RNA–Protein interactions for RNA: ENST00000377885.6

RNF38-206, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-206ENST00000377885 TRIM35Q9UPQ4 493 aa12.2□□□□□ -0.46
RNF38-206ENST00000377885 CLTCL1P53675 1640 aa12.2□□□□□ -0.46
RNF38-206ENST00000377885 NFE2L2Q16236 605 aa12.2□□□□□ -0.46
RNF38-206ENST00000377885 SHROOM2Q13796 1616 aa12.2□□□□□ -0.46
RNF38-206ENST00000377885 IBTKQ9P2D0 1353 aaPredicted RBP12.19□□□□□ -0.46
RNF38-206ENST00000377885 ERC2O15083 957 aa12.19□□□□□ -0.46
RNF38-206ENST00000377885 SASS6Q6UVJ0 657 aa12.19□□□□□ -0.46
RNF38-206ENST00000377885 SYCE3A1L190 88 aa12.19□□□□□ -0.46
RNF38-206ENST00000377885 NOL8Q76FK4 1167 aaKnown RBP12.19□□□□□ -0.46
RNF38-206ENST00000377885 IFT57Q9NWB7 429 aa12.19□□□□□ -0.46
RNF38-206ENST00000377885 NOL7Q9UMY1 257 aaKnown RBP12.19□□□□□ -0.46
RNF38-206ENST00000377885 DYNC1I1O14576 645 aa12.18□□□□□ -0.46
RNF38-206ENST00000377885 NEK4P51957 841 aa12.18□□□□□ -0.46
RNF38-206ENST00000377885 TTC22Q5TAA0 569 aa12.18□□□□□ -0.46
RNF38-206ENST00000377885 IQSEC2Q5JU85 1478 aa12.18□□□□□ -0.46
RNF38-206ENST00000377885 TRIM6-TRIM34B2RNG4 842 aa12.18□□□□□ -0.46
RNF38-206ENST00000377885 ZBTB7BO15156 539 aaPredicted RBP12.18□□□□□ -0.46
RNF38-206ENST00000377885 HMGN5P82970 282 aaKnown RBP12.18□□□□□ -0.46
RNF38-206ENST00000377885 RPAP2Q8IXW5 612 aaPredicted RBP12.18□□□□□ -0.46
RNF38-206ENST00000377885 ZKSCAN5Q9Y2L8 839 aa12.18□□□□□ -0.46
RNF38-206ENST00000377885 LRSAM1Q6UWE0 723 aa12.17□□□□□ -0.46
RNF38-206ENST00000377885 MAP3K4Q9Y6R4 1608 aa12.17□□□□□ -0.46
RNF38-206ENST00000377885 MRPL50Q8N5N7 158 aaKnown RBP12.17□□□□□ -0.46
RNF38-206ENST00000377885 NCOA3Q9Y6Q9 1424 aa12.17□□□□□ -0.46
RNF38-206ENST00000377885 TET3O43151 1660 aa12.17□□□□□ -0.46
RNF38-206ENST00000377885 CEP152O94986 1710 aa12.17□□□□□ -0.46
RNF38-206ENST00000377885 ABCC1P33527 1531 aa12.17□□□□□ -0.46
RNF38-206ENST00000377885 PRIM1P49642 420 aaKnown RBP12.16□□□□□ -0.46
RNF38-206ENST00000377885 KIAA1210Q9ULL0 1709 aa12.16□□□□□ -0.46
RNF38-206ENST00000377885 GOLGA6L6A8MZA4 724 aa12.16□□□□□ -0.46
RNF38-206ENST00000377885 DDIT3P35638 169 aa12.16□□□□□ -0.46
RNF38-206ENST00000377885 FANCAO15360 1455 aa12.15□□□□□ -0.46
RNF38-206ENST00000377885 SLC4A10Q6U841 1118 aa12.15□□□□□ -0.46
RNF38-206ENST00000377885 PLEKHF1Q96S99 279 aa12.15□□□□□ -0.46
RNF38-206ENST00000377885 RBM27Q9P2N5 1060 aaKnown RBP12.15□□□□□ -0.46
RNF38-206ENST00000377885 RBSNQ9H1K0 784 aa12.15□□□□□ -0.46
RNF38-206ENST00000377885 ATP6V1DQ9Y5K8 247 aa12.15□□□□□ -0.46
RNF38-206ENST00000377885 FOXD4L6Q3SYB3 417 aaPredicted RBP12.15□□□□□ -0.46
RNF38-206ENST00000377885 FOXD4L3Q6VB84 417 aaPredicted RBP12.15□□□□□ -0.46
RNF38-206ENST00000377885 MYOM1P52179 1685 aa12.15□□□□□ -0.47
RNF38-206ENST00000377885 FAM184AQ8NB25 1140 aa12.15□□□□□ -0.47
RNF38-206ENST00000377885 THUMPD2Q9BTF0 503 aaKnown RBP12.15□□□□□ -0.47
RNF38-206ENST00000377885 UHRF1BP1LA0JNW5 1464 aa12.14□□□□□ -0.47
RNF38-206ENST00000377885 LETM1O95202 739 aaPredicted RBP12.14□□□□□ -0.47
RNF38-206ENST00000377885 CD2BP2O95400 341 aaKnown RBP12.14□□□□□ -0.47
RNF38-206ENST00000377885 RILPL2Q969X0 211 aa12.14□□□□□ -0.47
RNF38-206ENST00000377885 PRAM1Q96QH2 718 aa12.14□□□□□ -0.47
RNF38-206ENST00000377885 ANO2Q9NQ90 1003 aa12.14□□□□□ -0.47
RNF38-206ENST00000377885 LMBRD1Q9NUN5 540 aa12.14□□□□□ -0.47
RNF38-206ENST00000377885 ATP7AQ04656 1500 aa12.14□□□□□ -0.47
RNF38-206ENST00000377885 FYB1O15117 783 aa12.14□□□□□ -0.47
RNF38-206ENST00000377885 ZNF500O60304 480 aaPredicted RBP12.14□□□□□ -0.47
RNF38-206ENST00000377885 VAMP4O75379 141 aa12.14□□□□□ -0.47
RNF38-206ENST00000377885 PLEKHM2Q8IWE5 1019 aa12.14□□□□□ -0.47
RNF38-206ENST00000377885 USP26Q9BXU7 913 aa12.14□□□□□ -0.47
RNF38-206ENST00000377885 ASXL2Q76L83 1435 aa12.14□□□□□ -0.47
RNF38-206ENST00000377885 RIMBP3CA6NJZ7 1639 aa12.14□□□□□ -0.47
RNF38-206ENST00000377885 RIMBP3BA6NNM3 1639 aa12.14□□□□□ -0.47
RNF38-206ENST00000377885 RIMBP3Q9UFD9 1639 aa12.14□□□□□ -0.47
RNF38-206ENST00000377885 CLEC17AQ6ZS10 378 aa12.13□□□□□ -0.47
RNF38-206ENST00000377885 RTF1Q92541 710 aaKnown RBP12.13□□□□□ -0.47
RNF38-206ENST00000377885 KIF1BO60333 1816 aa12.13□□□□□ -0.47
RNF38-206ENST00000377885 COG3Q96JB2 828 aa12.13□□□□□ -0.47
RNF38-206ENST00000377885 A0A1W2PP64 1363 aa12.13□□□□□ -0.47
RNF38-206ENST00000377885 ABCA6Q8N139 1617 aa12.13□□□□□ -0.47
RNF38-206ENST00000377885 STK31Q9BXU1 1019 aa12.13□□□□□ -0.47
RNF38-206ENST00000377885 DCTPP1Q9H773 170 aa12.13□□□□□ -0.47
RNF38-206ENST00000377885 CABP1Q9NZU7 370 aa12.12□□□□□ -0.47
RNF38-206ENST00000377885 MBIPQ9NS73 344 aa12.12□□□□□ -0.47
RNF38-206ENST00000377885 BRPF1P55201 1214 aaPredicted RBP12.12□□□□□ -0.47
RNF38-206ENST00000377885 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.12□□□□□ -0.47
RNF38-206ENST00000377885 CDK19Q9BWU1 502 aa12.12□□□□□ -0.47
RNF38-206ENST00000377885 PPIP5K1Q6PFW1 1433 aa12.12□□□□□ -0.47
RNF38-206ENST00000377885 WDR33Q9C0J8 1336 aaKnown RBP12.12□□□□□ -0.47
RNF38-206ENST00000377885 SDSP20132 328 aa12.11□□□□□ -0.47
RNF38-206ENST00000377885 DIAPH3Q9NSV4 1193 aa12.11□□□□□ -0.47
RNF38-206ENST00000377885 UGGT1Q9NYU2 1555 aa12.11□□□□□ -0.47
RNF38-206ENST00000377885 TPM3P06753 285 aa12.11□□□□□ -0.47
RNF38-206ENST00000377885 DRC7Q8IY82 874 aa12.11□□□□□ -0.47
RNF38-206ENST00000377885 ZFYVE9O95405 1425 aa12.11□□□□□ -0.47
RNF38-206ENST00000377885 GOLGA6L4A6NEF3 574 aa12.1□□□□□ -0.47
RNF38-206ENST00000377885 ZFYVE16Q7Z3T8 1539 aa12.1□□□□□ -0.47
RNF38-206ENST00000377885 ZGPATQ8N5A5 531 aaKnown RBP12.1□□□□□ -0.47
RNF38-206ENST00000377885 KIF2CQ99661 725 aa12.1□□□□□ -0.47
RNF38-206ENST00000377885 ANKRD44Q8N8A2 993 aa12.1□□□□□ -0.47
RNF38-206ENST00000377885 SMARCA5O60264 1052 aaPredicted RBP12.1□□□□□ -0.47
RNF38-206ENST00000377885 TSPYL6Q8N831 410 aa12.09□□□□□ -0.47
RNF38-206ENST00000377885 UVSSAQ2YD98 709 aa12.09□□□□□ -0.47
RNF38-206ENST00000377885 PRIMPOLQ96LW4 560 aa12.09□□□□□ -0.47
RNF38-206ENST00000377885 ABCC4O15439 1325 aa12.09□□□□□ -0.47
RNF38-206ENST00000377885 GSPT1P15170 499 aaKnown RBP12.08□□□□□ -0.48
RNF38-206ENST00000377885 TMX3Q96JJ7 454 aa12.08□□□□□ -0.48
RNF38-206ENST00000377885 SLC52A1Q9NWF4 448 aa12.08□□□□□ -0.48
RNF38-206ENST00000377885 SETBP1Q9Y6X0 1596 aa12.08□□□□□ -0.48
RNF38-206ENST00000377885 C16orf71Q8IYS4 520 aaPredicted RBP12.08□□□□□ -0.48
RNF38-206ENST00000377885 CD109Q6YHK3 1445 aa12.08□□□□□ -0.48
RNF38-206ENST00000377885 KIF3AQ9Y496 699 aa12.07□□□□□ -0.48
RNF38-206ENST00000377885 KIF24Q5T7B8 1368 aa12.07□□□□□ -0.48
RNF38-206ENST00000377885 CCT4P50991 539 aaKnown RBP12.07□□□□□ -0.48
RNF38-206ENST00000377885 SMAP1Q8IYB5 467 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms