RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 ATP2B1P20020 1258 aa13.2□□□□□ -0.3
PTCHD1-201ENST00000379361 CNTRLQ7Z7A1 2325 aa13.2□□□□□ -0.3
PTCHD1-201ENST00000379361 UBAC1Q9BSL1 405 aa13.2□□□□□ -0.3
PTCHD1-201ENST00000379361 ZWINTO95229 277 aa13.2□□□□□ -0.3
PTCHD1-201ENST00000379361 STK38Q15208 465 aa13.2□□□□□ -0.3
PTCHD1-201ENST00000379361 KIAA1328Q86T90 577 aa13.2□□□□□ -0.3
PTCHD1-201ENST00000379361 RRBP1Q9P2E9 1410 aaKnown RBP13.2□□□□□ -0.3
PTCHD1-201ENST00000379361 CUL5Q93034 780 aa13.2□□□□□ -0.3
PTCHD1-201ENST00000379361 MRPS9P82933 396 aaKnown RBP13.2□□□□□ -0.3
PTCHD1-201ENST00000379361 ABTB2Q8N961 1025 aa13.2□□□□□ -0.3
PTCHD1-201ENST00000379361 CCDC30Q5VVM6 783 aa13.2□□□□□ -0.3
PTCHD1-201ENST00000379361 HNRNPMP52272 730 aaKnown RBP eCLIP13.2□□□□□ -0.3
PTCHD1-201ENST00000379361 WASF1Q92558 559 aa13.19□□□□□ -0.3
PTCHD1-201ENST00000379361 TTLL12Q14166 644 aaPredicted RBP13.19□□□□□ -0.3
PTCHD1-201ENST00000379361 ZSCAN29Q8IWY8 852 aaPredicted RBP13.19□□□□□ -0.3
PTCHD1-201ENST00000379361 IMMTQ16891 758 aaKnown RBP13.19□□□□□ -0.3
PTCHD1-201ENST00000379361 KDM4AO75164 1064 aa13.19□□□□□ -0.3
PTCHD1-201ENST00000379361 FGFR1OPO95684 399 aaKnown RBP13.18□□□□□ -0.3
PTCHD1-201ENST00000379361 TAF4BQ92750 862 aa13.18□□□□□ -0.3
PTCHD1-201ENST00000379361 EHMT1Q9H9B1 1298 aa13.18□□□□□ -0.3
PTCHD1-201ENST00000379361 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
PTCHD1-201ENST00000379361 DHX57Q6P158 1386 aaKnown RBP13.18□□□□□ -0.3
PTCHD1-201ENST00000379361 RAB3GAP2Q9H2M9 1393 aa13.18□□□□□ -0.3
PTCHD1-201ENST00000379361 MAP2K1Q02750 393 aaPredicted RBP13.18□□□□□ -0.3
PTCHD1-201ENST00000379361 AEBP1Q8IUX7 1158 aa13.18□□□□□ -0.3
PTCHD1-201ENST00000379361 SSBP05455 408 aaKnown RBP eCLIP13.17□□□□□ -0.3
PTCHD1-201ENST00000379361 GCOM1H8Y6P7 765 aaPredicted RBP13.17□□□□□ -0.3
PTCHD1-201ENST00000379361 MYZAPP0CAP1 466 aa13.17□□□□□ -0.3
PTCHD1-201ENST00000379361 DNAJC2Q99543 621 aaKnown RBP13.17□□□□□ -0.3
PTCHD1-201ENST00000379361 LRRFIP2Q9Y608 721 aaKnown RBP13.17□□□□□ -0.3
PTCHD1-201ENST00000379361 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.17□□□□□ -0.3
PTCHD1-201ENST00000379361 SOGA1O94964 1423 aa13.17□□□□□ -0.3
PTCHD1-201ENST00000379361 LRSAM1Q6UWE0 723 aa13.17□□□□□ -0.3
PTCHD1-201ENST00000379361 SREK1Q8WXA9 508 aaKnown RBP13.17□□□□□ -0.3
PTCHD1-201ENST00000379361 ME1P48163 572 aa13.17□□□□□ -0.3
PTCHD1-201ENST00000379361 GSE1Q14687 1217 aa13.17□□□□□ -0.3
PTCHD1-201ENST00000379361 TAF3Q5VWG9 929 aa13.17□□□□□ -0.3
PTCHD1-201ENST00000379361 MAP3K9P80192 1104 aa13.17□□□□□ -0.3
PTCHD1-201ENST00000379361 CAVIN1Q6NZI2 390 aaKnown RBP13.16□□□□□ -0.3
PTCHD1-201ENST00000379361 MAP9Q49MG5 647 aa13.16□□□□□ -0.3
PTCHD1-201ENST00000379361 PIBF1Q8WXW3 757 aa13.16□□□□□ -0.3
PTCHD1-201ENST00000379361 TSPY26PQ9H489 355 aa13.16□□□□□ -0.3
PTCHD1-201ENST00000379361 GSTTP1A0A1W2PQM5 241 aa13.16□□□□□ -0.3
PTCHD1-201ENST00000379361 TSHZ2Q9NRE2 1034 aa13.16□□□□□ -0.3
PTCHD1-201ENST00000379361 GIMAP7Q8NHV1 300 aa13.16□□□□□ -0.3
PTCHD1-201ENST00000379361 FERMT2Q96AC1 680 aa13.16□□□□□ -0.3
PTCHD1-201ENST00000379361 MYCNP04198 464 aaPredicted RBP13.16□□□□□ -0.3
PTCHD1-201ENST00000379361 SLF2Q8IX21 1173 aa13.16□□□□□ -0.3
PTCHD1-201ENST00000379361 CCDC192P0DO97 292 aa13.15□□□□□ -0.3
PTCHD1-201ENST00000379361 FAM193AP78312 1265 aa13.15□□□□□ -0.3
PTCHD1-201ENST00000379361 CEP57L1Q8IYX8 460 aa13.15□□□□□ -0.3
PTCHD1-201ENST00000379361 CCDC148Q8NFR7 591 aa13.15□□□□□ -0.3
PTCHD1-201ENST00000379361 NUP133Q8WUM0 1156 aa13.15□□□□□ -0.3
PTCHD1-201ENST00000379361 VPS8Q8N3P4 1428 aa13.15□□□□□ -0.3
PTCHD1-201ENST00000379361 RUNDC1Q96C34 613 aa13.15□□□□□ -0.3
PTCHD1-201ENST00000379361 CTNNA3Q9UI47 895 aa13.15□□□□□ -0.3
PTCHD1-201ENST00000379361 FAM177BA6PVY3 158 aa13.15□□□□□ -0.3
PTCHD1-201ENST00000379361 IGHMBP2P38935 993 aaKnown RBP13.15□□□□□ -0.31
PTCHD1-201ENST00000379361 RRP1P56182 461 aaKnown RBP13.15□□□□□ -0.31
PTCHD1-201ENST00000379361 WDR70Q9NW82 654 aa13.15□□□□□ -0.31
PTCHD1-201ENST00000379361 TDO2P48775 406 aa13.14□□□□□ -0.31
PTCHD1-201ENST00000379361 CETN1Q12798 172 aa13.14□□□□□ -0.31
PTCHD1-201ENST00000379361 TSNARE1Q96NA8 513 aa13.14□□□□□ -0.31
PTCHD1-201ENST00000379361 CTNNBL1Q8WYA6 563 aaPredicted RBP13.14□□□□□ -0.31
PTCHD1-201ENST00000379361 PSMD1Q99460 953 aa13.14□□□□□ -0.31
PTCHD1-201ENST00000379361 TSG101Q99816 390 aa13.14□□□□□ -0.31
PTCHD1-201ENST00000379361 C22orf23Q9BZE7 217 aa13.14□□□□□ -0.31
PTCHD1-201ENST00000379361 CHMP4BP1P59074 171 aa13.14□□□□□ -0.31
PTCHD1-201ENST00000379361 EIF5P55010 431 aaKnown RBP13.14□□□□□ -0.31
PTCHD1-201ENST00000379361 TAOK3Q9H2K8 898 aa13.13□□□□□ -0.31
PTCHD1-201ENST00000379361 TTC21AQ8NDW8 1320 aa13.13□□□□□ -0.31
PTCHD1-201ENST00000379361 SCAPERQ9BY12 1400 aa13.13□□□□□ -0.31
PTCHD1-201ENST00000379361 MCM3P25205 808 aa13.13□□□□□ -0.31
PTCHD1-201ENST00000379361 KIF4AO95239 1232 aa13.13□□□□□ -0.31
PTCHD1-201ENST00000379361 GNAI3P08754 354 aa13.13□□□□□ -0.31
PTCHD1-201ENST00000379361 SPA17Q15506 151 aa13.13□□□□□ -0.31
PTCHD1-201ENST00000379361 COG6Q9Y2V7 657 aa13.13□□□□□ -0.31
PTCHD1-201ENST00000379361 SURF6O75683 361 aaKnown RBP13.13□□□□□ -0.31
PTCHD1-201ENST00000379361 RGS22Q8NE09 1264 aa13.13□□□□□ -0.31
PTCHD1-201ENST00000379361 ZBED9Q6R2W3 1325 aa13.13□□□□□ -0.31
PTCHD1-201ENST00000379361 TATP17735 454 aaPredicted RBP13.13□□□□□ -0.31
PTCHD1-201ENST00000379361 RAB34Q9BZG1 259 aa13.13□□□□□ -0.31
PTCHD1-201ENST00000379361 USP5P45974 858 aa13.12□□□□□ -0.31
PTCHD1-201ENST00000379361 NOP2P46087 812 aaKnown RBP13.12□□□□□ -0.31
PTCHD1-201ENST00000379361 CRACR2BQ8N4Y2 399 aaPredicted RBP13.12□□□□□ -0.31
PTCHD1-201ENST00000379361 USP47Q96K76 1375 aa13.12□□□□□ -0.31
PTCHD1-201ENST00000379361 ACTN2P35609 894 aa13.12□□□□□ -0.31
PTCHD1-201ENST00000379361 TNMDQ9H2S6 317 aa13.12□□□□□ -0.31
PTCHD1-201ENST00000379361 ZNF710Q8N1W2 664 aa13.12□□□□□ -0.31
PTCHD1-201ENST00000379361 CFAP45Q9UL16 551 aa13.12□□□□□ -0.31
PTCHD1-201ENST00000379361 CABP4P57796 275 aa13.12□□□□□ -0.31
PTCHD1-201ENST00000379361 RAB3IL1Q8TBN0 382 aa13.12□□□□□ -0.31
PTCHD1-201ENST00000379361 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
PTCHD1-201ENST00000379361 ZNF652Q9Y2D9 606 aa13.12□□□□□ -0.31
PTCHD1-201ENST00000379361 MYO18AQ92614 2054 aaKnown RBP13.12□□□□□ -0.31
PTCHD1-201ENST00000379361 CROCCQ5TZA2 2017 aa13.12□□□□□ -0.31
PTCHD1-201ENST00000379361 SPG7Q9UQ90 795 aa13.11□□□□□ -0.31
PTCHD1-201ENST00000379361 FSD2A1L4K1 749 aa13.11□□□□□ -0.31
PTCHD1-201ENST00000379361 SLU7O95391 586 aaKnown RBP13.11□□□□□ -0.31
PTCHD1-201ENST00000379361 BCL11BQ9C0K0 894 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms