RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.52□□□□□ -0.24
RPGR-203ENST00000378505 CCDC173Q0VFZ6 552 aa13.52□□□□□ -0.24
RPGR-203ENST00000378505 VPS53Q5VIR6 699 aa13.52□□□□□ -0.24
RPGR-203ENST00000378505 TSPY26PQ9H489 355 aa13.52□□□□□ -0.24
RPGR-203ENST00000378505 DISP3Q9P2K9 1392 aa13.52□□□□□ -0.25
RPGR-203ENST00000378505 ZNF608Q9ULD9 1512 aaPredicted RBP13.52□□□□□ -0.25
RPGR-203ENST00000378505 SKAP1Q86WV1 359 aa13.51□□□□□ -0.25
RPGR-203ENST00000378505 C14orf93Q9H972 538 aaKnown RBP13.51□□□□□ -0.25
RPGR-203ENST00000378505 TBC1D2BQ9UPU7 963 aa13.51□□□□□ -0.25
RPGR-203ENST00000378505 UGGT2Q9NYU1 1516 aa13.51□□□□□ -0.25
RPGR-203ENST00000378505 ANKRD1Q15327 319 aa13.51□□□□□ -0.25
RPGR-203ENST00000378505 KINO60870 393 aaKnown RBP13.5□□□□□ -0.25
RPGR-203ENST00000378505 NSD2O96028 1365 aa13.5□□□□□ -0.25
RPGR-203ENST00000378505 DHX16O60231 1041 aaKnown RBP13.5□□□□□ -0.25
RPGR-203ENST00000378505 AEBP1Q8IUX7 1158 aa13.5□□□□□ -0.25
RPGR-203ENST00000378505 A0A0U1RQG5 324 aaPredicted RBP13.5□□□□□ -0.25
RPGR-203ENST00000378505 FBXW7Q969H0 707 aa13.5□□□□□ -0.25
RPGR-203ENST00000378505 GNAT3A8MTJ3 354 aa13.49□□□□□ -0.25
RPGR-203ENST00000378505 GRPEL1Q9HAV7 217 aa13.49□□□□□ -0.25
RPGR-203ENST00000378505 IL1RAPL2Q9NP60 686 aa13.49□□□□□ -0.25
RPGR-203ENST00000378505 GPS2Q13227 327 aa13.49□□□□□ -0.25
RPGR-203ENST00000378505 ANKLE2Q86XL3 938 aa13.49□□□□□ -0.25
RPGR-203ENST00000378505 TRIM5Q9C035 493 aa13.49□□□□□ -0.25
RPGR-203ENST00000378505 R3HCC1Q9Y3T6 440 aaKnown RBP13.49□□□□□ -0.25
RPGR-203ENST00000378505 CEP89Q96ST8 783 aa13.49□□□□□ -0.25
RPGR-203ENST00000378505 EXOC6BQ9Y2D4 811 aa13.49□□□□□ -0.25
RPGR-203ENST00000378505 SART3Q15020 963 aaKnown RBP13.48□□□□□ -0.25
RPGR-203ENST00000378505 NME9Q86XW9 330 aa13.48□□□□□ -0.25
RPGR-203ENST00000378505 TRIM27P14373 513 aa13.48□□□□□ -0.25
RPGR-203ENST00000378505 TNNT3P45378 269 aaPredicted RBP13.48□□□□□ -0.25
RPGR-203ENST00000378505 MCM10Q7L590 875 aa13.48□□□□□ -0.25
RPGR-203ENST00000378505 DHX29Q7Z478 1369 aaKnown RBP13.48□□□□□ -0.25
RPGR-203ENST00000378505 IL27Q8NEV9 243 aa13.48□□□□□ -0.25
RPGR-203ENST00000378505 SPG7Q9UQ90 795 aa13.48□□□□□ -0.25
RPGR-203ENST00000378505 FAM135AQ9P2D6 1515 aa13.48□□□□□ -0.25
RPGR-203ENST00000378505 XBP1P17861 261 aa13.48□□□□□ -0.25
RPGR-203ENST00000378505 DCTN1Q14203 1278 aa13.48□□□□□ -0.25
RPGR-203ENST00000378505 RALGAPBQ86X10 1494 aa13.48□□□□□ -0.25
RPGR-203ENST00000378505 VSIG10Q8N0Z9 540 aa13.48□□□□□ -0.25
RPGR-203ENST00000378505 SIL1Q9H173 461 aa13.48□□□□□ -0.25
RPGR-203ENST00000378505 NOS1P29475 1434 aa13.47□□□□□ -0.25
RPGR-203ENST00000378505 CCDC158Q5M9N0 1113 aa13.47□□□□□ -0.25
RPGR-203ENST00000378505 CCDC70Q6NSX1 233 aa13.47□□□□□ -0.25
RPGR-203ENST00000378505 EMILIN1Q9Y6C2 1016 aa13.47□□□□□ -0.25
RPGR-203ENST00000378505 CABP4P57796 275 aa13.47□□□□□ -0.25
RPGR-203ENST00000378505 BLOC1S2Q6QNY1 142 aa13.47□□□□□ -0.25
RPGR-203ENST00000378505 BTBD11A6QL63 1104 aa13.47□□□□□ -0.25
RPGR-203ENST00000378505 KRT85P78386 507 aa13.47□□□□□ -0.25
RPGR-203ENST00000378505 AMER1Q5JTC6 1135 aaPredicted RBP13.47□□□□□ -0.25
RPGR-203ENST00000378505 OLFM4Q6UX06 510 aa13.47□□□□□ -0.25
RPGR-203ENST00000378505 KIF6Q6ZMV9 814 aa13.47□□□□□ -0.25
RPGR-203ENST00000378505 AACSQ86V21 672 aa13.47□□□□□ -0.25
RPGR-203ENST00000378505 PCMTD1Q96MG8 357 aaPredicted RBP13.47□□□□□ -0.25
RPGR-203ENST00000378505 ZNF396Q96N95 335 aaPredicted RBP13.47□□□□□ -0.25
RPGR-203ENST00000378505 WASLO00401 505 aaPredicted RBP13.46□□□□□ -0.25
RPGR-203ENST00000378505 ZSCAN31Q96LW9 406 aaPredicted RBP13.46□□□□□ -0.25
RPGR-203ENST00000378505 MIS18AQ9NYP9 233 aa13.46□□□□□ -0.25
RPGR-203ENST00000378505 LARP1BQ659C4 914 aaKnown RBP13.46□□□□□ -0.26
RPGR-203ENST00000378505 KIF1BPQ96EK5 621 aa13.46□□□□□ -0.26
RPGR-203ENST00000378505 BRMS1Q9HCU9 246 aa13.46□□□□□ -0.26
RPGR-203ENST00000378505 MAP4K4O95819 1239 aaPredicted RBP13.45□□□□□ -0.26
RPGR-203ENST00000378505 POGZQ7Z3K3 1410 aa13.45□□□□□ -0.26
RPGR-203ENST00000378505 PDIA4P13667 645 aaKnown RBP13.45□□□□□ -0.26
RPGR-203ENST00000378505 KCNH5Q8NCM2 988 aa13.45□□□□□ -0.26
RPGR-203ENST00000378505 CCDC192P0DO97 292 aa13.45□□□□□ -0.26
RPGR-203ENST00000378505 STK38Q15208 465 aa13.45□□□□□ -0.26
RPGR-203ENST00000378505 MTERF4Q7Z6M4 381 aaKnown RBP13.45□□□□□ -0.26
RPGR-203ENST00000378505 MAP7D2Q96T17 732 aa13.45□□□□□ -0.26
RPGR-203ENST00000378505 IL16Q14005 1332 aa13.45□□□□□ -0.26
RPGR-203ENST00000378505 MX1P20591 662 aa13.44□□□□□ -0.26
RPGR-203ENST00000378505 CWC27Q6UX04 472 aaKnown RBP13.44□□□□□ -0.26
RPGR-203ENST00000378505 RBM33Q96EV2 1170 aaKnown RBP13.44□□□□□ -0.26
RPGR-203ENST00000378505 RBM42Q9BTD8 480 aaKnown RBP13.44□□□□□ -0.26
RPGR-203ENST00000378505 MYL6BP14649 208 aa13.44□□□□□ -0.26
RPGR-203ENST00000378505 FANCAO15360 1455 aa13.44□□□□□ -0.26
RPGR-203ENST00000378505 TRIM34Q9BYJ4 488 aa13.44□□□□□ -0.26
RPGR-203ENST00000378505 ATP10BO94823 1461 aa13.44□□□□□ -0.26
RPGR-203ENST00000378505 GLRX3O76003 335 aaKnown RBP13.44□□□□□ -0.26
RPGR-203ENST00000378505 HMGN5P82970 282 aaKnown RBP13.44□□□□□ -0.26
RPGR-203ENST00000378505 TAF7Q15545 349 aaPredicted RBP13.44□□□□□ -0.26
RPGR-203ENST00000378505 FBXO31Q5XUX0 539 aaPredicted RBP13.44□□□□□ -0.26
RPGR-203ENST00000378505 MNS1Q8NEH6 495 aa13.44□□□□□ -0.26
RPGR-203ENST00000378505 JAKMIP1Q96N16 626 aaKnown RBP13.44□□□□□ -0.26
RPGR-203ENST00000378505 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.44□□□□□ -0.26
RPGR-203ENST00000378505 RAD21O60216 631 aa13.43□□□□□ -0.26
RPGR-203ENST00000378505 RAB11FIP3O75154 756 aa13.43□□□□□ -0.26
RPGR-203ENST00000378505 KRT32Q14532 448 aa13.43□□□□□ -0.26
RPGR-203ENST00000378505 TBC1D2Q9BYX2 928 aa13.43□□□□□ -0.26
RPGR-203ENST00000378505 CNNM1Q9NRU3 951 aa13.43□□□□□ -0.26
RPGR-203ENST00000378505 PDRG1Q9NUG6 133 aa13.43□□□□□ -0.26
RPGR-203ENST00000378505 PARD3Q8TEW0 1356 aa13.43□□□□□ -0.26
RPGR-203ENST00000378505 NUP160Q12769 1436 aa13.43□□□□□ -0.26
RPGR-203ENST00000378505 TTC39AQ5SRH9 613 aa13.43□□□□□ -0.26
RPGR-203ENST00000378505 JMYQ8N9B5 988 aa13.43□□□□□ -0.26
RPGR-203ENST00000378505 NUP153P49790 1475 aaKnown RBP13.43□□□□□ -0.26
RPGR-203ENST00000378505 TOM1L2Q6ZVM7 507 aa13.43□□□□□ -0.26
RPGR-203ENST00000378505 CEP126Q9P2H0 1117 aa13.43□□□□□ -0.26
RPGR-203ENST00000378505 STK3Q13188 491 aa13.42□□□□□ -0.26
RPGR-203ENST00000378505 STRN4Q9NRL3 753 aa13.42□□□□□ -0.26
RPGR-203ENST00000378505 PRAG1Q86YV5 1406 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms