RNA–Protein interactions for RNA: ENST00000381337.6

THUMPD1-201, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 4,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-201ENST00000381337 CCT4P50991 539 aaKnown RBP13.66□□□□□ -0.22
THUMPD1-201ENST00000381337 UVSSAQ2YD98 709 aa13.66□□□□□ -0.22
THUMPD1-201ENST00000381337 SRCIN1Q9C0H9 1055 aa13.66□□□□□ -0.22
THUMPD1-201ENST00000381337 RALGAPBQ86X10 1494 aa13.66□□□□□ -0.22
THUMPD1-201ENST00000381337 CCP110O43303 1012 aa13.66□□□□□ -0.22
THUMPD1-201ENST00000381337 SMARCA5O60264 1052 aaPredicted RBP13.66□□□□□ -0.22
THUMPD1-201ENST00000381337 RASSF8Q8NHQ8 419 aa13.66□□□□□ -0.22
THUMPD1-201ENST00000381337 THUMPD2Q9BTF0 503 aaKnown RBP13.66□□□□□ -0.22
THUMPD1-201ENST00000381337 PDILTQ8N807 584 aa13.66□□□□□ -0.22
THUMPD1-201ENST00000381337 ZNF830Q96NB3 372 aaPredicted RBP13.66□□□□□ -0.22
THUMPD1-201ENST00000381337 TOMM22Q9NS69 142 aa13.66□□□□□ -0.22
THUMPD1-201ENST00000381337 TNNT1P13805 278 aa13.65□□□□□ -0.22
THUMPD1-201ENST00000381337 PTPN14Q15678 1187 aa13.65□□□□□ -0.22
THUMPD1-201ENST00000381337 TAF7LQ5H9L4 462 aa13.65□□□□□ -0.22
THUMPD1-201ENST00000381337 TOPBP1Q92547 1522 aa13.65□□□□□ -0.22
THUMPD1-201ENST00000381337 ABCC11Q96J66 1382 aa13.65□□□□□ -0.22
THUMPD1-201ENST00000381337 AK7Q96M32 723 aa13.65□□□□□ -0.22
THUMPD1-201ENST00000381337 EXOC6BQ9Y2D4 811 aa13.65□□□□□ -0.22
THUMPD1-201ENST00000381337 LEKR1Q6ZMV7 388 aa13.65□□□□□ -0.22
THUMPD1-201ENST00000381337 SPATA32Q96LK8 384 aa13.65□□□□□ -0.22
THUMPD1-201ENST00000381337 C16orf45Q96MC5 204 aaPredicted RBP13.65□□□□□ -0.22
THUMPD1-201ENST00000381337 HOOK1Q9UJC3 728 aaKnown RBP13.65□□□□□ -0.22
THUMPD1-201ENST00000381337 HCLS1P14317 486 aaPredicted RBP13.64□□□□□ -0.23
THUMPD1-201ENST00000381337 ZSCAN31Q96LW9 406 aaPredicted RBP13.64□□□□□ -0.23
THUMPD1-201ENST00000381337 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
THUMPD1-201ENST00000381337 IPO7O95373 1038 aaKnown RBP13.64□□□□□ -0.23
THUMPD1-201ENST00000381337 NEXNQ0ZGT2 675 aa13.64□□□□□ -0.23
THUMPD1-201ENST00000381337 NFE2L2Q16236 605 aa13.64□□□□□ -0.23
THUMPD1-201ENST00000381337 FSD1Q9BTV5 496 aa13.64□□□□□ -0.23
THUMPD1-201ENST00000381337 TRIM29Q14134 588 aa13.64□□□□□ -0.23
THUMPD1-201ENST00000381337 CCDC30Q5VVM6 783 aa13.64□□□□□ -0.23
THUMPD1-201ENST00000381337 FERMT3Q86UX7 667 aa13.64□□□□□ -0.23
THUMPD1-201ENST00000381337 UBXN4Q92575 508 aa13.63□□□□□ -0.23
THUMPD1-201ENST00000381337 CCDC94Q9BW85 323 aaPredicted RBP13.63□□□□□ -0.23
THUMPD1-201ENST00000381337 CALCOCO1Q9P1Z2 691 aa13.63□□□□□ -0.23
THUMPD1-201ENST00000381337 NOL7Q9UMY1 257 aaKnown RBP13.63□□□□□ -0.23
THUMPD1-201ENST00000381337 ZNF330Q9Y3S2 320 aaPredicted RBP13.63□□□□□ -0.23
THUMPD1-201ENST00000381337 CAMK4Q16566 473 aa13.63□□□□□ -0.23
THUMPD1-201ENST00000381337 OLFM4Q6UX06 510 aa13.63□□□□□ -0.23
THUMPD1-201ENST00000381337 MAP4K4O95819 1239 aaPredicted RBP13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 DHX8Q14562 1220 aaKnown RBP13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 SMAP1Q8IYB5 467 aaPredicted RBP13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 JAKMIP1Q96N16 626 aaKnown RBP13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 TTC12Q9H892 705 aaPredicted RBP13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 IL1RAPL2Q9NP60 686 aa13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 PDRG1Q9NUG6 133 aa13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 CAMSAP2Q08AD1 1489 aa13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 KIF18AQ8NI77 898 aa13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 ANKRD1Q15327 319 aa13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 PPP6R1Q9UPN7 881 aa13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 GRIN2BQ13224 1484 aa13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 KIF2AO00139 706 aaPredicted RBP13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 PDIA4P13667 645 aaKnown RBP13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 TERF1P54274 439 aa13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 STK3Q13188 491 aa13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 LRRFIP1Q32MZ4 808 aaKnown RBP13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 ANKRD20A12PQ8NF67 263 aa13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 ZNF396Q96N95 335 aaPredicted RBP13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 TESK2Q96S53 571 aa13.62□□□□□ -0.23
THUMPD1-201ENST00000381337 ABCA10Q8WWZ4 1543 aa13.61□□□□□ -0.23
THUMPD1-201ENST00000381337 CEP57L1Q8IYX8 460 aa13.61□□□□□ -0.23
THUMPD1-201ENST00000381337 ARHGAP5Q13017 1502 aa13.61□□□□□ -0.23
THUMPD1-201ENST00000381337 HIP1O00291 1037 aa13.61□□□□□ -0.23
THUMPD1-201ENST00000381337 SULT6B1Q6IMI4 303 aa13.61□□□□□ -0.23
THUMPD1-201ENST00000381337 BLOC1S2Q6QNY1 142 aa13.61□□□□□ -0.23
THUMPD1-201ENST00000381337 CCDC83Q8IWF9 413 aa13.61□□□□□ -0.23
THUMPD1-201ENST00000381337 GTPBP4Q9BZE4 634 aaKnown RBP13.61□□□□□ -0.23
THUMPD1-201ENST00000381337 BIVM-ERCC5R4GMW8 1640 aa13.61□□□□□ -0.23
THUMPD1-201ENST00000381337 ME1P48163 572 aa13.6□□□□□ -0.23
THUMPD1-201ENST00000381337 TMCO3Q6UWJ1 677 aa13.6□□□□□ -0.23
THUMPD1-201ENST00000381337 TMX3Q96JJ7 454 aa13.6□□□□□ -0.23
THUMPD1-201ENST00000381337 DDX58O95786 925 aaKnown RBP13.6□□□□□ -0.23
THUMPD1-201ENST00000381337 STK38Q15208 465 aa13.6□□□□□ -0.23
THUMPD1-201ENST00000381337 TTC22Q5TAA0 569 aa13.6□□□□□ -0.23
THUMPD1-201ENST00000381337 CWC27Q6UX04 472 aaKnown RBP13.6□□□□□ -0.23
THUMPD1-201ENST00000381337 FAM177A1Q8N128 213 aaPredicted RBP13.6□□□□□ -0.23
THUMPD1-201ENST00000381337 ERCC4Q92889 916 aaPredicted RBP13.6□□□□□ -0.23
THUMPD1-201ENST00000381337 MX1P20591 662 aa13.6□□□□□ -0.23
THUMPD1-201ENST00000381337 RBSNQ9H1K0 784 aa13.6□□□□□ -0.23
THUMPD1-201ENST00000381337 CABP1Q9NZU7 370 aa13.6□□□□□ -0.23
THUMPD1-201ENST00000381337 TRERF1Q96PN7 1200 aa13.59□□□□□ -0.23
THUMPD1-201ENST00000381337 PRAM1Q96QH2 718 aa13.59□□□□□ -0.23
THUMPD1-201ENST00000381337 CFAP45Q9UL16 551 aa13.59□□□□□ -0.23
THUMPD1-201ENST00000381337 HMGXB3Q12766 1538 aa13.59□□□□□ -0.23
THUMPD1-201ENST00000381337 RBM25P49756 843 aaKnown RBP13.59□□□□□ -0.23
THUMPD1-201ENST00000381337 TRDNQ13061 729 aa13.59□□□□□ -0.23
THUMPD1-201ENST00000381337 SERPINC1P01008 464 aa13.59□□□□□ -0.23
THUMPD1-201ENST00000381337 CASTP20810 708 aaKnown RBP13.59□□□□□ -0.23
THUMPD1-201ENST00000381337 UBE2HP62256 183 aa13.59□□□□□ -0.23
THUMPD1-201ENST00000381337 AKAP17AQ02040 695 aaKnown RBP13.58□□□□□ -0.23
THUMPD1-201ENST00000381337 CKAP2LQ8IYA6 745 aa13.58□□□□□ -0.23
THUMPD1-201ENST00000381337 SCAND2PQ9GZW5 306 aaPredicted RBP13.58□□□□□ -0.23
THUMPD1-201ENST00000381337 BBXQ8WY36 941 aaPredicted RBP13.58□□□□□ -0.24
THUMPD1-201ENST00000381337 CLIP2Q9UDT6 1046 aa13.58□□□□□ -0.24
THUMPD1-201ENST00000381337 LIMCH1Q9UPQ0 1083 aa13.58□□□□□ -0.24
THUMPD1-201ENST00000381337 GIMAP6Q6P9H5 292 aa13.58□□□□□ -0.24
THUMPD1-201ENST00000381337 SYNJ2O15056 1496 aa13.57□□□□□ -0.24
THUMPD1-201ENST00000381337 FSD2A1L4K1 749 aa13.57□□□□□ -0.24
THUMPD1-201ENST00000381337 RUFY1Q96T51 708 aa13.57□□□□□ -0.24
THUMPD1-201ENST00000381337 TSPYL1Q9H0U9 437 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms