RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 CABP1Q9NZU7 370 aa17.51■□□□□ 0.39
NOTCH4-201ENST00000375023 GNAI2P04899 355 aa17.51■□□□□ 0.39
NOTCH4-201ENST00000375023 UBAP1LF5GYI3 381 aa17.51■□□□□ 0.39
NOTCH4-201ENST00000375023 SERPINC1P01008 464 aa17.51■□□□□ 0.39
NOTCH4-201ENST00000375023 SLC3A2P08195 630 aaKnown RBP17.51■□□□□ 0.39
NOTCH4-201ENST00000375023 TSPY26PQ9H489 355 aa17.51■□□□□ 0.39
NOTCH4-201ENST00000375023 CCDC69A6NI79 296 aa17.5■□□□□ 0.39
NOTCH4-201ENST00000375023 IL1RAPL2Q9NP60 686 aa17.5■□□□□ 0.39
NOTCH4-201ENST00000375023 USP5P45974 858 aa17.5■□□□□ 0.39
NOTCH4-201ENST00000375023 SLC26A8Q96RN1 970 aa17.5■□□□□ 0.39
NOTCH4-201ENST00000375023 PPP2R1AP30153 589 aa17.5■□□□□ 0.39
NOTCH4-201ENST00000375023 PRDM11Q9NQV5 511 aa17.5■□□□□ 0.39
NOTCH4-201ENST00000375023 BRPF3Q9ULD4 1205 aa17.5■□□□□ 0.39
NOTCH4-201ENST00000375023 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
NOTCH4-201ENST00000375023 CWC27Q6UX04 472 aaKnown RBP17.5■□□□□ 0.39
NOTCH4-201ENST00000375023 CENPHQ9H3R5 247 aa17.5■□□□□ 0.39
NOTCH4-201ENST00000375023 ME1P48163 572 aa17.49■□□□□ 0.39
NOTCH4-201ENST00000375023 ARHGAP5Q13017 1502 aa17.49■□□□□ 0.39
NOTCH4-201ENST00000375023 FAM193AP78312 1265 aa17.49■□□□□ 0.39
NOTCH4-201ENST00000375023 AXDND1Q5T1B0 1012 aaPredicted RBP17.49■□□□□ 0.39
NOTCH4-201ENST00000375023 GAS2L2Q8NHY3 880 aa17.49■□□□□ 0.39
NOTCH4-201ENST00000375023 MPHOSPH8Q99549 860 aa17.49■□□□□ 0.39
NOTCH4-201ENST00000375023 ZNF530Q6P9A1 599 aaPredicted RBP17.49■□□□□ 0.39
NOTCH4-201ENST00000375023 H0YHG0 523 aa17.49■□□□□ 0.39
NOTCH4-201ENST00000375023 BIN2Q9UBW5 565 aaPredicted RBP17.49■□□□□ 0.39
NOTCH4-201ENST00000375023 CCDC39Q9UFE4 941 aa17.49■□□□□ 0.39
NOTCH4-201ENST00000375023 AACSQ86V21 672 aa17.48■□□□□ 0.39
NOTCH4-201ENST00000375023 GNAI3P08754 354 aa17.48■□□□□ 0.39
NOTCH4-201ENST00000375023 TXLNAP40222 546 aa17.48■□□□□ 0.39
NOTCH4-201ENST00000375023 ZNF622Q969S3 477 aaKnown RBP eCLIP17.48■□□□□ 0.39
NOTCH4-201ENST00000375023 CDR1P51861 262 aa17.47■□□□□ 0.39
NOTCH4-201ENST00000375023 FILIP1LQ4L180 1135 aa17.47■□□□□ 0.39
NOTCH4-201ENST00000375023 PSMD1Q99460 953 aa17.47■□□□□ 0.39
NOTCH4-201ENST00000375023 DEF6Q9H4E7 631 aa17.47■□□□□ 0.39
NOTCH4-201ENST00000375023 CCDC57Q2TAC2 916 aa17.46■□□□□ 0.39
NOTCH4-201ENST00000375023 RAI14Q9P0K7 980 aa17.46■□□□□ 0.39
NOTCH4-201ENST00000375023 SMG6Q86US8 1419 aaKnown RBP17.46■□□□□ 0.39
NOTCH4-201ENST00000375023 NUTM1Q86Y26 1132 aa17.46■□□□□ 0.38
NOTCH4-201ENST00000375023 SLC4A8Q2Y0W8 1093 aa17.45■□□□□ 0.38
NOTCH4-201ENST00000375023 ACBD3Q9H3P7 528 aa17.45■□□□□ 0.38
NOTCH4-201ENST00000375023 GNL3LQ9NVN8 582 aaKnown RBP17.45■□□□□ 0.38
NOTCH4-201ENST00000375023 DDX11Q96FC9 970 aa17.45■□□□□ 0.38
NOTCH4-201ENST00000375023 AKNAQ7Z591 1439 aa17.45■□□□□ 0.38
NOTCH4-201ENST00000375023 SMARCE1Q969G3 411 aa17.45■□□□□ 0.38
NOTCH4-201ENST00000375023 BTBD11A6QL63 1104 aa17.45■□□□□ 0.38
NOTCH4-201ENST00000375023 TDO2P48775 406 aa17.45■□□□□ 0.38
NOTCH4-201ENST00000375023 LRRCC1Q9C099 1032 aa17.45■□□□□ 0.38
NOTCH4-201ENST00000375023 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.44■□□□□ 0.38
NOTCH4-201ENST00000375023 ZPR1O75312 459 aa17.44■□□□□ 0.38
NOTCH4-201ENST00000375023 TSPYL1Q9H0U9 437 aa17.44■□□□□ 0.38
NOTCH4-201ENST00000375023 CYP46A1Q9Y6A2 500 aa17.44■□□□□ 0.38
NOTCH4-201ENST00000375023 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.38
NOTCH4-201ENST00000375023 USHBP1Q8N6Y0 703 aa17.44■□□□□ 0.38
NOTCH4-201ENST00000375023 NEBLO76041 1014 aa17.43■□□□□ 0.38
NOTCH4-201ENST00000375023 DHX8Q14562 1220 aaKnown RBP17.43■□□□□ 0.38
NOTCH4-201ENST00000375023 EP400NLQ6ZTU2 488 aa17.43■□□□□ 0.38
NOTCH4-201ENST00000375023 ZNF396Q96N95 335 aaPredicted RBP17.43■□□□□ 0.38
NOTCH4-201ENST00000375023 TAX1BP1Q86VP1 789 aa17.43■□□□□ 0.38
NOTCH4-201ENST00000375023 TNMDQ9H2S6 317 aa17.43■□□□□ 0.38
NOTCH4-201ENST00000375023 ABCF2Q9UG63 623 aa17.43■□□□□ 0.38
NOTCH4-201ENST00000375023 IDH1O75874 414 aaKnown RBP17.43■□□□□ 0.38
NOTCH4-201ENST00000375023 PTCD1O75127 700 aaKnown RBP17.43■□□□□ 0.38
NOTCH4-201ENST00000375023 SKAP1Q86WV1 359 aa17.43■□□□□ 0.38
NOTCH4-201ENST00000375023 C8orf37Q96NL8 207 aa17.43■□□□□ 0.38
NOTCH4-201ENST00000375023 SSR1P43307 286 aaKnown RBP17.42■□□□□ 0.38
NOTCH4-201ENST00000375023 THUMPD2Q9BTF0 503 aaKnown RBP17.42■□□□□ 0.38
NOTCH4-201ENST00000375023 ENOX2Q16206 610 aaKnown RBP17.42■□□□□ 0.38
NOTCH4-201ENST00000375023 NOM1Q5C9Z4 860 aaKnown RBP17.42■□□□□ 0.38
NOTCH4-201ENST00000375023 FANCIQ9NVI1 1328 aa17.42■□□□□ 0.38
NOTCH4-201ENST00000375023 SRGAP3O43295 1099 aa17.42■□□□□ 0.38
NOTCH4-201ENST00000375023 ZNF76P36508 570 aa17.42■□□□□ 0.38
NOTCH4-201ENST00000375023 CAMK4Q16566 473 aa17.42■□□□□ 0.38
NOTCH4-201ENST00000375023 SMARCA5O60264 1052 aaPredicted RBP17.41■□□□□ 0.38
NOTCH4-201ENST00000375023 SOGA3Q5TF21 947 aa17.41■□□□□ 0.38
NOTCH4-201ENST00000375023 JAKMIP1Q96N16 626 aaKnown RBP17.41■□□□□ 0.38
NOTCH4-201ENST00000375023 LIG1P18858 919 aa17.41■□□□□ 0.38
NOTCH4-201ENST00000375023 ZNF408Q9H9D4 720 aa17.41■□□□□ 0.38
NOTCH4-201ENST00000375023 DCTN1Q14203 1278 aa17.41■□□□□ 0.38
NOTCH4-201ENST00000375023 LRP2BPQ9P2M1 347 aa17.41■□□□□ 0.38
NOTCH4-201ENST00000375023 ANKIB1Q9P2G1 1089 aa17.41■□□□□ 0.38
NOTCH4-201ENST00000375023 MYOM3Q5VTT5 1437 aa17.41■□□□□ 0.38
NOTCH4-201ENST00000375023 LARP6Q9BRS8 491 aaKnown RBP17.4■□□□□ 0.38
NOTCH4-201ENST00000375023 LARP1BQ659C4 914 aaKnown RBP17.4■□□□□ 0.38
NOTCH4-201ENST00000375023 CCDC82Q8N4S0 544 aa17.4■□□□□ 0.38
NOTCH4-201ENST00000375023 CCDC181Q5TID7 509 aa17.4■□□□□ 0.38
NOTCH4-201ENST00000375023 TMX1Q9H3N1 280 aa17.4■□□□□ 0.38
NOTCH4-201ENST00000375023 GAPVD1Q14C86 1478 aa17.39■□□□□ 0.38
NOTCH4-201ENST00000375023 MRE11P49959 708 aa17.39■□□□□ 0.37
NOTCH4-201ENST00000375023 ERC1Q8IUD2 1116 aa17.39■□□□□ 0.37
NOTCH4-201ENST00000375023 TRIM22Q8IYM9 498 aa17.39■□□□□ 0.37
NOTCH4-201ENST00000375023 PPFIBP1Q86W92 1011 aa17.39■□□□□ 0.37
NOTCH4-201ENST00000375023 ANKRD50Q9ULJ7 1429 aa17.39■□□□□ 0.37
NOTCH4-201ENST00000375023 CALRP27797 417 aaKnown RBP17.39■□□□□ 0.37
NOTCH4-201ENST00000375023 SEPT7Q16181 437 aaKnown RBP17.39■□□□□ 0.37
NOTCH4-201ENST00000375023 IL27Q8NEV9 243 aa17.39■□□□□ 0.37
NOTCH4-201ENST00000375023 NACAP1Q9BZK3 213 aa17.39■□□□□ 0.37
NOTCH4-201ENST00000375023 SRCIN1Q9C0H9 1055 aa17.39■□□□□ 0.37
NOTCH4-201ENST00000375023 CT47B1P0C2W7 299 aaPredicted RBP17.38■□□□□ 0.37
NOTCH4-201ENST00000375023 RFX1P22670 979 aa17.38■□□□□ 0.37
NOTCH4-201ENST00000375023 TAF3Q5VWG9 929 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms