RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 GOLGA2Q08379 1002 aa19.14■□□□□ 0.65
UBXN11-204ENST00000374217 KRT28Q7Z3Y7 464 aa19.14■□□□□ 0.65
UBXN11-204ENST00000374217 ABTB2Q8N961 1025 aa19.14■□□□□ 0.65
UBXN11-204ENST00000374217 SSH2Q76I76 1423 aa19.14■□□□□ 0.65
UBXN11-204ENST00000374217 ANKRD26Q9UPS8 1709 aa19.14■□□□□ 0.65
UBXN11-204ENST00000374217 FRAT2O75474 233 aaPredicted RBP19.14■□□□□ 0.65
UBXN11-204ENST00000374217 MAPK8IP3Q9UPT6 1336 aa19.13■□□□□ 0.65
UBXN11-204ENST00000374217 BRINP3Q76B58 766 aa19.13■□□□□ 0.65
UBXN11-204ENST00000374217 ZRANB1Q9UGI0 708 aa19.13■□□□□ 0.65
UBXN11-204ENST00000374217 NPHP3Q7Z494 1330 aa19.13■□□□□ 0.65
UBXN11-204ENST00000374217 C20orf194Q5TEA3 1177 aa19.12■□□□□ 0.65
UBXN11-204ENST00000374217 NLRP6P59044 892 aa19.11■□□□□ 0.65
UBXN11-204ENST00000374217 AAMPQ13685 434 aa19.11■□□□□ 0.65
UBXN11-204ENST00000374217 LMOD2Q6P5Q4 547 aa19.11■□□□□ 0.65
UBXN11-204ENST00000374217 IQSEC2Q5JU85 1478 aa19.11■□□□□ 0.65
UBXN11-204ENST00000374217 TRMT2AQ8IZ69 625 aaKnown RBP19.11■□□□□ 0.65
UBXN11-204ENST00000374217 SLC4A3P48751 1232 aa19.1■□□□□ 0.65
UBXN11-204ENST00000374217 WDR43Q15061 677 aaKnown RBP eCLIP19.1■□□□□ 0.65
UBXN11-204ENST00000374217 NUTM2GQ5VZR2 741 aa19.09■□□□□ 0.65
UBXN11-204ENST00000374217 DDX17Q92841 729 aaKnown RBP19.09■□□□□ 0.65
UBXN11-204ENST00000374217 MTHFSP49914 203 aa19.08■□□□□ 0.64
UBXN11-204ENST00000374217 SLFN5Q08AF3 891 aa19.08■□□□□ 0.64
UBXN11-204ENST00000374217 CFAP53Q96M91 514 aa19.08■□□□□ 0.64
UBXN11-204ENST00000374217 ADAMTS8Q9UP79 889 aa19.08■□□□□ 0.64
UBXN11-204ENST00000374217 TOM1O60784 492 aa19.07■□□□□ 0.64
UBXN11-204ENST00000374217 USP31Q70CQ4 1352 aa19.07■□□□□ 0.64
UBXN11-204ENST00000374217 PIK3C2AO00443 1686 aa19.06■□□□□ 0.64
UBXN11-204ENST00000374217 OVOS2A0A0J9YW53 1432 aa19.06■□□□□ 0.64
UBXN11-204ENST00000374217 OVOS2Q6IE36 1432 aa19.06■□□□□ 0.64
UBXN11-204ENST00000374217 SOX12O15370 315 aa19.06■□□□□ 0.64
UBXN11-204ENST00000374217 EIF5BO60841 1220 aaKnown RBP19.05■□□□□ 0.64
UBXN11-204ENST00000374217 PDE3AQ14432 1141 aa19.05■□□□□ 0.64
UBXN11-204ENST00000374217 SKAP1Q86WV1 359 aa19.04■□□□□ 0.64
UBXN11-204ENST00000374217 SBNO1A3KN83 1393 aa19.03■□□□□ 0.64
UBXN11-204ENST00000374217 FBLN1P23142 703 aa19.03■□□□□ 0.64
UBXN11-204ENST00000374217 AATKQ6ZMQ8 1374 aa19.03■□□□□ 0.64
UBXN11-204ENST00000374217 USP19O94966 1318 aa19.03■□□□□ 0.64
UBXN11-204ENST00000374217 PLEKHG5O94827 1062 aa19.02■□□□□ 0.64
UBXN11-204ENST00000374217 TRPM3Q9HCF6 1732 aaPredicted RBP19.02■□□□□ 0.64
UBXN11-204ENST00000374217 GLIPR1L2Q4G1C9 344 aa19.02■□□□□ 0.63
UBXN11-204ENST00000374217 POLKQ9UBT6 870 aa19.02■□□□□ 0.63
UBXN11-204ENST00000374217 PXDNQ92626 1479 aa19.01■□□□□ 0.63
UBXN11-204ENST00000374217 E9PSI1 815 aa19.01■□□□□ 0.63
UBXN11-204ENST00000374217 UBAP1LF5GYI3 381 aa19.01■□□□□ 0.63
UBXN11-204ENST00000374217 RRS1Q15050 365 aaKnown RBP19.01■□□□□ 0.63
UBXN11-204ENST00000374217 PIP4K2BP78356 416 aa19■□□□□ 0.63
UBXN11-204ENST00000374217 KCNH5Q8NCM2 988 aa19■□□□□ 0.63
UBXN11-204ENST00000374217 TNS3Q68CZ2 1445 aa19■□□□□ 0.63
UBXN11-204ENST00000374217 RGS3P49796 1198 aa19■□□□□ 0.63
UBXN11-204ENST00000374217 EMILIN1Q9Y6C2 1016 aa19■□□□□ 0.63
UBXN11-204ENST00000374217 SOS2Q07890 1332 aaPredicted RBP18.99■□□□□ 0.63
UBXN11-204ENST00000374217 SPATA31A3Q5VYP0 1347 aa18.99■□□□□ 0.63
UBXN11-204ENST00000374217 MAP2P11137 1827 aaKnown RBP18.99■□□□□ 0.63
UBXN11-204ENST00000374217 ROBO1Q9Y6N7 1651 aa18.99■□□□□ 0.63
UBXN11-204ENST00000374217 ARHGEF10O15013 1369 aa18.99■□□□□ 0.63
UBXN11-204ENST00000374217 UPF2Q9HAU5 1272 aaKnown RBP18.98■□□□□ 0.63
UBXN11-204ENST00000374217 USP54Q70EL1 1684 aa18.97■□□□□ 0.63
UBXN11-204ENST00000374217 AMPHP49418 695 aa18.96■□□□□ 0.63
UBXN11-204ENST00000374217 ANTXR1Q9H6X2 564 aa18.96■□□□□ 0.63
UBXN11-204ENST00000374217 ISY1Q9ULR0 285 aaKnown RBP18.96■□□□□ 0.63
UBXN11-204ENST00000374217 NHSL1Q5SYE7 1610 aa18.96■□□□□ 0.63
UBXN11-204ENST00000374217 ALS2Q96Q42 1657 aa18.96■□□□□ 0.63
UBXN11-204ENST00000374217 ZBTB7CA1YPR0 619 aa18.95■□□□□ 0.62
UBXN11-204ENST00000374217 DIAPH1O60610 1272 aaKnown RBP18.95■□□□□ 0.62
UBXN11-204ENST00000374217 GCP02774 474 aa18.95■□□□□ 0.62
UBXN11-204ENST00000374217 MARF1Q9Y4F3 1742 aaKnown RBP18.95■□□□□ 0.62
UBXN11-204ENST00000374217 MAP3K19Q56UN5 1328 aa18.94■□□□□ 0.62
UBXN11-204ENST00000374217 CLUAP1Q96AJ1 413 aa18.94■□□□□ 0.62
UBXN11-204ENST00000374217 LRRC59Q96AG4 307 aaKnown RBP18.93■□□□□ 0.62
UBXN11-204ENST00000374217 CDK12Q9NYV4 1490 aaPredicted RBP18.93■□□□□ 0.62
UBXN11-204ENST00000374217 U2SURPO15042 1029 aaKnown RBP18.93■□□□□ 0.62
UBXN11-204ENST00000374217 HAP1P54257 671 aaPredicted RBP18.93■□□□□ 0.62
UBXN11-204ENST00000374217 PNPLA6Q8IY17 1366 aa18.92■□□□□ 0.62
UBXN11-204ENST00000374217 FSD2A1L4K1 749 aa18.92■□□□□ 0.62
UBXN11-204ENST00000374217 MED1Q15648 1581 aaPredicted RBP18.91■□□□□ 0.62
UBXN11-204ENST00000374217 CLCN1P35523 988 aa18.91■□□□□ 0.62
UBXN11-204ENST00000374217 CABLES1Q8TDN4 633 aa18.91■□□□□ 0.62
UBXN11-204ENST00000374217 SLIT3O75094 1523 aa18.91■□□□□ 0.62
UBXN11-204ENST00000374217 AHDC1Q5TGY3 1603 aaPredicted RBP18.91■□□□□ 0.62
UBXN11-204ENST00000374217 U2AF1L5P0DN76 240 aaPredicted RBP18.9■□□□□ 0.62
UBXN11-204ENST00000374217 U2AF1Q01081 240 aaKnown RBP eCLIP18.9■□□□□ 0.62
UBXN11-204ENST00000374217 TBC1D32Q96NH3 1257 aa18.9■□□□□ 0.62
UBXN11-204ENST00000374217 FLT4P35916 1363 aa18.9■□□□□ 0.62
UBXN11-204ENST00000374217 GOLGA6L3A6NEY3 463 aa18.9■□□□□ 0.62
UBXN11-204ENST00000374217 KIF24Q5T7B8 1368 aa18.9■□□□□ 0.62
UBXN11-204ENST00000374217 HSP90AB2PQ58FF8 381 aa18.89■□□□□ 0.61
UBXN11-204ENST00000374217 NFAT5O94916 1531 aa18.88■□□□□ 0.61
UBXN11-204ENST00000374217 COL3A1P02461 1466 aaPredicted RBP18.88■□□□□ 0.61
UBXN11-204ENST00000374217 ZC3H6P61129 1189 aaKnown RBP18.88■□□□□ 0.61
UBXN11-204ENST00000374217 RRAGDQ9NQL2 400 aaPredicted RBP18.88■□□□□ 0.61
UBXN11-204ENST00000374217 IGHDP01880 384 aa18.88■□□□□ 0.61
UBXN11-204ENST00000374217 HOXC9P31274 260 aa18.87■□□□□ 0.61
UBXN11-204ENST00000374217 PHLPP1O60346 1717 aa18.87■□□□□ 0.61
UBXN11-204ENST00000374217 SHPRHQ149N8 1683 aa18.87■□□□□ 0.61
UBXN11-204ENST00000374217 RTL1A6NKG5 1358 aa18.86■□□□□ 0.61
UBXN11-204ENST00000374217 LTN1O94822 1766 aa18.86■□□□□ 0.61
UBXN11-204ENST00000374217 ARHGEF25Q86VW2 580 aa18.86■□□□□ 0.61
UBXN11-204ENST00000374217 PEAK1Q9H792 1746 aa18.86■□□□□ 0.61
UBXN11-204ENST00000374217 IL13P35225 146 aa18.86■□□□□ 0.61
UBXN11-204ENST00000374217 NCBP3Q53F19 620 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms