RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 HSP90B2PQ58FF3 399 aa14.79□□□□□ -0.04
NPLOC4-202ENST00000374747 PANK1Q8TE04 598 aa14.79□□□□□ -0.04
NPLOC4-202ENST00000374747 AK7Q96M32 723 aa14.79□□□□□ -0.04
NPLOC4-202ENST00000374747 C20orf194Q5TEA3 1177 aa14.79□□□□□ -0.04
NPLOC4-202ENST00000374747 CCDC30Q5VVM6 783 aa14.79□□□□□ -0.04
NPLOC4-202ENST00000374747 AMOTL2Q9Y2J4 779 aa14.79□□□□□ -0.04
NPLOC4-202ENST00000374747 CDR1P51861 262 aa14.79□□□□□ -0.04
NPLOC4-202ENST00000374747 SYTL4Q96C24 671 aaPredicted RBP14.79□□□□□ -0.04
NPLOC4-202ENST00000374747 LNPKQ9C0E8 428 aa14.78□□□□□ -0.04
NPLOC4-202ENST00000374747 NINLQ9Y2I6 1382 aa14.78□□□□□ -0.04
NPLOC4-202ENST00000374747 TATP17735 454 aaPredicted RBP14.78□□□□□ -0.04
NPLOC4-202ENST00000374747 PDE3AQ14432 1141 aa14.78□□□□□ -0.04
NPLOC4-202ENST00000374747 TWISTNBQ3B726 338 aaPredicted RBP14.77□□□□□ -0.04
NPLOC4-202ENST00000374747 HSP90AB4PQ58FF6 505 aa14.77□□□□□ -0.04
NPLOC4-202ENST00000374747 MEX3CQ5U5Q3 659 aaKnown RBP14.77□□□□□ -0.05
NPLOC4-202ENST00000374747 TRAK2O60296 914 aa14.77□□□□□ -0.05
NPLOC4-202ENST00000374747 RRS1Q15050 365 aaKnown RBP14.77□□□□□ -0.05
NPLOC4-202ENST00000374747 CDC45O75419 566 aa14.76□□□□□ -0.05
NPLOC4-202ENST00000374747 TRDNQ13061 729 aa14.76□□□□□ -0.05
NPLOC4-202ENST00000374747 KCNH5Q8NCM2 988 aa14.76□□□□□ -0.05
NPLOC4-202ENST00000374747 NSD2O96028 1365 aa14.76□□□□□ -0.05
NPLOC4-202ENST00000374747 PRAG1Q86YV5 1406 aa14.76□□□□□ -0.05
NPLOC4-202ENST00000374747 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.76□□□□□ -0.05
NPLOC4-202ENST00000374747 UHRF1BP1LA0JNW5 1464 aa14.75□□□□□ -0.05
NPLOC4-202ENST00000374747 NAT10Q9H0A0 1025 aaKnown RBP14.75□□□□□ -0.05
NPLOC4-202ENST00000374747 CALRP27797 417 aaKnown RBP14.75□□□□□ -0.05
NPLOC4-202ENST00000374747 CDC42BPAQ5VT25 1732 aa14.75□□□□□ -0.05
NPLOC4-202ENST00000374747 RIC3Q7Z5B4 369 aa14.75□□□□□ -0.05
NPLOC4-202ENST00000374747 PARD3Q8TEW0 1356 aa14.75□□□□□ -0.05
NPLOC4-202ENST00000374747 MBD3O95983 291 aa14.74□□□□□ -0.05
NPLOC4-202ENST00000374747 G3BP1Q13283 466 aaKnown RBP eCLIP14.74□□□□□ -0.05
NPLOC4-202ENST00000374747 CWC15Q9P013 229 aaKnown RBP14.74□□□□□ -0.05
NPLOC4-202ENST00000374747 CCDC66A2RUB6 948 aa14.74□□□□□ -0.05
NPLOC4-202ENST00000374747 ERC2O15083 957 aa14.74□□□□□ -0.05
NPLOC4-202ENST00000374747 RNF214Q8ND24 703 aa14.74□□□□□ -0.05
NPLOC4-202ENST00000374747 TSR2Q969E8 191 aaKnown RBP14.74□□□□□ -0.05
NPLOC4-202ENST00000374747 FBXW7Q969H0 707 aa14.74□□□□□ -0.05
NPLOC4-202ENST00000374747 LETM1O95202 739 aaPredicted RBP14.73□□□□□ -0.05
NPLOC4-202ENST00000374747 APPP05067 770 aa14.73□□□□□ -0.05
NPLOC4-202ENST00000374747 GNAI3P08754 354 aa14.73□□□□□ -0.05
NPLOC4-202ENST00000374747 RRP12Q5JTH9 1297 aaKnown RBP14.73□□□□□ -0.05
NPLOC4-202ENST00000374747 AMOTL1Q8IY63 956 aa14.73□□□□□ -0.05
NPLOC4-202ENST00000374747 UBTFL1P0CB47 393 aaPredicted RBP14.73□□□□□ -0.05
NPLOC4-202ENST00000374747 NFE2L2Q16236 605 aa14.73□□□□□ -0.05
NPLOC4-202ENST00000374747 ZNF530Q6P9A1 599 aaPredicted RBP14.73□□□□□ -0.05
NPLOC4-202ENST00000374747 BRPF3Q9ULD4 1205 aa14.73□□□□□ -0.05
NPLOC4-202ENST00000374747 ABCA8O94911 1581 aa14.73□□□□□ -0.05
NPLOC4-202ENST00000374747 HMGN5P82970 282 aaKnown RBP14.73□□□□□ -0.05
NPLOC4-202ENST00000374747 ZNF428Q96B54 188 aa14.72□□□□□ -0.05
NPLOC4-202ENST00000374747 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.72□□□□□ -0.05
NPLOC4-202ENST00000374747 SPG7Q9UQ90 795 aa14.72□□□□□ -0.05
NPLOC4-202ENST00000374747 CCDC173Q0VFZ6 552 aa14.72□□□□□ -0.05
NPLOC4-202ENST00000374747 ANO8Q9HCE9 1232 aaPredicted RBP14.72□□□□□ -0.05
NPLOC4-202ENST00000374747 SAFBQ15424 915 aaKnown RBP eCLIP14.72□□□□□ -0.05
NPLOC4-202ENST00000374747 CAVIN1Q6NZI2 390 aaKnown RBP14.72□□□□□ -0.05
NPLOC4-202ENST00000374747 TMPOP42166 694 aaKnown RBP14.71□□□□□ -0.05
NPLOC4-202ENST00000374747 NFXL1Q6ZNB6 911 aa14.71□□□□□ -0.05
NPLOC4-202ENST00000374747 PHF8Q9UPP1 1060 aa14.71□□□□□ -0.05
NPLOC4-202ENST00000374747 ARHGEF12Q9NZN5 1544 aa14.71□□□□□ -0.05
NPLOC4-202ENST00000374747 EIF2AK4Q9P2K8 1649 aaKnown RBP14.71□□□□□ -0.05
NPLOC4-202ENST00000374747 WWC1Q8IX03 1113 aa14.71□□□□□ -0.05
NPLOC4-202ENST00000374747 AIMP1Q12904 312 aaKnown RBP14.71□□□□□ -0.06
NPLOC4-202ENST00000374747 ERCC4Q92889 916 aaPredicted RBP14.71□□□□□ -0.06
NPLOC4-202ENST00000374747 OLFM4Q6UX06 510 aa14.7□□□□□ -0.06
NPLOC4-202ENST00000374747 NME9Q86XW9 330 aa14.7□□□□□ -0.06
NPLOC4-202ENST00000374747 PRDM11Q9NQV5 511 aa14.7□□□□□ -0.06
NPLOC4-202ENST00000374747 STRN4Q9NRL3 753 aa14.7□□□□□ -0.06
NPLOC4-202ENST00000374747 SLFN5Q08AF3 891 aa14.7□□□□□ -0.06
NPLOC4-202ENST00000374747 TOM1L2Q6ZVM7 507 aa14.7□□□□□ -0.06
NPLOC4-202ENST00000374747 NAP1L1P55209 391 aaKnown RBP14.7□□□□□ -0.06
NPLOC4-202ENST00000374747 NOL10Q9BSC4 688 aaKnown RBP14.7□□□□□ -0.06
NPLOC4-202ENST00000374747 ERICH2A1L162 156 aa14.69□□□□□ -0.06
NPLOC4-202ENST00000374747 TRIM5Q9C035 493 aa14.69□□□□□ -0.06
NPLOC4-202ENST00000374747 TSPY26PQ9H489 355 aa14.69□□□□□ -0.06
NPLOC4-202ENST00000374747 POLR1AO95602 1720 aaPredicted RBP14.69□□□□□ -0.06
NPLOC4-202ENST00000374747 ATP7AQ04656 1500 aa14.69□□□□□ -0.06
NPLOC4-202ENST00000374747 BCAR3O75815 825 aa14.69□□□□□ -0.06
NPLOC4-202ENST00000374747 SDF4Q9BRK5 362 aa14.69□□□□□ -0.06
NPLOC4-202ENST00000374747 NOB1Q9ULX3 412 aaKnown RBP14.69□□□□□ -0.06
NPLOC4-202ENST00000374747 RIMS2Q9UQ26 1411 aa14.69□□□□□ -0.06
NPLOC4-202ENST00000374747 ADGBQ8N7X0 1667 aa14.69□□□□□ -0.06
NPLOC4-202ENST00000374747 HDGFL1Q5TGJ6 251 aa14.69□□□□□ -0.06
NPLOC4-202ENST00000374747 ABCC11Q96J66 1382 aa14.68□□□□□ -0.06
NPLOC4-202ENST00000374747 FOSBP53539 338 aa14.68□□□□□ -0.06
NPLOC4-202ENST00000374747 SLC4A2P04920 1241 aa14.68□□□□□ -0.06
NPLOC4-202ENST00000374747 XPCQ01831 940 aaPredicted RBP14.68□□□□□ -0.06
NPLOC4-202ENST00000374747 H0YHG0 523 aa14.67□□□□□ -0.06
NPLOC4-202ENST00000374747 TCEAL9Q9UHQ7 104 aa14.67□□□□□ -0.06
NPLOC4-202ENST00000374747 PDILTQ8N807 584 aa14.67□□□□□ -0.06
NPLOC4-202ENST00000374747 PSMA5P28066 241 aa14.67□□□□□ -0.06
NPLOC4-202ENST00000374747 MCM2P49736 904 aa14.67□□□□□ -0.06
NPLOC4-202ENST00000374747 ATF7IPQ6VMQ6 1270 aa14.67□□□□□ -0.06
NPLOC4-202ENST00000374747 RALYLQ86SE5 291 aaKnown RBP14.67□□□□□ -0.06
NPLOC4-202ENST00000374747 KDM5DQ9BY66 1539 aa14.67□□□□□ -0.06
NPLOC4-202ENST00000374747 BACH2Q9BYV9 841 aa14.67□□□□□ -0.06
NPLOC4-202ENST00000374747 SPINK5Q9NQ38 1064 aaPredicted RBP14.67□□□□□ -0.06
NPLOC4-202ENST00000374747 CCP110O43303 1012 aa14.67□□□□□ -0.06
NPLOC4-202ENST00000374747 DCTN1Q14203 1278 aa14.67□□□□□ -0.06
NPLOC4-202ENST00000374747 PUS7Q96PZ0 661 aaKnown RBP14.66□□□□□ -0.06
NPLOC4-202ENST00000374747 BCL11BQ9C0K0 894 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms