RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 CCDC61Q9Y6R9 512 aa20.42■□□□□ 0.86
TRIM27-202ENST00000377199 CLTCQ00610 1675 aaKnown RBP20.42■□□□□ 0.86
TRIM27-202ENST00000377199 APBB1O00213 710 aa20.41■□□□□ 0.86
TRIM27-202ENST00000377199 ZBTB7BO15156 539 aaPredicted RBP20.41■□□□□ 0.86
TRIM27-202ENST00000377199 FOXD4L1Q9NU39 408 aa20.41■□□□□ 0.86
TRIM27-202ENST00000377199 SULT6B1Q6IMI4 303 aa20.4■□□□□ 0.86
TRIM27-202ENST00000377199 MAP2P11137 1827 aaKnown RBP20.39■□□□□ 0.86
TRIM27-202ENST00000377199 MCM10Q7L590 875 aa20.39■□□□□ 0.85
TRIM27-202ENST00000377199 CALD1Q05682 793 aaKnown RBP20.39■□□□□ 0.85
TRIM27-202ENST00000377199 IFT57Q9NWB7 429 aa20.39■□□□□ 0.85
TRIM27-202ENST00000377199 KIF20BQ96Q89 1820 aa20.38■□□□□ 0.85
TRIM27-202ENST00000377199 HSCBQ8IWL3 235 aa20.38■□□□□ 0.85
TRIM27-202ENST00000377199 ANKRD26Q9UPS8 1709 aa20.38■□□□□ 0.85
TRIM27-202ENST00000377199 MIS18AQ9NYP9 233 aa20.37■□□□□ 0.85
TRIM27-202ENST00000377199 EDC4Q6P2E9 1401 aaKnown RBP20.37■□□□□ 0.85
TRIM27-202ENST00000377199 PRR36Q9H6K5 1346 aa20.36■□□□□ 0.85
TRIM27-202ENST00000377199 ATP7BP35670 1465 aa20.36■□□□□ 0.85
TRIM27-202ENST00000377199 SIRT2Q8IXJ6 389 aa20.36■□□□□ 0.85
TRIM27-202ENST00000377199 SLC26A8Q96RN1 970 aa20.36■□□□□ 0.85
TRIM27-202ENST00000377199 CFAP44Q96MT7 982 aa20.36■□□□□ 0.85
TRIM27-202ENST00000377199 CPS1P31327 1500 aa20.35■□□□□ 0.85
TRIM27-202ENST00000377199 ZMYM3Q14202 1370 aa20.34■□□□□ 0.85
TRIM27-202ENST00000377199 HSP90AB2PQ58FF8 381 aa20.34■□□□□ 0.85
TRIM27-202ENST00000377199 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.34■□□□□ 0.85
TRIM27-202ENST00000377199 EIF4A2Q14240 407 aaKnown RBP20.34■□□□□ 0.85
TRIM27-202ENST00000377199 CPSF1Q10570 1443 aaKnown RBP20.33■□□□□ 0.85
TRIM27-202ENST00000377199 HSP90AA1P07900 732 aaKnown RBP20.33■□□□□ 0.84
TRIM27-202ENST00000377199 CEBPAP49715 358 aaPredicted RBP20.32■□□□□ 0.84
TRIM27-202ENST00000377199 LMOD3Q0VAK6 560 aa20.32■□□□□ 0.84
TRIM27-202ENST00000377199 ZNF853P0CG23 659 aa20.31■□□□□ 0.84
TRIM27-202ENST00000377199 RBM42Q9BTD8 480 aaKnown RBP20.31■□□□□ 0.84
TRIM27-202ENST00000377199 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.31■□□□□ 0.84
TRIM27-202ENST00000377199 ACEP12821 1306 aa20.31■□□□□ 0.84
TRIM27-202ENST00000377199 HSP90AB1P08238 724 aaKnown RBP20.31■□□□□ 0.84
TRIM27-202ENST00000377199 ZNF428Q96B54 188 aa20.31■□□□□ 0.84
TRIM27-202ENST00000377199 C16orf71Q8IYS4 520 aaPredicted RBP20.3■□□□□ 0.84
TRIM27-202ENST00000377199 GCC1Q96CN9 775 aa20.3■□□□□ 0.84
TRIM27-202ENST00000377199 CHMP5Q9NZZ3 219 aa20.3■□□□□ 0.84
TRIM27-202ENST00000377199 MCM4P33991 863 aa20.29■□□□□ 0.84
TRIM27-202ENST00000377199 TBC1D9Q6ZT07 1266 aa20.29■□□□□ 0.84
TRIM27-202ENST00000377199 ROBO2Q9HCK4 1378 aa20.29■□□□□ 0.84
TRIM27-202ENST00000377199 FOXO3O43524 673 aa20.29■□□□□ 0.84
TRIM27-202ENST00000377199 API5Q9BZZ5 524 aaKnown RBP20.29■□□□□ 0.84
TRIM27-202ENST00000377199 BMP2KLQ5H9B9 411 aa20.28■□□□□ 0.84
TRIM27-202ENST00000377199 PPP6R1Q9UPN7 881 aa20.28■□□□□ 0.84
TRIM27-202ENST00000377199 DIP2BQ9P265 1576 aa20.28■□□□□ 0.84
TRIM27-202ENST00000377199 ABCC4O15439 1325 aa20.28■□□□□ 0.84
TRIM27-202ENST00000377199 HDGFP51858 240 aaKnown RBP20.28■□□□□ 0.84
TRIM27-202ENST00000377199 ARHGAP45Q92619 1136 aa20.28■□□□□ 0.84
TRIM27-202ENST00000377199 ANO8Q9HCE9 1232 aaPredicted RBP20.28■□□□□ 0.84
TRIM27-202ENST00000377199 SLC4A10Q6U841 1118 aa20.28■□□□□ 0.84
TRIM27-202ENST00000377199 TTC21BQ7Z4L5 1316 aa20.27■□□□□ 0.84
TRIM27-202ENST00000377199 CDK12Q9NYV4 1490 aaPredicted RBP20.27■□□□□ 0.84
TRIM27-202ENST00000377199 CD2BP2O95400 341 aaKnown RBP20.27■□□□□ 0.83
TRIM27-202ENST00000377199 NUTM2GQ5VZR2 741 aa20.27■□□□□ 0.83
TRIM27-202ENST00000377199 ZNF692Q9BU19 519 aaPredicted RBP20.27■□□□□ 0.83
TRIM27-202ENST00000377199 CHMP4BQ9H444 224 aaKnown RBP20.27■□□□□ 0.83
TRIM27-202ENST00000377199 RIMBP3CA6NJZ7 1639 aa20.27■□□□□ 0.83
TRIM27-202ENST00000377199 RIMBP3BA6NNM3 1639 aa20.27■□□□□ 0.83
TRIM27-202ENST00000377199 RIMBP3Q9UFD9 1639 aa20.27■□□□□ 0.83
TRIM27-202ENST00000377199 DLC1Q96QB1 1528 aa20.27■□□□□ 0.83
TRIM27-202ENST00000377199 SMARCA5O60264 1052 aaPredicted RBP20.26■□□□□ 0.83
TRIM27-202ENST00000377199 SPATA31D1Q6ZQQ2 1576 aa20.26■□□□□ 0.83
TRIM27-202ENST00000377199 LTKP29376 864 aa20.25■□□□□ 0.83
TRIM27-202ENST00000377199 BRPF1P55201 1214 aaPredicted RBP20.25■□□□□ 0.83
TRIM27-202ENST00000377199 OTUD7AQ8TE49 926 aaPredicted RBP20.25■□□□□ 0.83
TRIM27-202ENST00000377199 NECTIN2Q92692 538 aa20.25■□□□□ 0.83
TRIM27-202ENST00000377199 CDC42BPGQ6DT37 1551 aa20.25■□□□□ 0.83
TRIM27-202ENST00000377199 PTCH1Q13635 1447 aa20.25■□□□□ 0.83
TRIM27-202ENST00000377199 AATKQ6ZMQ8 1374 aa20.24■□□□□ 0.83
TRIM27-202ENST00000377199 TNRQ92752 1358 aa20.24■□□□□ 0.83
TRIM27-202ENST00000377199 PLEKHG5O94827 1062 aa20.23■□□□□ 0.83
TRIM27-202ENST00000377199 RBM25P49756 843 aaKnown RBP20.23■□□□□ 0.83
TRIM27-202ENST00000377199 SLC4A2P04920 1241 aa20.23■□□□□ 0.83
TRIM27-202ENST00000377199 F6X3S4 739 aa20.22■□□□□ 0.83
TRIM27-202ENST00000377199 TRAK2O60296 914 aa20.22■□□□□ 0.83
TRIM27-202ENST00000377199 GSPT1P15170 499 aaKnown RBP20.22■□□□□ 0.83
TRIM27-202ENST00000377199 MEIS3Q99687 375 aa20.22■□□□□ 0.83
TRIM27-202ENST00000377199 NRXN3Q9Y4C0 1643 aa20.22■□□□□ 0.83
TRIM27-202ENST00000377199 NGDNQ8NEJ9 315 aaKnown RBP20.21■□□□□ 0.83
TRIM27-202ENST00000377199 SETD1AO15047 1707 aaKnown RBP20.2■□□□□ 0.82
TRIM27-202ENST00000377199 LTV1Q96GA3 475 aaPredicted RBP20.2■□□□□ 0.82
TRIM27-202ENST00000377199 KIF2CQ99661 725 aa20.2■□□□□ 0.82
TRIM27-202ENST00000377199 AGLP35573 1532 aa20.2■□□□□ 0.82
TRIM27-202ENST00000377199 TMEM2Q9UHN6 1383 aa20.2■□□□□ 0.82
TRIM27-202ENST00000377199 PLEKHM2Q8IWE5 1019 aa20.19■□□□□ 0.82
TRIM27-202ENST00000377199 RTF1Q92541 710 aaKnown RBP20.19■□□□□ 0.82
TRIM27-202ENST00000377199 DLG5Q8TDM6 1919 aa20.19■□□□□ 0.82
TRIM27-202ENST00000377199 AMPHP49418 695 aa20.19■□□□□ 0.82
TRIM27-202ENST00000377199 PANK2Q9BZ23 570 aa20.19■□□□□ 0.82
TRIM27-202ENST00000377199 TSPYL4Q9UJ04 414 aa20.19■□□□□ 0.82
TRIM27-202ENST00000377199 MSH6P52701 1360 aa20.19■□□□□ 0.82
TRIM27-202ENST00000377199 PIK3R4Q99570 1358 aa20.19■□□□□ 0.82
TRIM27-202ENST00000377199 GOLGA6L3A6NEY3 463 aa20.19■□□□□ 0.82
TRIM27-202ENST00000377199 CDC45O75419 566 aa20.19■□□□□ 0.82
TRIM27-202ENST00000377199 C14orf37Q86TY3 774 aa20.19■□□□□ 0.82
TRIM27-202ENST00000377199 MTHFSDQ2M296 383 aaKnown RBP20.18■□□□□ 0.82
TRIM27-202ENST00000377199 G2E3Q7L622 706 aa20.18■□□□□ 0.82
TRIM27-202ENST00000377199 TNPO1Q92973 898 aaKnown RBP20.18■□□□□ 0.82
TRIM27-202ENST00000377199 MAP3K19Q56UN5 1328 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms