86VW2 580 aa22.18■■□□□ 1.14
SNRPB-201ENST00000381342 KNSTRNQ9Y448 316 aa22.18■■□□□ 1.14
SNRPB-201ENST00000381342 PEAK1Q9H792 1746 aa22.17■■□□□ 1.14
SNRPB-201ENST00000381342 NSD2O96028 1365 aa22.17■■□□□ 1.14
SNRPB-201ENST00000381342 AATKQ6ZMQ8 1374 aa22.17■■□□□ 1.14
SNRPB-201ENST00000381342 LARP1Q6PKG0 1096 aaKnown RBP22.17■■□□□ 1.14
SNRPB-201ENST00000381342 COL5A2P05997 1499 aaPredicted RBP22.16■■□□□ 1.14
SNRPB-201ENST00000381342 TCP11L2Q8N4U5 519 aa22.16■■□□□ 1.14
SNRPB-201ENST00000381342 THRAP3Q9Y2W1 955 aaKnown RBP22.16■■□□□ 1.14
SNRPB-201ENST00000381342 MAP2P11137 1827 aaKnown RBP22.15■■□□□ 1.14
SNRPB-201ENST00000381342 BRWD3Q6RI45 1802 aa22.15■■□□□ 1.14
SNRPB-201ENST00000381342 FBLN1P23142 703 aa22.15■■□□□ 1.14
SNRPB-201ENST00000381342 BLMP54132 1417 aaPredicted RBP22.14■■□□□ 1.14
SNRPB-201ENST00000381342 PER1O15534 1290 aaPredicted RBP22.14■■□□□ 1.13
SNRPB-201ENST00000381342 PDE3BQ13370 1112 aa22.14■■□□□ 1.13
SNRPB-201ENST00000381342 AMER1Q5JTC6 1135 aaPredicted RBP22.14■■□□□ 1.13
SNRPB-201ENST00000381342 BARGINQ6ZT62 677 aa22.14■■□□□ 1.13
SNRPB-201ENST00000381342 CSB-PGBD3P0DP91 1061 aa22.13■■□□□ 1.13
SNRPB-201ENST00000381342 TOM1L2Q6ZVM7 507 aa22.13■■□□□ 1.13
SNRPB-201ENST00000381342 MAP3K19Q56UN5 1328 aa22.12■■□□□ 1.13
SNRPB-201ENST00000381342 RRS1Q15050 365 aaKnown RBP22.11■■□□□ 1.13
SNRPB-201ENST00000381342 AXIN2Q9Y2T1 843 aa22.11■■□□□ 1.13
SNRPB-201ENST00000381342 CRB1P82279 1406 aa22.1■■□□□ 1.13
SNRPB-201ENST00000381342 WNK3Q9BYP7 1800 aa22.1■■□□□ 1.13
SNRPB-201ENST00000381342 TNNT2P45379 298 aaPredicted RBP22.09■■□□□ 1.13
SNRPB-201ENST00000381342 FAM208AQ9UK61 1670 aaKnown RBP22.09■■□□□ 1.13
SNRPB-201ENST00000381342 RTL1A6NKG5 1358 aa22.09■■□□□ 1.13
SNRPB-201ENST00000381342 BAG6P46379 1132 aa22.08■■□□□ 1.13
SNRPB-201ENST00000381342 CNGB1Q14028 1251 aaPredicted RBP22.08■■□□□ 1.13
SNRPB-201ENST00000381342 CC2D1BQ5T0F9 858 aaKnown RBP22.08■■□□□ 1.13
SNRPB-201ENST00000381342 FAM196AQ6ZSG2 479 aa22.08■■□□□ 1.13
SNRPB-201ENST00000381342 RGPD2P0DJD1 1756 aa22.07■■□□□ 1.12
SNRPB-201ENST00000381342 FAM182BQ5T319 152 aa22.07■■□□□ 1.12
SNRPB-201ENST00000381342 MORC1Q86VD1 984 aa22.07■■□□□ 1.12
SNRPB-201ENST00000381342 NPC1L1Q9UHC9 1359 aa22.07■■□□□ 1.12
SNRPB-201ENST00000381342 WDR17Q8IZU2 1322 aa22.06■■□□□ 1.12
SNRPB-201ENST00000381342 EMILIN1Q9Y6C2 1016 aa22.06■■□□□ 1.12
SNRPB-201ENST00000381342 THSD7AQ9UPZ6 1657 aa22.05■■□□□ 1.12
SNRPB-201ENST00000381342 ZNF316A6NFI3 1004 aaPredicted RBP22.05■■□□□ 1.12
SNRPB-201ENST00000381342 HOXC9P31274 260 aa22.05■■□□□ 1.12
SNRPB-201ENST00000381342 AMPHP49418 695 aa22.05■■□□□ 1.12
SNRPB-201ENST00000381342 DDX10Q13206 875 aaKnown RBP22.05■■□□□ 1.12
SNRPB-201ENST00000381342 IP6K1Q92551 441 aa22.05■■□□□ 1.12
SNRPB-201ENST00000381342 FLT4P35916 1363 aa22.04■■□□□ 1.12
SNRPB-201ENST00000381342 DEFB132Q7Z7B7 95 aa22.04■■□□□ 1.12
SNRPB-201ENST00000381342 SMG6Q86US8 1419 aaKnown RBP22.04■■□□□ 1.12
SNRPB-201ENST00000381342 CDCA7Q9BWT1 371 aaPredicted RBP22.03■■□□□ 1.12
SNRPB-201ENST00000381342 ERBB3P21860 1342 aa22.03■■□□□ 1.12
SNRPB-201ENST00000381342 ANKRD24Q8TF21 1146 aa22.02■■□□□ 1.12
SNRPB-201ENST00000381342 CARD10Q9BWT7 1032 aa22.02■■□□□ 1.12
SNRPB-201ENST00000381342 KIF24Q5T7B8 1368 aa22.01■■□□□ 1.11
SNRPB-201ENST00000381342 DDB1Q16531 1140 aa22.01■■□□□ 1.11
SNRPB-201ENST00000381342 POLKQ9UBT6 870 aa22.01■■□□□ 1.11
SNRPB-201ENST00000381342 PPM1GO15355 546 aaPredicted RBP22■■□□□ 1.11
SNRPB-201ENST00000381342 LTV1Q96GA3 475 aaPredicted RBP22■■□□□ 1.11
SNRPB-201ENST00000381342 INSRP06213 1382 aa21.99■■□□□ 1.11
SNRPB-201ENST00000381342 PARP4Q9UKK3 1724 aaKnown RBP21.98■■□□□ 1.11
SNRPB-201ENST00000381342 TRIM37O94972 964 aa21.98■■□□□ 1.11
SNRPB-201ENST00000381342 HSP90AB2PQ58FF8 381 aa21.98■■□□□ 1.11
SNRPB-201ENST00000381342 NLRP2Q9NX02 1062 aa21.98■■□□□ 1.11
SNRPB-201ENST00000381342 LRRC37A3O60309 1634 aa21.97■■□□□ 1.11
SNRPB-201ENST00000381342 EXOC5O00471 708 aa21.96■■□□□ 1.11
SNRPB-201ENST00000381342 RGPD1P0DJD0 1748 aa21.95■■□□□ 1.1
SNRPB-201ENST00000381342 APBA3O96018 575 aa21.95■■□□□ 1.1
SNRPB-201ENST00000381342 EN1Q05925 392 aaPredicted RBP21.95■■□□□ 1.1
SNRPB-201ENST00000381342 EP400Q96L91 3159 aa21.92■■□□□ 1.1
SNRPB-201ENST00000381342 OVOS2A0A0G2JMS6 1433 aa21.91■■□□□ 1.1
SNRPB-201ENST00000381342 DISP2A7MBM2 1401 aa21.91■■□□□ 1.1
SNRPB-201ENST00000381342 PARD3Q8TEW0 1356 aa21.91■■□□□ 1.1
SNRPB-201ENST00000381342 IL2RBP14784 551 aa21.89■■□□□ 1.09
SNRPB-201ENST00000381342 MTHFSP49914 203 aa21.89■■□□□ 1.09
SNRPB-201ENST00000381342 USHBP1Q8N6Y0 703 aa21.89■■□□□ 1.09
SNRPB-201ENST00000381342 COL3A1P02461 1466 aaPredicted RBP21.89■■□□□ 1.09
SNRPB-201ENST00000381342 EIF4A2Q14240 407 aaKnown RBP21.88■■□□□ 1.09
SNRPB-201ENST00000381342 EZH2Q15910 746 aaKnown RBP21.88■■□□□ 1.09
SNRPB-201ENST00000381342 NBPF6Q5VWK0 638 aa21.87■■□□□ 1.09
SNRPB-201ENST00000381342 NBPF4Q96M43 638 aa21.87■■□□□ 1.09
SNRPB-201ENST00000381342 NCAPD2Q15021 1401 aa21.87■■□□□ 1.09
SNRPB-201ENST00000381342 MEGF6O75095 1541 aa21.86■■□□□ 1.09
SNRPB-201ENST00000381342 PPP2R1AP30153 589 aa21.86■■□□□ 1.09
SNRPB-201ENST00000381342 SHANK3Q9BYB0 1731 aa21.86■■□□□ 1.09
SNRPB-201ENST00000381342 MARCH10Q8NA82 808 aaPredicted RBP21.85■■□□□ 1.09
SNRPB-201ENST00000381342 TNS2Q63HR2 1409 aa21.85■■□□□ 1.09
SNRPB-201ENST00000381342 CAMKK2Q96RR4 588 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms