RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 NR1H3Q13133 447 aa8.84□□□□□ -0.99
SSX3-202ENST00000376893 TATDN2Q93075 761 aa8.84□□□□□ -0.99
SSX3-202ENST00000376893 TSKSQ9UJT2 592 aa8.84□□□□□ -0.99
SSX3-202ENST00000376893 MAGI3Q5TCQ9 1506 aa8.84□□□□□ -0.99
SSX3-202ENST00000376893 KDM6BO15054 1643 aa8.83□□□□□ -1
SSX3-202ENST00000376893 ABCA9Q8IUA7 1624 aa8.83□□□□□ -1
SSX3-202ENST00000376893 PPP1R3GB7ZBB8 358 aa8.83□□□□□ -1
SSX3-202ENST00000376893 CFAP99D6REC4 459 aa8.83□□□□□ -1
SSX3-202ENST00000376893 DRC1Q96MC2 740 aa8.83□□□□□ -1
SSX3-202ENST00000376893 CFAP43Q8NDM7 1665 aa8.83□□□□□ -1
SSX3-202ENST00000376893 CASKIN1Q8WXD9 1431 aa8.82□□□□□ -1
SSX3-202ENST00000376893 MARSP56192 900 aaKnown RBP8.82□□□□□ -1
SSX3-202ENST00000376893 NOM1Q5C9Z4 860 aaKnown RBP8.82□□□□□ -1
SSX3-202ENST00000376893 PACS2Q86VP3 889 aa8.82□□□□□ -1
SSX3-202ENST00000376893 C1orf216Q8TAB5 229 aa8.82□□□□□ -1
SSX3-202ENST00000376893 EPS8L1Q8TE68 723 aa8.82□□□□□ -1
SSX3-202ENST00000376893 SREK1Q8WXA9 508 aaKnown RBP8.82□□□□□ -1
SSX3-202ENST00000376893 USP17L3A6NCW0 530 aa8.81□□□□□ -1
SSX3-202ENST00000376893 USP17L4A6NCW7 530 aa8.81□□□□□ -1
SSX3-202ENST00000376893 GRIPAP1Q4V328 841 aa8.81□□□□□ -1
SSX3-202ENST00000376893 ZNF326Q5BKZ1 582 aaKnown RBP8.81□□□□□ -1
SSX3-202ENST00000376893 USP17L2Q6R6M4 530 aa8.81□□□□□ -1
SSX3-202ENST00000376893 USP17L1Q7RTZ2 530 aa8.81□□□□□ -1
SSX3-202ENST00000376893 CDAN1Q8IWY9 1227 aa8.81□□□□□ -1
SSX3-202ENST00000376893 BCL2L12Q9HB09 334 aa8.81□□□□□ -1
SSX3-202ENST00000376893 PNMA3Q9UL41 463 aa8.81□□□□□ -1
SSX3-202ENST00000376893 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.8□□□□□ -1
SSX3-202ENST00000376893 TRIM6-TRIM34B2RNG4 842 aa8.8□□□□□ -1
SSX3-202ENST00000376893 LZTS3O60299 673 aaPredicted RBP8.8□□□□□ -1
SSX3-202ENST00000376893 NPAS4Q8IUM7 802 aa8.8□□□□□ -1
SSX3-202ENST00000376893 CDCA7Q9BWT1 371 aaPredicted RBP8.8□□□□□ -1
SSX3-202ENST00000376893 CCDC18Q5T9S5 1454 aa8.8□□□□□ -1
SSX3-202ENST00000376893 PSDA5PKW4 1024 aaPredicted RBP8.79□□□□□ -1
SSX3-202ENST00000376893 USP17L15C9J2P7 530 aa8.79□□□□□ -1
SSX3-202ENST00000376893 USP17L10C9JJH3 530 aa8.79□□□□□ -1
SSX3-202ENST00000376893 USP17L13C9JLJ4 530 aa8.79□□□□□ -1
SSX3-202ENST00000376893 USP17L12C9JPN9 530 aa8.79□□□□□ -1
SSX3-202ENST00000376893 USP17L11C9JVI0 530 aa8.79□□□□□ -1
SSX3-202ENST00000376893 USP17L21D6R901 530 aa8.79□□□□□ -1
SSX3-202ENST00000376893 USP17L18D6R9N7 530 aa8.79□□□□□ -1
SSX3-202ENST00000376893 USP17L22D6RA61 530 aa8.79□□□□□ -1
SSX3-202ENST00000376893 USP17L17D6RBQ6 530 aa8.79□□□□□ -1
SSX3-202ENST00000376893 USP17L19D6RCP7 530 aa8.79□□□□□ -1
SSX3-202ENST00000376893 USP17L20D6RJB6 530 aa8.79□□□□□ -1
SSX3-202ENST00000376893 COL9A1P20849 921 aa8.79□□□□□ -1
SSX3-202ENST00000376893 USP17L24Q0WX57 530 aa8.79□□□□□ -1
SSX3-202ENST00000376893 NR6A1Q15406 480 aa8.79□□□□□ -1
SSX3-202ENST00000376893 SWI5Q1ZZU3 235 aa8.79□□□□□ -1
SSX3-202ENST00000376893 DESI1Q6ICB0 168 aa8.79□□□□□ -1
SSX3-202ENST00000376893 GIPC2Q8TF65 315 aa8.79□□□□□ -1
SSX3-202ENST00000376893 ZNF592Q92610 1267 aa8.79□□□□□ -1
SSX3-202ENST00000376893 TEX14Q8IWB6 1497 aa8.78□□□□□ -1
SSX3-202ENST00000376893 USP17L5A8MUK1 530 aa8.78□□□□□ -1
SSX3-202ENST00000376893 POTEB2H3BUK9 544 aa8.78□□□□□ -1
SSX3-202ENST00000376893 ZC3H6P61129 1189 aaKnown RBP8.78□□□□□ -1
SSX3-202ENST00000376893 EGFL7Q9UHF1 273 aa8.78□□□□□ -1
SSX3-202ENST00000376893 CD109Q6YHK3 1445 aa8.78□□□□□ -1
SSX3-202ENST00000376893 FRMPD1Q5SYB0 1578 aa8.78□□□□□ -1
SSX3-202ENST00000376893 COL17A1Q9UMD9 1497 aaPredicted RBP8.77□□□□□ -1
SSX3-202ENST00000376893 C3orf80F5H4A9 247 aa8.77□□□□□ -1.01
SSX3-202ENST00000376893 ATP5J2-PTCD1G3V325 749 aa8.77□□□□□ -1.01
SSX3-202ENST00000376893 PTK7Q13308 1070 aa8.77□□□□□ -1.01
SSX3-202ENST00000376893 RNF135Q8IUD6 432 aa8.77□□□□□ -1.01
SSX3-202ENST00000376893 TSC1Q92574 1164 aa8.77□□□□□ -1.01
SSX3-202ENST00000376893 KCNH8Q96L42 1107 aa8.77□□□□□ -1.01
SSX3-202ENST00000376893 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.77□□□□□ -1.01
SSX3-202ENST00000376893 TROQ12816 1431 aaPredicted RBP8.77□□□□□ -1.01
SSX3-202ENST00000376893 ZC3H4Q9UPT8 1303 aaKnown RBP8.77□□□□□ -1.01
SSX3-202ENST00000376893 ZBBXA8MT70 800 aa8.76□□□□□ -1.01
SSX3-202ENST00000376893 GUCA2AQ02747 115 aa8.76□□□□□ -1.01
SSX3-202ENST00000376893 COL19A1Q14993 1142 aa8.76□□□□□ -1.01
SSX3-202ENST00000376893 LARP1Q6PKG0 1096 aaKnown RBP8.76□□□□□ -1.01
SSX3-202ENST00000376893 FAM200AQ8TCP9 573 aa8.76□□□□□ -1.01
SSX3-202ENST00000376893 BCL11AQ9H165 835 aa8.76□□□□□ -1.01
SSX3-202ENST00000376893 ZSWIM6Q9HCJ5 1215 aa8.76□□□□□ -1.01
SSX3-202ENST00000376893 SLAIN2Q9P270 581 aa8.76□□□□□ -1.01
SSX3-202ENST00000376893 VPS8Q8N3P4 1428 aa8.76□□□□□ -1.01
SSX3-202ENST00000376893 MYO5CQ9NQX4 1742 aa8.75□□□□□ -1.01
SSX3-202ENST00000376893 ANKRD33BA6NCL7 494 aa8.75□□□□□ -1.01
SSX3-202ENST00000376893 C6orf229H3BNL8 230 aa8.75□□□□□ -1.01
SSX3-202ENST00000376893 ATP2B4P23634 1241 aa8.75□□□□□ -1.01
SSX3-202ENST00000376893 PPP4R3BQ5MIZ7 849 aa8.75□□□□□ -1.01
SSX3-202ENST00000376893 EHBP1L1Q8N3D4 1523 aa8.75□□□□□ -1.01
SSX3-202ENST00000376893 TIAM1Q13009 1591 aa8.74□□□□□ -1.01
SSX3-202ENST00000376893 PREX2Q70Z35 1606 aa8.74□□□□□ -1.01
SSX3-202ENST00000376893 PIK3CDO00329 1044 aa8.74□□□□□ -1.01
SSX3-202ENST00000376893 SLC10A3P09131 477 aa8.74□□□□□ -1.01
SSX3-202ENST00000376893 FBXO45P0C2W1 286 aa8.74□□□□□ -1.01
SSX3-202ENST00000376893 SKIP12755 728 aa8.74□□□□□ -1.01
SSX3-202ENST00000376893 PTPREP23469 700 aa8.74□□□□□ -1.01
SSX3-202ENST00000376893 MCCD1P59942 119 aaPredicted RBP8.74□□□□□ -1.01
SSX3-202ENST00000376893 SF3A1Q15459 793 aaKnown RBP8.74□□□□□ -1.01
SSX3-202ENST00000376893 CRTC2Q53ET0 693 aaPredicted RBP8.74□□□□□ -1.01
SSX3-202ENST00000376893 MKRN1Q9UHC7 482 aaKnown RBP8.74□□□□□ -1.01
SSX3-202ENST00000376893 CFAP74Q9C0B2 1584 aa8.73□□□□□ -1.01
SSX3-202ENST00000376893 SERPINB4P48594 390 aa8.73□□□□□ -1.01
SSX3-202ENST00000376893 UBXN4Q92575 508 aa8.73□□□□□ -1.01
SSX3-202ENST00000376893 HLA-CQ95604 372 aa8.73□□□□□ -1.01
SSX3-202ENST00000376893 FAM163AQ96GL9 167 aaPredicted RBP8.73□□□□□ -1.01
SSX3-202ENST00000376893 FANCAO15360 1455 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms