RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 MON2Q7Z3U7 1717 aa29.75■■■□□ 2.35
VSX1-201ENST00000376707 CAMKK2Q96RR4 588 aa29.75■■■□□ 2.35
VSX1-201ENST00000376707 C11orf95C9JLR9 678 aaPredicted RBP29.73■■■□□ 2.35
VSX1-201ENST00000376707 CSB-PGBD3P0DP91 1061 aa29.73■■■□□ 2.35
VSX1-201ENST00000376707 SLC12A5Q9H2X9 1139 aa29.73■■■□□ 2.35
VSX1-201ENST00000376707 PARD3Q8TEW0 1356 aa29.73■■■□□ 2.35
VSX1-201ENST00000376707 CD163L1Q9NR16 1453 aa29.73■■■□□ 2.35
VSX1-201ENST00000376707 NFAT5O94916 1531 aa29.72■■■□□ 2.35
VSX1-201ENST00000376707 DDB1Q16531 1140 aa29.72■■■□□ 2.35
VSX1-201ENST00000376707 R3HDM1Q15032 1099 aaKnown RBP29.71■■■□□ 2.35
VSX1-201ENST00000376707 TERF2IPQ9NYB0 399 aa29.71■■■□□ 2.35
VSX1-201ENST00000376707 USP31Q70CQ4 1352 aa29.71■■■□□ 2.35
VSX1-201ENST00000376707 NME9Q86XW9 330 aa29.7■■■□□ 2.35
VSX1-201ENST00000376707 PUS7Q96PZ0 661 aaKnown RBP29.7■■■□□ 2.35
VSX1-201ENST00000376707 OVOS2A0A0G2JMS6 1433 aa29.7■■■□□ 2.34
VSX1-201ENST00000376707 OVOS2A0A0J9YW53 1432 aa29.7■■■□□ 2.34
VSX1-201ENST00000376707 OVOS2Q6IE36 1432 aa29.7■■■□□ 2.34
VSX1-201ENST00000376707 CDCA7Q9BWT1 371 aaPredicted RBP29.69■■■□□ 2.34
VSX1-201ENST00000376707 CARD10Q9BWT7 1032 aa29.68■■■□□ 2.34
VSX1-201ENST00000376707 ST20-MTHFSA0A0A6YYL1 179 aa29.67■■■□□ 2.34
VSX1-201ENST00000376707 EDC4Q6P2E9 1401 aaKnown RBP29.67■■■□□ 2.34
VSX1-201ENST00000376707 LRRC37A3O60309 1634 aa29.67■■■□□ 2.34
VSX1-201ENST00000376707 LRP5O75197 1615 aa29.67■■■□□ 2.34
VSX1-201ENST00000376707 A0A1W2PP64 1363 aa29.65■■■□□ 2.34
VSX1-201ENST00000376707 ABCC6O95255 1503 aa29.65■■■□□ 2.34
VSX1-201ENST00000376707 SLC24A1O60721 1099 aa29.64■■■□□ 2.34
VSX1-201ENST00000376707 TESK2Q96S53 571 aa29.64■■■□□ 2.34
VSX1-201ENST00000376707 RGPD5Q99666 1765 aa29.62■■■□□ 2.33
VSX1-201ENST00000376707 USP54Q70EL1 1684 aa29.62■■■□□ 2.33
VSX1-201ENST00000376707 CCDC7Q96M83 1385 aa29.62■■■□□ 2.33
VSX1-201ENST00000376707 PEAK1Q9H792 1746 aa29.61■■■□□ 2.33
VSX1-201ENST00000376707 NINLQ9Y2I6 1382 aa29.61■■■□□ 2.33
VSX1-201ENST00000376707 WNK3Q9BYP7 1800 aa29.6■■■□□ 2.33
VSX1-201ENST00000376707 NBPF14Q5TI25 921 aa29.59■■■□□ 2.33
VSX1-201ENST00000376707 MARCH10Q8NA82 808 aaPredicted RBP29.59■■■□□ 2.33
VSX1-201ENST00000376707 RREB1Q92766 1687 aa29.58■■■□□ 2.33
VSX1-201ENST00000376707 ERBB3P21860 1342 aa29.57■■■□□ 2.32
VSX1-201ENST00000376707 EXOC5O00471 708 aa29.57■■■□□ 2.32
VSX1-201ENST00000376707 NLRP2Q9NX02 1062 aa29.56■■■□□ 2.32
VSX1-201ENST00000376707 BCL11BQ9C0K0 894 aaPredicted RBP29.55■■■□□ 2.32
VSX1-201ENST00000376707 NUP188Q5SRE5 1749 aa29.54■■■□□ 2.32
VSX1-201ENST00000376707 ANKRD24Q8TF21 1146 aa29.53■■■□□ 2.32
VSX1-201ENST00000376707 BCL9O00512 1426 aa29.53■■■□□ 2.32
VSX1-201ENST00000376707 USP47Q96K76 1375 aa29.52■■■□□ 2.32
VSX1-201ENST00000376707 PLSCR1O15162 318 aa29.52■■■□□ 2.32
VSX1-201ENST00000376707 LTN1O94822 1766 aa29.52■■■□□ 2.32
VSX1-201ENST00000376707 TMF1P82094 1093 aa29.51■■■□□ 2.31
VSX1-201ENST00000376707 PTF1AQ7RTS3 328 aa29.5■■■□□ 2.31
VSX1-201ENST00000376707 COG3Q96JB2 828 aa29.5■■■□□ 2.31
VSX1-201ENST00000376707 TNS2Q63HR2 1409 aa29.5■■■□□ 2.31
VSX1-201ENST00000376707 CLSPNQ9HAW4 1339 aa29.49■■■□□ 2.31
VSX1-201ENST00000376707 SBF2Q86WG5 1849 aa29.49■■■□□ 2.31
VSX1-201ENST00000376707 ANKRD36BQ8N2N9 1353 aa29.48■■■□□ 2.31
VSX1-201ENST00000376707 IL2RBP14784 551 aa29.47■■■□□ 2.31
VSX1-201ENST00000376707 IP6K1Q92551 441 aa29.46■■■□□ 2.31
VSX1-201ENST00000376707 TIMELESSQ9UNS1 1208 aa29.46■■■□□ 2.31
VSX1-201ENST00000376707 RGPD3A6NKT7 1758 aaPredicted RBP29.46■■■□□ 2.31
VSX1-201ENST00000376707 RGPD4Q7Z3J3 1758 aa29.46■■■□□ 2.31
VSX1-201ENST00000376707 CDCA8Q53HL2 280 aa29.42■■■□□ 2.3
VSX1-201ENST00000376707 LTV1Q96GA3 475 aaPredicted RBP29.42■■■□□ 2.3
VSX1-201ENST00000376707 MAP3K19Q56UN5 1328 aa29.41■■■□□ 2.3
VSX1-201ENST00000376707 AMPHP49418 695 aa29.4■■■□□ 2.3
VSX1-201ENST00000376707 PCGF6Q9BYE7 350 aa29.4■■■□□ 2.3
VSX1-201ENST00000376707 KCNQ2O43526 872 aa29.38■■■□□ 2.29
VSX1-201ENST00000376707 PROM2Q8N271 834 aa29.38■■■□□ 2.29
VSX1-201ENST00000376707 FBLN1P23142 703 aa29.37■■■□□ 2.29
VSX1-201ENST00000376707 HOXC9P31274 260 aa29.37■■■□□ 2.29
VSX1-201ENST00000376707 ACSBG1Q96GR2 724 aa29.37■■■□□ 2.29
VSX1-201ENST00000376707 ANO8Q9HCE9 1232 aaPredicted RBP29.37■■■□□ 2.29
VSX1-201ENST00000376707 GGNBP2Q9H3C7 697 aa29.36■■■□□ 2.29
VSX1-201ENST00000376707 FYB1O15117 783 aa29.35■■■□□ 2.29
VSX1-201ENST00000376707 TXNRD1Q16881 649 aa29.35■■■□□ 2.29
VSX1-201ENST00000376707 SPON1Q9HCB6 807 aa29.35■■■□□ 2.29
VSX1-201ENST00000376707 NHSQ6T4R5 1651 aa29.33■■■□□ 2.29
VSX1-201ENST00000376707 FAM208AQ9UK61 1670 aaKnown RBP29.33■■■□□ 2.29
VSX1-201ENST00000376707 RTL1A6NKG5 1358 aa29.31■■■□□ 2.28
VSX1-201ENST00000376707 RRS1Q15050 365 aaKnown RBP29.31■■■□□ 2.28
VSX1-201ENST00000376707 PPP1R1BQ9UD71 204 aaPredicted RBP29.31■■■□□ 2.28
VSX1-201ENST00000376707 DDX54Q8TDD1 881 aaKnown RBP29.3■■■□□ 2.28
VSX1-201ENST00000376707 STK32BQ9NY57 414 aa29.3■■■□□ 2.28
VSX1-201ENST00000376707 SLC15A2Q16348 729 aa29.24■■■□□ 2.27
VSX1-201ENST00000376707 SMG6Q86US8 1419 aaKnown RBP29.24■■■□□ 2.27
VSX1-201ENST00000376707 PDGFDQ9GZP0 370 aaPredicted RBP29.23■■■□□ 2.27
VSX1-201ENST00000376707 NSD3Q9BZ95 1437 aa29.22■■■□□ 2.27
VSX1-201ENST00000376707 CARD14Q9BXL6 1004 aa29.22■■■□□ 2.27
VSX1-201ENST00000376707 CASZ1Q86V15 1759 aa29.21■■■□□ 2.27
VSX1-201ENST00000376707 ZCRB1Q8TBF4 217 aaKnown RBP29.21■■■□□ 2.27
VSX1-201ENST00000376707 KIF20BQ96Q89 1820 aa29.21■■■□□ 2.27
VSX1-201ENST00000376707 ZBTB7AO95365 584 aa29.2■■■□□ 2.26
VSX1-201ENST00000376707 NBPF6Q5VWK0 638 aa29.2■■■□□ 2.26
VSX1-201ENST00000376707 NBPF4Q96M43 638 aa29.2■■■□□ 2.26
VSX1-201ENST00000376707 MYOM1P52179 1685 aa29.2■■■□□ 2.26
VSX1-201ENST00000376707 BTAF1O14981 1849 aa29.2■■■□□ 2.26
VSX1-201ENST00000376707 MEGF6O75095 1541 aa29.19■■■□□ 2.26
VSX1-201ENST00000376707 INSRP06213 1382 aa29.18■■■□□ 2.26
VSX1-201ENST00000376707 FLT4P35916 1363 aa29.18■■■□□ 2.26
VSX1-201ENST00000376707 USHBP1Q8N6Y0 703 aa29.18■■■□□ 2.26
VSX1-201ENST00000376707 SYTL4Q96C24 671 aaPredicted RBP29.18■■■□□ 2.26
VSX1-201ENST00000376707 KIF24Q5T7B8 1368 aa29.17■■■□□ 2.26
VSX1-201ENST00000376707 RGPD2P0DJD1 1756 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms