RNA–Protein interactions for RNA: ENST00000377067.8

GPC5-201, Transcript of glypican 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC5, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-201ENST00000377067 PLEKHM2Q8IWE5 1019 aa23.37■■□□□ 1.33
GPC5-201ENST00000377067 C16orf71Q8IYS4 520 aaPredicted RBP23.37■■□□□ 1.33
GPC5-201ENST00000377067 FOXD4L6Q3SYB3 417 aaPredicted RBP23.36■■□□□ 1.33
GPC5-201ENST00000377067 FOXD4L3Q6VB84 417 aaPredicted RBP23.36■■□□□ 1.33
GPC5-201ENST00000377067 TTC12Q9H892 705 aaPredicted RBP23.36■■□□□ 1.33
GPC5-201ENST00000377067 ST18O60284 1047 aa23.35■■□□□ 1.33
GPC5-201ENST00000377067 NOLC1Q14978 699 aaKnown RBP eCLIP23.35■■□□□ 1.33
GPC5-201ENST00000377067 IGSF3O75054 1194 aa23.34■■□□□ 1.33
GPC5-201ENST00000377067 ADGRL1O94910 1474 aa23.34■■□□□ 1.33
GPC5-201ENST00000377067 ALDH1L2Q3SY69 923 aa23.34■■□□□ 1.33
GPC5-201ENST00000377067 PRIMPOLQ96LW4 560 aa23.34■■□□□ 1.33
GPC5-201ENST00000377067 UGGT1Q9NYU2 1555 aa23.34■■□□□ 1.33
GPC5-201ENST00000377067 ELL2O00472 640 aaPredicted RBP23.33■■□□□ 1.33
GPC5-201ENST00000377067 MBD3O95983 291 aa23.33■■□□□ 1.33
GPC5-201ENST00000377067 OTUD7AQ8TE49 926 aaPredicted RBP23.33■■□□□ 1.33
GPC5-201ENST00000377067 PIBF1Q8WXW3 757 aa23.33■■□□□ 1.32
GPC5-201ENST00000377067 GTPBP4Q9BZE4 634 aaKnown RBP23.33■■□□□ 1.32
GPC5-201ENST00000377067 KIAA1210Q9ULL0 1709 aa23.32■■□□□ 1.32
GPC5-201ENST00000377067 TMEM132EQ6IEE7 984 aa23.32■■□□□ 1.32
GPC5-201ENST00000377067 USP25Q9UHP3 1055 aa23.32■■□□□ 1.32
GPC5-201ENST00000377067 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.32■■□□□ 1.32
GPC5-201ENST00000377067 IL16Q14005 1332 aa23.32■■□□□ 1.32
GPC5-201ENST00000377067 ATAD2Q6PL18 1390 aa23.32■■□□□ 1.32
GPC5-201ENST00000377067 SBNO2Q9Y2G9 1366 aa23.32■■□□□ 1.32
GPC5-201ENST00000377067 TTC22Q5TAA0 569 aa23.32■■□□□ 1.32
GPC5-201ENST00000377067 TPRNQ4KMQ1 711 aa23.31■■□□□ 1.32
GPC5-201ENST00000377067 BCL2L12Q9HB09 334 aa23.31■■□□□ 1.32
GPC5-201ENST00000377067 KIF3AQ9Y496 699 aa23.31■■□□□ 1.32
GPC5-201ENST00000377067 HMGN5P82970 282 aaKnown RBP23.31■■□□□ 1.32
GPC5-201ENST00000377067 GDPD2Q9HCC8 539 aa23.31■■□□□ 1.32
GPC5-201ENST00000377067 MED14O60244 1454 aa23.31■■□□□ 1.32
GPC5-201ENST00000377067 MAP3K4Q9Y6R4 1608 aa23.3■■□□□ 1.32
GPC5-201ENST00000377067 INTS3Q68E01 1043 aaKnown RBP23.3■■□□□ 1.32
GPC5-201ENST00000377067 CHGAP10645 457 aaKnown RBP23.3■■□□□ 1.32
GPC5-201ENST00000377067 APBB1O00213 710 aa23.29■■□□□ 1.32
GPC5-201ENST00000377067 BBXQ8WY36 941 aaPredicted RBP23.29■■□□□ 1.32
GPC5-201ENST00000377067 GGNBP2Q9H3C7 697 aa23.29■■□□□ 1.32
GPC5-201ENST00000377067 GTF2F1P35269 517 aaKnown RBP eCLIP23.29■■□□□ 1.32
GPC5-201ENST00000377067 NOL8Q76FK4 1167 aaKnown RBP23.28■■□□□ 1.32
GPC5-201ENST00000377067 TSPYL6Q8N831 410 aa23.28■■□□□ 1.32
GPC5-201ENST00000377067 TRAPPC8Q9Y2L5 1435 aa23.28■■□□□ 1.32
GPC5-201ENST00000377067 KIF20AO95235 890 aa23.28■■□□□ 1.32
GPC5-201ENST00000377067 MRPL50Q8N5N7 158 aaKnown RBP23.28■■□□□ 1.32
GPC5-201ENST00000377067 THUMPD2Q9BTF0 503 aaKnown RBP23.28■■□□□ 1.32
GPC5-201ENST00000377067 GADD45BO75293 160 aaPredicted RBP23.27■■□□□ 1.32
GPC5-201ENST00000377067 SDSP20132 328 aa23.27■■□□□ 1.32
GPC5-201ENST00000377067 PDE4CQ08493 712 aa23.26■■□□□ 1.31
GPC5-201ENST00000377067 PDCL2Q8N4E4 241 aa23.26■■□□□ 1.31
GPC5-201ENST00000377067 AFAP1Q8N556 730 aa23.26■■□□□ 1.31
GPC5-201ENST00000377067 LETM1O95202 739 aaPredicted RBP23.25■■□□□ 1.31
GPC5-201ENST00000377067 U2AF2P26368 475 aaKnown RBP eCLIP23.25■■□□□ 1.31
GPC5-201ENST00000377067 SPAG9O60271 1321 aaKnown RBP23.25■■□□□ 1.31
GPC5-201ENST00000377067 ADCY5O95622 1261 aa23.25■■□□□ 1.31
GPC5-201ENST00000377067 TMX3Q96JJ7 454 aa23.25■■□□□ 1.31
GPC5-201ENST00000377067 CHMP4BQ9H444 224 aaKnown RBP23.25■■□□□ 1.31
GPC5-201ENST00000377067 SMARCA5O60264 1052 aaPredicted RBP23.24■■□□□ 1.31
GPC5-201ENST00000377067 MYOM2P54296 1465 aa23.24■■□□□ 1.31
GPC5-201ENST00000377067 VAMP4O75379 141 aa23.24■■□□□ 1.31
GPC5-201ENST00000377067 NEK4P51957 841 aa23.24■■□□□ 1.31
GPC5-201ENST00000377067 CABP2Q9NPB3 220 aa23.23■■□□□ 1.31
GPC5-201ENST00000377067 BRD1O95696 1058 aa23.23■■□□□ 1.31
GPC5-201ENST00000377067 PLCB2Q00722 1185 aa23.23■■□□□ 1.31
GPC5-201ENST00000377067 FKBP5Q13451 457 aaPredicted RBP23.23■■□□□ 1.31
GPC5-201ENST00000377067 SYAP1Q96A49 352 aaPredicted RBP23.23■■□□□ 1.31
GPC5-201ENST00000377067 GTF2E1P29083 439 aaPredicted RBP23.22■■□□□ 1.31
GPC5-201ENST00000377067 PPRC1Q5VV67 1664 aaKnown RBP23.22■■□□□ 1.31
GPC5-201ENST00000377067 SAFB2Q14151 953 aaKnown RBP eCLIP23.21■■□□□ 1.313e-6■■□□□ 13.9
GPC5-201ENST00000377067 MYO3AQ8NEV4 1616 aa23.21■■□□□ 1.31
GPC5-201ENST00000377067 KIF3BO15066 747 aa23.21■■□□□ 1.31
GPC5-201ENST00000377067 EFCAB2Q5VUJ9 269 aa23.2■■□□□ 1.3
GPC5-201ENST00000377067 CASC1Q6TDU7 716 aa23.2■■□□□ 1.3
GPC5-201ENST00000377067 DCTPP1Q9H773 170 aa23.2■■□□□ 1.3
GPC5-201ENST00000377067 CFAP44Q96MT7 982 aa23.2■■□□□ 1.3
GPC5-201ENST00000377067 RIOK3O14730 519 aaKnown RBP23.19■■□□□ 1.3
GPC5-201ENST00000377067 HCLS1P14317 486 aaPredicted RBP23.19■■□□□ 1.3
GPC5-201ENST00000377067 ABCC4O15439 1325 aa23.19■■□□□ 1.3
GPC5-201ENST00000377067 ANKRD36BQ8N2N9 1353 aa23.19■■□□□ 1.3
GPC5-201ENST00000377067 SPTLC3Q9NUV7 552 aa23.19■■□□□ 1.3
GPC5-201ENST00000377067 BRPF1P55201 1214 aaPredicted RBP23.19■■□□□ 1.3
GPC5-201ENST00000377067 PIK3R4Q99570 1358 aa23.18■■□□□ 1.3
GPC5-201ENST00000377067 ARHGAP45Q92619 1136 aa23.18■■□□□ 1.3
GPC5-201ENST00000377067 PTCH1Q13635 1447 aa23.18■■□□□ 1.3
GPC5-201ENST00000377067 REC8O95072 547 aa23.18■■□□□ 1.3
GPC5-201ENST00000377067 USP48Q86UV5 1035 aa23.17■■□□□ 1.3
GPC5-201ENST00000377067 NSD2O96028 1365 aa23.17■■□□□ 1.3
GPC5-201ENST00000377067 DIAPH1O60610 1272 aaKnown RBP23.17■■□□□ 1.3
GPC5-201ENST00000377067 USP32Q8NFA0 1604 aa23.17■■□□□ 1.3
GPC5-201ENST00000377067 PHF14O94880 888 aa23.16■■□□□ 1.3
GPC5-201ENST00000377067 QRICH2Q9H0J4 1663 aa23.16■■□□□ 1.3
GPC5-201ENST00000377067 PYCARDQ9ULZ3 195 aa23.16■■□□□ 1.3
GPC5-201ENST00000377067 PRKAR2BP31323 418 aa23.16■■□□□ 1.3
GPC5-201ENST00000377067 REREQ9P2R6 1566 aa23.15■■□□□ 1.3
GPC5-201ENST00000377067 ERC2O15083 957 aa23.15■■□□□ 1.3
GPC5-201ENST00000377067 COL3A1P02461 1466 aaPredicted RBP23.15■■□□□ 1.3
GPC5-201ENST00000377067 UVSSAQ2YD98 709 aa23.15■■□□□ 1.3
GPC5-201ENST00000377067 FAM184AQ8NB25 1140 aa23.14■■□□□ 1.3
GPC5-201ENST00000377067 SENP3Q9H4L4 574 aaPredicted RBP23.14■■□□□ 1.3
GPC5-201ENST00000377067 CGNQ9P2M7 1197 aaKnown RBP23.14■■□□□ 1.3
GPC5-201ENST00000377067 ZNF428Q96B54 188 aa23.14■■□□□ 1.29
GPC5-201ENST00000377067 EVC2Q86UK5 1308 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms