RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 CAGE1Q8TC20 777 aa19.09■□□□□ 0.65
COL2A1-202ENST00000380518 THEMISQ8N1K5 641 aaPredicted RBP19.09■□□□□ 0.65
COL2A1-202ENST00000380518 CIZ1Q9ULV3 898 aaPredicted RBP19.09■□□□□ 0.65
COL2A1-202ENST00000380518 KRT85P78386 507 aa19.09■□□□□ 0.65
COL2A1-202ENST00000380518 DHX8Q14562 1220 aaKnown RBP19.08■□□□□ 0.65
COL2A1-202ENST00000380518 GNL3LQ9NVN8 582 aaKnown RBP19.08■□□□□ 0.65
COL2A1-202ENST00000380518 RTEL1-TNFRSF6BF6WH68 1400 aa19.08■□□□□ 0.64
COL2A1-202ENST00000380518 IKQ13123 557 aaPredicted RBP19.08■□□□□ 0.64
COL2A1-202ENST00000380518 RPAP2Q8IXW5 612 aaPredicted RBP19.08■□□□□ 0.64
COL2A1-202ENST00000380518 CEBPZQ03701 1054 aaKnown RBP19.08■□□□□ 0.64
COL2A1-202ENST00000380518 BRPF3Q9ULD4 1205 aa19.07■□□□□ 0.64
COL2A1-202ENST00000380518 CCDC184Q52MB2 194 aa19.07■□□□□ 0.64
COL2A1-202ENST00000380518 TRIM22Q8IYM9 498 aa19.06■□□□□ 0.64
COL2A1-202ENST00000380518 NACAP1Q9BZK3 213 aa19.06■□□□□ 0.64
COL2A1-202ENST00000380518 MAGEC2Q9UBF1 373 aaPredicted RBP19.06■□□□□ 0.64
COL2A1-202ENST00000380518 SYNJ1O43426 1573 aa19.06■□□□□ 0.64
COL2A1-202ENST00000380518 CDK5RAP3Q96JB5 506 aa19.06■□□□□ 0.64
COL2A1-202ENST00000380518 SIL1Q9H173 461 aa19.06■□□□□ 0.64
COL2A1-202ENST00000380518 CABP4P57796 275 aa19.05■□□□□ 0.64
COL2A1-202ENST00000380518 TTLL5Q6EMB2 1281 aa19.05■□□□□ 0.64
COL2A1-202ENST00000380518 SRGAP3O43295 1099 aa19.05■□□□□ 0.64
COL2A1-202ENST00000380518 LARP1BQ659C4 914 aaKnown RBP19.05■□□□□ 0.64
COL2A1-202ENST00000380518 BLOC1S2Q6QNY1 142 aa19.05■□□□□ 0.64
COL2A1-202ENST00000380518 DAPK1P53355 1430 aa19.05■□□□□ 0.64
COL2A1-202ENST00000380518 SLFN5Q08AF3 891 aa19.05■□□□□ 0.64
COL2A1-202ENST00000380518 TNMDQ9H2S6 317 aa19.05■□□□□ 0.64
COL2A1-202ENST00000380518 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.05■□□□□ 0.64
COL2A1-202ENST00000380518 NOM1Q5C9Z4 860 aaKnown RBP19.05■□□□□ 0.64
COL2A1-202ENST00000380518 ME1P48163 572 aa19.04■□□□□ 0.64
COL2A1-202ENST00000380518 BCL11BQ9C0K0 894 aaPredicted RBP19.04■□□□□ 0.64
COL2A1-202ENST00000380518 SPG7Q9UQ90 795 aa19.04■□□□□ 0.64
COL2A1-202ENST00000380518 STK3Q13188 491 aa19.04■□□□□ 0.64
COL2A1-202ENST00000380518 ZSCAN31Q96LW9 406 aaPredicted RBP19.03■□□□□ 0.64
COL2A1-202ENST00000380518 NFE2L2Q16236 605 aa19.03■□□□□ 0.64
COL2A1-202ENST00000380518 TIAM1Q13009 1591 aa19.03■□□□□ 0.64
COL2A1-202ENST00000380518 CCAR1Q8IX12 1150 aaKnown RBP19.03■□□□□ 0.64
COL2A1-202ENST00000380518 STRN4Q9NRL3 753 aa19.03■□□□□ 0.64
COL2A1-202ENST00000380518 ZSCAN25Q6NSZ9 544 aa19.02■□□□□ 0.64
COL2A1-202ENST00000380518 AACSQ86V21 672 aa19.02■□□□□ 0.64
COL2A1-202ENST00000380518 SPC24Q8NBT2 197 aa19.02■□□□□ 0.64
COL2A1-202ENST00000380518 GRPEL1Q9HAV7 217 aa19.02■□□□□ 0.64
COL2A1-202ENST00000380518 TMPOP42166 694 aaKnown RBP19.02■□□□□ 0.64
COL2A1-202ENST00000380518 BRPF1P55201 1214 aaPredicted RBP19.02■□□□□ 0.64
COL2A1-202ENST00000380518 SERPINC1P01008 464 aa19.02■□□□□ 0.64
COL2A1-202ENST00000380518 MCM4P33991 863 aa19.02■□□□□ 0.64
COL2A1-202ENST00000380518 ZFYVE27Q5T4F4 411 aa19.02■□□□□ 0.64
COL2A1-202ENST00000380518 PDIA4P13667 645 aaKnown RBP19.01■□□□□ 0.63
COL2A1-202ENST00000380518 CCDC57Q2TAC2 916 aa19.01■□□□□ 0.63
COL2A1-202ENST00000380518 DACH1Q9UI36 760 aa19.01■□□□□ 0.63
COL2A1-202ENST00000380518 MYO6Q9UM54 1294 aa19.01■□□□□ 0.63
COL2A1-202ENST00000380518 HSP90AB2PQ58FF8 381 aa19.01■□□□□ 0.63
COL2A1-202ENST00000380518 KRT32Q14532 448 aa19.01■□□□□ 0.63
COL2A1-202ENST00000380518 ZNHIT6Q9NWK9 470 aaKnown RBP19.01■□□□□ 0.63
COL2A1-202ENST00000380518 MAP4K4O95819 1239 aaPredicted RBP19■□□□□ 0.63
COL2A1-202ENST00000380518 CTNNA3Q9UI47 895 aa19■□□□□ 0.63
COL2A1-202ENST00000380518 RRS1Q15050 365 aaKnown RBP19■□□□□ 0.63
COL2A1-202ENST00000380518 PDRG1Q9NUG6 133 aa19■□□□□ 0.63
COL2A1-202ENST00000380518 CEP126Q9P2H0 1117 aa19■□□□□ 0.63
COL2A1-202ENST00000380518 RDXP35241 583 aaKnown RBP18.99■□□□□ 0.63
COL2A1-202ENST00000380518 TMEM57Q8N5G2 664 aa18.99■□□□□ 0.63
COL2A1-202ENST00000380518 PPP6R1Q9UPN7 881 aa18.99■□□□□ 0.63
COL2A1-202ENST00000380518 TOM1L2Q6ZVM7 507 aa18.99■□□□□ 0.63
COL2A1-202ENST00000380518 HECW1Q76N89 1606 aa18.99■□□□□ 0.63
COL2A1-202ENST00000380518 KRT18P05783 430 aaKnown RBP18.99■□□□□ 0.63
COL2A1-202ENST00000380518 MYL6BP14649 208 aa18.99■□□□□ 0.63
COL2A1-202ENST00000380518 JAKMIP1Q96N16 626 aaKnown RBP18.99■□□□□ 0.63
COL2A1-202ENST00000380518 IL1RAPL2Q9NP60 686 aa18.99■□□□□ 0.63
COL2A1-202ENST00000380518 CFAP45Q9UL16 551 aa18.99■□□□□ 0.63
COL2A1-202ENST00000380518 NSD3Q9BZ95 1437 aa18.99■□□□□ 0.63
COL2A1-202ENST00000380518 CCDC69A6NI79 296 aa18.98■□□□□ 0.63
COL2A1-202ENST00000380518 CDKL5O76039 1030 aa18.98■□□□□ 0.63
COL2A1-202ENST00000380518 CWC15Q9P013 229 aaKnown RBP18.98■□□□□ 0.63
COL2A1-202ENST00000380518 DCTN1Q14203 1278 aa18.98■□□□□ 0.63
COL2A1-202ENST00000380518 MPHOSPH8Q99549 860 aa18.98■□□□□ 0.63
COL2A1-202ENST00000380518 CCDC61Q9Y6R9 512 aa18.98■□□□□ 0.63
COL2A1-202ENST00000380518 IFT140Q96RY7 1462 aa18.98■□□□□ 0.63
COL2A1-202ENST00000380518 STIM1Q13586 685 aa18.98■□□□□ 0.63
COL2A1-202ENST00000380518 PPFIBP1Q86W92 1011 aa18.98■□□□□ 0.63
COL2A1-202ENST00000380518 SPATA32Q96LK8 384 aa18.98■□□□□ 0.63
COL2A1-202ENST00000380518 WDR97A6NE52 1622 aa18.97■□□□□ 0.63
COL2A1-202ENST00000380518 CWC27Q6UX04 472 aaKnown RBP18.97■□□□□ 0.63
COL2A1-202ENST00000380518 NAIPQ13075 1403 aa18.97■□□□□ 0.63
COL2A1-202ENST00000380518 DDX54Q8TDD1 881 aaKnown RBP18.97■□□□□ 0.63
COL2A1-202ENST00000380518 BTBD11A6QL63 1104 aa18.97■□□□□ 0.63
COL2A1-202ENST00000380518 FKBP4Q02790 459 aaKnown RBP eCLIP18.97■□□□□ 0.63
COL2A1-202ENST00000380518 SLC26A8Q96RN1 970 aa18.96■□□□□ 0.63
COL2A1-202ENST00000380518 LUC7LQ9NQ29 371 aaKnown RBP18.96■□□□□ 0.63
COL2A1-202ENST00000380518 NOL7Q9UMY1 257 aaKnown RBP18.96■□□□□ 0.63
COL2A1-202ENST00000380518 CEP57L1Q8IYX8 460 aa18.95■□□□□ 0.62
COL2A1-202ENST00000380518 CCDC112Q8NEF3 446 aa18.95■□□□□ 0.62
COL2A1-202ENST00000380518 CNKSR2Q8WXI2 1034 aa18.95■□□□□ 0.62
COL2A1-202ENST00000380518 NUP62CLQ9H1M0 184 aa18.95■□□□□ 0.62
COL2A1-202ENST00000380518 CBFA2T2O43439 604 aa18.95■□□□□ 0.62
COL2A1-202ENST00000380518 MRC2Q9UBG0 1479 aa18.94■□□□□ 0.62
COL2A1-202ENST00000380518 CCDC66A2RUB6 948 aa18.94■□□□□ 0.62
COL2A1-202ENST00000380518 NUP133Q8WUM0 1156 aa18.94■□□□□ 0.62
COL2A1-202ENST00000380518 SYCP1Q15431 976 aa18.94■□□□□ 0.62
COL2A1-202ENST00000380518 KLHL34Q8N239 644 aa18.94■□□□□ 0.62
COL2A1-202ENST00000380518 H0YHG0 523 aa18.93■□□□□ 0.62
COL2A1-202ENST00000380518 NUDT16Q96DE0 195 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms