RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 LRRCC1Q9C099 1032 aa10.79□□□□□ -0.68
CRNKL1-201ENST00000377327 TNNQ9UQP3 1299 aa10.79□□□□□ -0.68
CRNKL1-201ENST00000377327 APPP05067 770 aa10.79□□□□□ -0.68
CRNKL1-201ENST00000377327 PTPRGP23470 1445 aa10.79□□□□□ -0.68
CRNKL1-201ENST00000377327 CREBRFQ8IUR6 639 aa10.79□□□□□ -0.68
CRNKL1-201ENST00000377327 UBXN4Q92575 508 aa10.79□□□□□ -0.68
CRNKL1-201ENST00000377327 CYP46A1Q9Y6A2 500 aa10.79□□□□□ -0.68
CRNKL1-201ENST00000377327 INSRP06213 1382 aa10.79□□□□□ -0.68
CRNKL1-201ENST00000377327 SURF6O75683 361 aaKnown RBP10.78□□□□□ -0.68
CRNKL1-201ENST00000377327 HDGFP51858 240 aaKnown RBP10.78□□□□□ -0.68
CRNKL1-201ENST00000377327 NECTIN2Q92692 538 aa10.78□□□□□ -0.68
CRNKL1-201ENST00000377327 FMNL2Q96PY5 1086 aa10.78□□□□□ -0.68
CRNKL1-201ENST00000377327 SPATA31E1Q6ZUB1 1445 aa10.78□□□□□ -0.68
CRNKL1-201ENST00000377327 UBTFL1P0CB47 393 aaPredicted RBP10.78□□□□□ -0.68
CRNKL1-201ENST00000377327 ANTXR1Q9H6X2 564 aa10.78□□□□□ -0.68
CRNKL1-201ENST00000377327 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.78□□□□□ -0.68
CRNKL1-201ENST00000377327 PDIA4P13667 645 aaKnown RBP10.78□□□□□ -0.68
CRNKL1-201ENST00000377327 TMCO3Q6UWJ1 677 aa10.78□□□□□ -0.68
CRNKL1-201ENST00000377327 GAS2L3Q86XJ1 694 aa10.78□□□□□ -0.68
CRNKL1-201ENST00000377327 TSPYL4Q9UJ04 414 aa10.78□□□□□ -0.68
CRNKL1-201ENST00000377327 NSD3Q9BZ95 1437 aa10.78□□□□□ -0.68
CRNKL1-201ENST00000377327 IGSF3O75054 1194 aa10.77□□□□□ -0.68
CRNKL1-201ENST00000377327 CCDC70Q6NSX1 233 aa10.77□□□□□ -0.68
CRNKL1-201ENST00000377327 KRT222Q8N1A0 295 aa10.77□□□□□ -0.68
CRNKL1-201ENST00000377327 SRCIN1Q9C0H9 1055 aa10.77□□□□□ -0.68
CRNKL1-201ENST00000377327 PAXBP1Q9Y5B6 917 aa10.77□□□□□ -0.68
CRNKL1-201ENST00000377327 ABCC11Q96J66 1382 aa10.77□□□□□ -0.69
CRNKL1-201ENST00000377327 MYRIPQ8NFW9 859 aa10.77□□□□□ -0.69
CRNKL1-201ENST00000377327 SPATA32Q96LK8 384 aa10.77□□□□□ -0.69
CRNKL1-201ENST00000377327 TRERF1Q96PN7 1200 aa10.77□□□□□ -0.69
CRNKL1-201ENST00000377327 FEZ1Q99689 392 aa10.77□□□□□ -0.69
CRNKL1-201ENST00000377327 ZNF500O60304 480 aaPredicted RBP10.77□□□□□ -0.69
CRNKL1-201ENST00000377327 FCHSD2O94868 740 aa10.77□□□□□ -0.69
CRNKL1-201ENST00000377327 AMPHP49418 695 aa10.77□□□□□ -0.69
CRNKL1-201ENST00000377327 TSR1Q2NL82 804 aaKnown RBP10.77□□□□□ -0.69
CRNKL1-201ENST00000377327 ZSCAN31Q96LW9 406 aaPredicted RBP10.77□□□□□ -0.69
CRNKL1-201ENST00000377327 TESK2Q96S53 571 aa10.77□□□□□ -0.69
CRNKL1-201ENST00000377327 C9orf78Q9NZ63 289 aaPredicted RBP10.77□□□□□ -0.69
CRNKL1-201ENST00000377327 SLC4A2P04920 1241 aa10.76□□□□□ -0.69
CRNKL1-201ENST00000377327 TRHP20396 242 aaPredicted RBP10.76□□□□□ -0.69
CRNKL1-201ENST00000377327 CAMK4Q16566 473 aa10.76□□□□□ -0.69
CRNKL1-201ENST00000377327 TMX3Q96JJ7 454 aa10.76□□□□□ -0.69
CRNKL1-201ENST00000377327 UBE2HP62256 183 aa10.76□□□□□ -0.69
CRNKL1-201ENST00000377327 CLASRPQ8N2M8 674 aaKnown RBP10.76□□□□□ -0.69
CRNKL1-201ENST00000377327 FOSBP53539 338 aa10.76□□□□□ -0.69
CRNKL1-201ENST00000377327 SMARCA5O60264 1052 aaPredicted RBP10.75□□□□□ -0.69
CRNKL1-201ENST00000377327 CCT4P50991 539 aaKnown RBP10.75□□□□□ -0.69
CRNKL1-201ENST00000377327 SYNE3Q6ZMZ3 975 aa10.75□□□□□ -0.69
CRNKL1-201ENST00000377327 ERCC4Q92889 916 aaPredicted RBP10.75□□□□□ -0.69
CRNKL1-201ENST00000377327 TTC22Q5TAA0 569 aa10.75□□□□□ -0.69
CRNKL1-201ENST00000377327 PDILTQ8N807 584 aa10.75□□□□□ -0.69
CRNKL1-201ENST00000377327 CLIP2Q9UDT6 1046 aa10.75□□□□□ -0.69
CRNKL1-201ENST00000377327 ZMYM4Q5VZL5 1548 aa10.75□□□□□ -0.69
CRNKL1-201ENST00000377327 CEBPZQ03701 1054 aaKnown RBP10.75□□□□□ -0.69
CRNKL1-201ENST00000377327 CAMSAP2Q08AD1 1489 aa10.75□□□□□ -0.69
CRNKL1-201ENST00000377327 CPLX1O14810 134 aa10.75□□□□□ -0.69
CRNKL1-201ENST00000377327 NEMFO60524 1076 aa10.75□□□□□ -0.69
CRNKL1-201ENST00000377327 BMS1Q14692 1282 aaKnown RBP10.75□□□□□ -0.69
CRNKL1-201ENST00000377327 OGFRQ9NZT2 677 aa10.75□□□□□ -0.69
CRNKL1-201ENST00000377327 HOOK1Q9UJC3 728 aaKnown RBP10.75□□□□□ -0.69
CRNKL1-201ENST00000377327 UGGT2Q9NYU1 1516 aa10.74□□□□□ -0.69
CRNKL1-201ENST00000377327 EIF2S2P20042 333 aaKnown RBP10.74□□□□□ -0.69
CRNKL1-201ENST00000377327 G3BP1Q13283 466 aaKnown RBP eCLIP10.74□□□□□ -0.693e-6■■■■□ 22.7
CRNKL1-201ENST00000377327 CPLX2Q6PUV4 134 aaKnown RBP10.74□□□□□ -0.69
CRNKL1-201ENST00000377327 CEP57L1Q8IYX8 460 aa10.74□□□□□ -0.69
CRNKL1-201ENST00000377327 PDRG1Q9NUG6 133 aa10.74□□□□□ -0.69
CRNKL1-201ENST00000377327 PPP6R1Q9UPN7 881 aa10.74□□□□□ -0.69
CRNKL1-201ENST00000377327 MX1P20591 662 aa10.74□□□□□ -0.69
CRNKL1-201ENST00000377327 GTF2F1P35269 517 aaKnown RBP eCLIP10.74□□□□□ -0.69
CRNKL1-201ENST00000377327 ANKRD1Q15327 319 aa10.74□□□□□ -0.69
CRNKL1-201ENST00000377327 DNAJC2Q99543 621 aaKnown RBP10.74□□□□□ -0.69
CRNKL1-201ENST00000377327 NOL10Q9BSC4 688 aaKnown RBP10.74□□□□□ -0.69
CRNKL1-201ENST00000377327 ABCA10Q8WWZ4 1543 aa10.74□□□□□ -0.69
CRNKL1-201ENST00000377327 BLMP54132 1417 aaPredicted RBP10.74□□□□□ -0.69
CRNKL1-201ENST00000377327 TEX14Q8IWB6 1497 aa10.74□□□□□ -0.69
CRNKL1-201ENST00000377327 FAM177BA6PVY3 158 aa10.74□□□□□ -0.69
CRNKL1-201ENST00000377327 FERMT3Q86UX7 667 aa10.74□□□□□ -0.69
CRNKL1-201ENST00000377327 NFE2L2Q16236 605 aa10.73□□□□□ -0.69
CRNKL1-201ENST00000377327 GIMAP6Q6P9H5 292 aa10.73□□□□□ -0.69
CRNKL1-201ENST00000377327 OLFM4Q6UX06 510 aa10.73□□□□□ -0.69
CRNKL1-201ENST00000377327 SCAND2PQ9GZW5 306 aaPredicted RBP10.73□□□□□ -0.69
CRNKL1-201ENST00000377327 DEF6Q9H4E7 631 aa10.73□□□□□ -0.69
CRNKL1-201ENST00000377327 PES1O00541 588 aaKnown RBP10.73□□□□□ -0.69
CRNKL1-201ENST00000377327 USP48Q86UV5 1035 aa10.73□□□□□ -0.69
CRNKL1-201ENST00000377327 ZGPATQ8N5A5 531 aaKnown RBP10.73□□□□□ -0.69
CRNKL1-201ENST00000377327 PIBF1Q8WXW3 757 aa10.73□□□□□ -0.69
CRNKL1-201ENST00000377327 EXOC6BQ9Y2D4 811 aa10.73□□□□□ -0.69
CRNKL1-201ENST00000377327 TOPBP1Q92547 1522 aa10.73□□□□□ -0.69
CRNKL1-201ENST00000377327 CEP135Q66GS9 1140 aa10.73□□□□□ -0.69
CRNKL1-201ENST00000377327 LMOD2Q6P5Q4 547 aa10.73□□□□□ -0.69
CRNKL1-201ENST00000377327 JAKMIP1Q96N16 626 aaKnown RBP10.73□□□□□ -0.69
CRNKL1-201ENST00000377327 ZNF396Q96N95 335 aaPredicted RBP10.73□□□□□ -0.69
CRNKL1-201ENST00000377327 ZBTB40Q9NUA8 1239 aa10.73□□□□□ -0.69
CRNKL1-201ENST00000377327 CFAP45Q9UL16 551 aa10.73□□□□□ -0.69
CRNKL1-201ENST00000377327 H0YHG0 523 aa10.72□□□□□ -0.69
CRNKL1-201ENST00000377327 STX6O43752 255 aa10.72□□□□□ -0.69
CRNKL1-201ENST00000377327 IPO7O95373 1038 aaKnown RBP10.72□□□□□ -0.69
CRNKL1-201ENST00000377327 CKAP2LQ8IYA6 745 aa10.72□□□□□ -0.69
CRNKL1-201ENST00000377327 LIMCH1Q9UPQ0 1083 aa10.72□□□□□ -0.69
CRNKL1-201ENST00000377327 POLR3GO15318 223 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms