RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 STIM1Q13586 685 aa14.69□□□□□ -0.06
CHD3-203ENST00000380358 CEP63Q96MT8 703 aa14.69□□□□□ -0.06
CHD3-203ENST00000380358 TICAM2Q86XR7 235 aa14.69□□□□□ -0.06
CHD3-203ENST00000380358 SMC1AQ14683 1233 aaKnown RBP14.69□□□□□ -0.06
CHD3-203ENST00000380358 LRP2BPQ9P2M1 347 aa14.69□□□□□ -0.06
CHD3-203ENST00000380358 ARL1P40616 181 aaPredicted RBP14.68□□□□□ -0.06
CHD3-203ENST00000380358 MRPS9P82933 396 aaKnown RBP14.68□□□□□ -0.06
CHD3-203ENST00000380358 CCDC82Q8N4S0 544 aa14.68□□□□□ -0.06
CHD3-203ENST00000380358 KIF15Q9NS87 1388 aa14.68□□□□□ -0.06
CHD3-203ENST00000380358 FHAD1B1AJZ9 1412 aa14.68□□□□□ -0.06
CHD3-203ENST00000380358 KIAA1328Q86T90 577 aa14.68□□□□□ -0.06
CHD3-203ENST00000380358 CRACR2BQ8N4Y2 399 aaPredicted RBP14.68□□□□□ -0.06
CHD3-203ENST00000380358 TERF1P54274 439 aa14.68□□□□□ -0.06
CHD3-203ENST00000380358 DYDC1Q8WWB3 177 aa14.68□□□□□ -0.06
CHD3-203ENST00000380358 RAB3GAP2Q9H2M9 1393 aa14.68□□□□□ -0.06
CHD3-203ENST00000380358 CFAP45Q9UL16 551 aa14.67□□□□□ -0.06
CHD3-203ENST00000380358 SPTY2D1Q68D10 685 aaPredicted RBP14.67□□□□□ -0.06
CHD3-203ENST00000380358 CEP164Q9UPV0 1460 aa14.67□□□□□ -0.06
CHD3-203ENST00000380358 ROCK1Q13464 1354 aa14.67□□□□□ -0.06
CHD3-203ENST00000380358 C11orf95C9JLR9 678 aaPredicted RBP14.67□□□□□ -0.06
CHD3-203ENST00000380358 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.67□□□□□ -0.061e-6■■■□□ 15.6
CHD3-203ENST00000380358 TRIM21P19474 475 aaKnown RBP14.67□□□□□ -0.06
CHD3-203ENST00000380358 NUCB2P80303 420 aa14.67□□□□□ -0.06
CHD3-203ENST00000380358 CCDC57Q2TAC2 916 aa14.66□□□□□ -0.06
CHD3-203ENST00000380358 TRIM22Q8IYM9 498 aa14.66□□□□□ -0.06
CHD3-203ENST00000380358 MINDY4BA8MYZ0 360 aa14.66□□□□□ -0.06
CHD3-203ENST00000380358 IDH1O75874 414 aaKnown RBP14.66□□□□□ -0.06
CHD3-203ENST00000380358 CCDC102AQ96A19 550 aa14.66□□□□□ -0.06
CHD3-203ENST00000380358 TDRD9Q8NDG6 1382 aaKnown RBP14.66□□□□□ -0.06
CHD3-203ENST00000380358 TMCO5BA8MYB1 307 aa14.66□□□□□ -0.06
CHD3-203ENST00000380358 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.66□□□□□ -0.06
CHD3-203ENST00000380358 MAP2K1Q02750 393 aaPredicted RBP14.66□□□□□ -0.06
CHD3-203ENST00000380358 EIF5P55010 431 aaKnown RBP14.66□□□□□ -0.06
CHD3-203ENST00000380358 TSPY26PQ9H489 355 aa14.66□□□□□ -0.06
CHD3-203ENST00000380358 MMRN2Q9H8L6 949 aa14.66□□□□□ -0.06
CHD3-203ENST00000380358 HOMER2Q9NSB8 354 aa14.66□□□□□ -0.06
CHD3-203ENST00000380358 ADAMTS2O95450 1211 aa14.65□□□□□ -0.06
CHD3-203ENST00000380358 DDX23Q9BUQ8 820 aaKnown RBP14.65□□□□□ -0.06
CHD3-203ENST00000380358 ANKIB1Q9P2G1 1089 aa14.65□□□□□ -0.06
CHD3-203ENST00000380358 CCDC39Q9UFE4 941 aa14.65□□□□□ -0.06
CHD3-203ENST00000380358 PUF60Q9UHX1 559 aaKnown RBP14.65□□□□□ -0.06
CHD3-203ENST00000380358 ZNF396Q96N95 335 aaPredicted RBP14.65□□□□□ -0.06
CHD3-203ENST00000380358 SRRTQ9BXP5 876 aaKnown RBP14.65□□□□□ -0.06
CHD3-203ENST00000380358 RAD54L2Q9Y4B4 1467 aa14.65□□□□□ -0.06
CHD3-203ENST00000380358 POLR3DP05423 398 aaPredicted RBP14.65□□□□□ -0.06
CHD3-203ENST00000380358 DDX11Q96FC9 970 aa14.65□□□□□ -0.06
CHD3-203ENST00000380358 MAP3K9P80192 1104 aa14.64□□□□□ -0.07
CHD3-203ENST00000380358 CCDC178Q5BJE1 867 aa14.64□□□□□ -0.07
CHD3-203ENST00000380358 KLHL10Q6JEL2 608 aa14.64□□□□□ -0.07
CHD3-203ENST00000380358 NACAP1Q9BZK3 213 aa14.64□□□□□ -0.07
CHD3-203ENST00000380358 ZBTB9Q96C00 473 aa14.64□□□□□ -0.07
CHD3-203ENST00000380358 TMOD2Q9NZR1 351 aa14.64□□□□□ -0.07
CHD3-203ENST00000380358 GOLGA6L7A0A1B0GV03 622 aa14.64□□□□□ -0.07
CHD3-203ENST00000380358 GSTTP1A0A1W2PQM5 241 aa14.64□□□□□ -0.07
CHD3-203ENST00000380358 TATP17735 454 aaPredicted RBP14.64□□□□□ -0.07
CHD3-203ENST00000380358 UBAC1Q9BSL1 405 aa14.64□□□□□ -0.07
CHD3-203ENST00000380358 BMP2KQ9NSY1 1161 aaPredicted RBP14.64□□□□□ -0.07
CHD3-203ENST00000380358 CCDC96Q2M329 555 aa14.64□□□□□ -0.07
CHD3-203ENST00000380358 CCDC30Q5VVM6 783 aa14.63□□□□□ -0.07
CHD3-203ENST00000380358 CCDC144AA2RUR9 1427 aa14.63□□□□□ -0.07
CHD3-203ENST00000380358 ZMYND15Q9H091 742 aa14.63□□□□□ -0.07
CHD3-203ENST00000380358 TNMDQ9H2S6 317 aa14.63□□□□□ -0.07
CHD3-203ENST00000380358 PPP4R3AQ6IN85 833 aa14.63□□□□□ -0.07
CHD3-203ENST00000380358 GNAI1P63096 354 aa14.63□□□□□ -0.07
CHD3-203ENST00000380358 CDC45O75419 566 aa14.62□□□□□ -0.07
CHD3-203ENST00000380358 LRRCC1Q9C099 1032 aa14.62□□□□□ -0.07
CHD3-203ENST00000380358 WDHD1O75717 1129 aaPredicted RBP14.62□□□□□ -0.07
CHD3-203ENST00000380358 USP8P40818 1118 aa14.62□□□□□ -0.07
CHD3-203ENST00000380358 CCDC91Q7Z6B0 441 aa14.62□□□□□ -0.07
CHD3-203ENST00000380358 APBB1IPQ7Z5R6 666 aaPredicted RBP14.62□□□□□ -0.07
CHD3-203ENST00000380358 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.62□□□□□ -0.075e-28■□□□□ 10.7
CHD3-203ENST00000380358 CAMK4Q16566 473 aa14.62□□□□□ -0.07
CHD3-203ENST00000380358 LUC7LQ9NQ29 371 aaKnown RBP14.62□□□□□ -0.07
CHD3-203ENST00000380358 JAKMIP3Q5VZ66 844 aa14.61□□□□□ -0.07
CHD3-203ENST00000380358 FERMT2Q96AC1 680 aa14.61□□□□□ -0.07
CHD3-203ENST00000380358 RUNDC1Q96C34 613 aa14.61□□□□□ -0.07
CHD3-203ENST00000380358 CTNNA2P26232 953 aa14.61□□□□□ -0.07
CHD3-203ENST00000380358 MTHFSP49914 203 aa14.61□□□□□ -0.07
CHD3-203ENST00000380358 CWC27Q6UX04 472 aaKnown RBP14.61□□□□□ -0.07
CHD3-203ENST00000380358 CLEC11AQ9Y240 323 aa14.61□□□□□ -0.07
CHD3-203ENST00000380358 CEP57L1Q8IYX8 460 aa14.61□□□□□ -0.07
CHD3-203ENST00000380358 PTCD1O75127 700 aaKnown RBP14.61□□□□□ -0.07
CHD3-203ENST00000380358 PLEKHO1Q53GL0 409 aaPredicted RBP14.61□□□□□ -0.07
CHD3-203ENST00000380358 TAF4BQ92750 862 aa14.61□□□□□ -0.07
CHD3-203ENST00000380358 POTEJP0CG39 1038 aa14.6□□□□□ -0.07
CHD3-203ENST00000380358 ZFP91Q96JP5 570 aaPredicted RBP14.6□□□□□ -0.07
CHD3-203ENST00000380358 VAT1LQ9HCJ6 419 aa14.6□□□□□ -0.07
CHD3-203ENST00000380358 GUCY1B3Q02153 619 aa14.6□□□□□ -0.07
CHD3-203ENST00000380358 FILIP1Q7Z7B0 1213 aa14.6□□□□□ -0.07
CHD3-203ENST00000380358 AACSQ86V21 672 aa14.6□□□□□ -0.07
CHD3-203ENST00000380358 BCAR3O75815 825 aa14.6□□□□□ -0.07
CHD3-203ENST00000380358 STAMBPO95630 424 aa14.6□□□□□ -0.07
CHD3-203ENST00000380358 SLC4A2P04920 1241 aa14.6□□□□□ -0.07
CHD3-203ENST00000380358 ZC3H6P61129 1189 aaKnown RBP14.6□□□□□ -0.07
CHD3-203ENST00000380358 NOL7Q9UMY1 257 aaKnown RBP14.6□□□□□ -0.07
CHD3-203ENST00000380358 GPRASP1Q5JY77 1395 aa14.6□□□□□ -0.07
CHD3-203ENST00000380358 MKNK2Q9HBH9 465 aa14.59□□□□□ -0.07
CHD3-203ENST00000380358 PABPN1LA6NDY0 278 aaKnown RBP14.59□□□□□ -0.07
CHD3-203ENST00000380358 KIF20AO95235 890 aa14.59□□□□□ -0.07
CHD3-203ENST00000380358 INCENPQ9NQS7 918 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms