RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 HOXC9P31274 260 aa17.16■□□□□ 0.34
SMN2-203ENST00000380743 RALBP1Q15311 655 aa17.16■□□□□ 0.34
SMN2-203ENST00000380743 IP6K1Q92551 441 aa17.16■□□□□ 0.34
SMN2-203ENST00000380743 PRKRIP1Q9H875 184 aaPredicted RBP17.16■□□□□ 0.34
SMN2-203ENST00000380743 LMO7Q8WWI1 1683 aa17.16■□□□□ 0.34
SMN2-203ENST00000380743 CAMTA1Q9Y6Y1 1673 aa17.16■□□□□ 0.34
SMN2-203ENST00000380743 PEAK1Q9H792 1746 aa17.16■□□□□ 0.34
SMN2-203ENST00000380743 AFF2P51816 1311 aa17.16■□□□□ 0.34
SMN2-203ENST00000380743 PPP2R1AP30153 589 aa17.16■□□□□ 0.34
SMN2-203ENST00000380743 PLCH1Q4KWH8 1693 aa17.15■□□□□ 0.34
SMN2-203ENST00000380743 BCL9LQ86UU0 1499 aa17.15■□□□□ 0.34
SMN2-203ENST00000380743 MTHFSP49914 203 aa17.15■□□□□ 0.34
SMN2-203ENST00000380743 HSP90AB2PQ58FF8 381 aa17.15■□□□□ 0.34
SMN2-203ENST00000380743 SMG6Q86US8 1419 aaKnown RBP17.15■□□□□ 0.34
SMN2-203ENST00000380743 RTL1A6NKG5 1358 aa17.14■□□□□ 0.33
SMN2-203ENST00000380743 FLT4P35916 1363 aa17.14■□□□□ 0.33
SMN2-203ENST00000380743 KIF24Q5T7B8 1368 aa17.14■□□□□ 0.33
SMN2-203ENST00000380743 USP21Q9UK80 565 aa17.14■□□□□ 0.33
SMN2-203ENST00000380743 ABCC6O95255 1503 aa17.13■□□□□ 0.33
SMN2-203ENST00000380743 RGPD5Q99666 1765 aa17.13■□□□□ 0.33
SMN2-203ENST00000380743 DIEXFQ68CQ4 756 aaKnown RBP17.12■□□□□ 0.33
SMN2-203ENST00000380743 UNC5CLQ8IV45 518 aa17.12■□□□□ 0.33
SMN2-203ENST00000380743 STRN4Q9NRL3 753 aa17.12■□□□□ 0.33
SMN2-203ENST00000380743 COL5A2P05997 1499 aaPredicted RBP17.12■□□□□ 0.33
SMN2-203ENST00000380743 NWD2Q9ULI1 1742 aa17.12■□□□□ 0.33
SMN2-203ENST00000380743 BLMP54132 1417 aaPredicted RBP17.12■□□□□ 0.33
SMN2-203ENST00000380743 ANP32CO43423 234 aa17.11■□□□□ 0.33
SMN2-203ENST00000380743 EVA1CP58658 441 aa17.11■□□□□ 0.33
SMN2-203ENST00000380743 RGS17Q9UGC6 210 aaPredicted RBP17.11■□□□□ 0.33
SMN2-203ENST00000380743 INSRP06213 1382 aa17.11■□□□□ 0.33
SMN2-203ENST00000380743 ANKRD24Q8TF21 1146 aa17.11■□□□□ 0.33
SMN2-203ENST00000380743 LTV1Q96GA3 475 aaPredicted RBP17.11■□□□□ 0.33
SMN2-203ENST00000380743 ERBB3P21860 1342 aa17.1■□□□□ 0.33
SMN2-203ENST00000380743 NRAPQ86VF7 1730 aa17.1■□□□□ 0.33
SMN2-203ENST00000380743 LARP1Q6PKG0 1096 aaKnown RBP17.1■□□□□ 0.33
SMN2-203ENST00000380743 MYBBP1AQ9BQG0 1328 aaKnown RBP17.1■□□□□ 0.33
SMN2-203ENST00000380743 CDK12Q9NYV4 1490 aaPredicted RBP17.09■□□□□ 0.33
SMN2-203ENST00000380743 ZNF772Q68DY9 489 aaPredicted RBP17.08■□□□□ 0.32
SMN2-203ENST00000380743 WDR17Q8IZU2 1322 aa17.08■□□□□ 0.32
SMN2-203ENST00000380743 CSB-PGBD3P0DP91 1061 aa17.07■□□□□ 0.32
SMN2-203ENST00000380743 EIF4A2Q14240 407 aaKnown RBP17.07■□□□□ 0.32
SMN2-203ENST00000380743 QTRT2Q9H974 415 aaKnown RBP17.07■□□□□ 0.32
SMN2-203ENST00000380743 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.07■□□□□ 0.32
SMN2-203ENST00000380743 VPS72Q15906 364 aa17.06■□□□□ 0.32
SMN2-203ENST00000380743 ATRNO75882 1429 aa17.06■□□□□ 0.32
SMN2-203ENST00000380743 TOM1L2Q6ZVM7 507 aa17.06■□□□□ 0.32
SMN2-203ENST00000380743 PIAS4Q8N2W9 510 aaPredicted RBP17.06■□□□□ 0.32
SMN2-203ENST00000380743 TRPC5Q9UL62 973 aaPredicted RBP17.06■□□□□ 0.32
SMN2-203ENST00000380743 COL3A1P02461 1466 aaPredicted RBP17.05■□□□□ 0.32
SMN2-203ENST00000380743 IL13P35225 146 aa17.05■□□□□ 0.32
SMN2-203ENST00000380743 NLRP2Q9NX02 1062 aa17.05■□□□□ 0.32
SMN2-203ENST00000380743 CRB1P82279 1406 aa17.04■□□□□ 0.32
SMN2-203ENST00000380743 SPATA31A5Q5VU36 1347 aa17.04■□□□□ 0.32
SMN2-203ENST00000380743 SPATA31A7Q8IWB4 1347 aa17.04■□□□□ 0.32
SMN2-203ENST00000380743 NBPF6Q5VWK0 638 aa17.04■□□□□ 0.32
SMN2-203ENST00000380743 NBPF4Q96M43 638 aa17.04■□□□□ 0.32
SMN2-203ENST00000380743 CFAP53Q96M91 514 aa17.04■□□□□ 0.32
SMN2-203ENST00000380743 USP35Q9P2H5 1018 aa17.04■□□□□ 0.32
SMN2-203ENST00000380743 CCDC9Q9Y3X0 531 aaKnown RBP17.04■□□□□ 0.32
SMN2-203ENST00000380743 SPATA31A1Q5TZJ5 1347 aa17.03■□□□□ 0.32
SMN2-203ENST00000380743 DIAPH1O60610 1272 aaKnown RBP17.03■□□□□ 0.32
SMN2-203ENST00000380743 POTEAQ6S8J7 498 aa17.03■□□□□ 0.32
SMN2-203ENST00000380743 CARD10Q9BWT7 1032 aa17.03■□□□□ 0.32
SMN2-203ENST00000380743 GJD4Q96KN9 370 aaPredicted RBP17.02■□□□□ 0.32
SMN2-203ENST00000380743 EYA1Q99502 592 aa17.02■□□□□ 0.32
SMN2-203ENST00000380743 USHBP1Q8N6Y0 703 aa17.01■□□□□ 0.31
SMN2-203ENST00000380743 RGPD2P0DJD1 1756 aa17.01■□□□□ 0.31
SMN2-203ENST00000380743 CCDC184Q52MB2 194 aa17.01■□□□□ 0.31
SMN2-203ENST00000380743 TCP11L2Q8N4U5 519 aa17■□□□□ 0.31
SMN2-203ENST00000380743 GLI3P10071 1580 aa16.99■□□□□ 0.31
SMN2-203ENST00000380743 FAM208AQ9UK61 1670 aaKnown RBP16.99■□□□□ 0.31
SMN2-203ENST00000380743 IGSF1Q8N6C5 1336 aa16.98■□□□□ 0.31
SMN2-203ENST00000380743 RBM6P78332 1123 aaKnown RBP16.98■□□□□ 0.31
SMN2-203ENST00000380743 MIER1Q8N108 512 aa16.98■□□□□ 0.31
SMN2-203ENST00000380743 U2SURPO15042 1029 aaKnown RBP16.97■□□□□ 0.31
SMN2-203ENST00000380743 RXRBP28702 533 aa16.97■□□□□ 0.31
SMN2-203ENST00000380743 FAM98CQ17RN3 349 aaKnown RBP16.97■□□□□ 0.31
SMN2-203ENST00000380743 THRAP3Q9Y2W1 955 aaKnown RBP16.97■□□□□ 0.31
SMN2-203ENST00000380743 RGPD1P0DJD0 1748 aa16.97■□□□□ 0.31
SMN2-203ENST00000380743 NCAPD2Q15021 1401 aa16.97■□□□□ 0.31
SMN2-203ENST00000380743 BARGINQ6ZT62 677 aa16.96■□□□□ 0.31
SMN2-203ENST00000380743 AEBP1Q8IUX7 1158 aa16.96■□□□□ 0.31
SMN2-203ENST00000380743 SULT6B1Q6IMI4 303 aa16.96■□□□□ 0.3
SMN2-203ENST00000380743 NUDCQ9Y266 331 aa16.96■□□□□ 0.3
SMN2-203ENST00000380743 EP400Q96L91 3159 aa16.96■□□□□ 0.3
SMN2-203ENST00000380743 ONECUT3O60422 494 aaPredicted RBP16.95■□□□□ 0.3
SMN2-203ENST00000380743 HMOX1P09601 288 aa16.95■□□□□ 0.3
SMN2-203ENST00000380743 MRS2Q9HD23 443 aa16.94■□□□□ 0.3
SMN2-203ENST00000380743 KDRP35968 1356 aa16.93■□□□□ 0.3
SMN2-203ENST00000380743 U2AF1L5P0DN76 240 aaPredicted RBP16.93■□□□□ 0.3
SMN2-203ENST00000380743 IL2RBP14784 551 aa16.93■□□□□ 0.3
SMN2-203ENST00000380743 U2AF1Q01081 240 aaKnown RBP eCLIP16.93■□□□□ 0.3
SMN2-203ENST00000380743 DISP2A7MBM2 1401 aa16.93■□□□□ 0.3
SMN2-203ENST00000380743 MEGF6O75095 1541 aa16.92■□□□□ 0.3
SMN2-203ENST00000380743 SEPT12Q8IYM1 358 aa16.91■□□□□ 0.3
SMN2-203ENST00000380743 RAPGEF4Q8WZA2 1011 aa16.91■□□□□ 0.3
SMN2-203ENST00000380743 A0A0G2JS52 829 aa16.91■□□□□ 0.3
SMN2-203ENST00000380743 MYT1Q01538 1121 aa16.91■□□□□ 0.3
SMN2-203ENST00000380743 CDCA7Q9BWT1 371 aaPredicted RBP16.91■□□□□ 0.3
SMN2-203ENST00000380743 WNK3Q9BYP7 1800 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms