RNA–Protein interactions for RNA: ENST00000373647.8

RABGAP1-202, Transcript of RAB GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGAP1, Length 4,997 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-202ENST00000373647 MSH6P52701 1360 aa12.97□□□□□ -0.33
RABGAP1-202ENST00000373647 CRB1P82279 1406 aa12.96□□□□□ -0.33
RABGAP1-202ENST00000373647 CICQ96RK0 1608 aaPredicted RBP12.96□□□□□ -0.33
RABGAP1-202ENST00000373647 FLT4P35916 1363 aa12.96□□□□□ -0.33
RABGAP1-202ENST00000373647 ZNF853P0CG23 659 aa12.96□□□□□ -0.34
RABGAP1-202ENST00000373647 MRC1P22897 1456 aa12.96□□□□□ -0.34
RABGAP1-202ENST00000373647 NWD2Q9ULI1 1742 aa12.95□□□□□ -0.34
RABGAP1-202ENST00000373647 EIF4A2Q14240 407 aaKnown RBP12.95□□□□□ -0.34
RABGAP1-202ENST00000373647 SUPT16HQ9Y5B9 1047 aaKnown RBP12.95□□□□□ -0.34
RABGAP1-202ENST00000373647 RUNDC1Q96C34 613 aa12.95□□□□□ -0.34
RABGAP1-202ENST00000373647 PMFBP1Q8TBY8 1022 aa12.94□□□□□ -0.34
RABGAP1-202ENST00000373647 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.94□□□□□ -0.34
RABGAP1-202ENST00000373647 PHACTR3Q96KR7 559 aa12.94□□□□□ -0.34
RABGAP1-202ENST00000373647 FCHSD2O94868 740 aa12.93□□□□□ -0.34
RABGAP1-202ENST00000373647 C5P01031 1676 aa12.93□□□□□ -0.34
RABGAP1-202ENST00000373647 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.93□□□□□ -0.34
RABGAP1-202ENST00000373647 COL14A1Q05707 1796 aaKnown RBP12.92□□□□□ -0.34
RABGAP1-202ENST00000373647 APAF1O14727 1248 aa12.92□□□□□ -0.34
RABGAP1-202ENST00000373647 BRINP3Q76B58 766 aa12.92□□□□□ -0.34
RABGAP1-202ENST00000373647 ARHGEF25Q86VW2 580 aa12.92□□□□□ -0.34
RABGAP1-202ENST00000373647 TCP11L2Q8N4U5 519 aa12.92□□□□□ -0.34
RABGAP1-202ENST00000373647 PHLPP1O60346 1717 aa12.92□□□□□ -0.34
RABGAP1-202ENST00000373647 IL16Q14005 1332 aa12.91□□□□□ -0.34
RABGAP1-202ENST00000373647 RRS1Q15050 365 aaKnown RBP12.91□□□□□ -0.34
RABGAP1-202ENST00000373647 PLPPR3Q6T4P5 718 aa12.91□□□□□ -0.34
RABGAP1-202ENST00000373647 WDR63Q8IWG1 891 aa12.91□□□□□ -0.34
RABGAP1-202ENST00000373647 SPATA31A3Q5VYP0 1347 aa12.91□□□□□ -0.34
RABGAP1-202ENST00000373647 HSP90AB2PQ58FF8 381 aa12.91□□□□□ -0.34
RABGAP1-202ENST00000373647 OVOS2A0A0G2JMS6 1433 aa12.91□□□□□ -0.34
RABGAP1-202ENST00000373647 TUBGCP6Q96RT7 1819 aa12.9□□□□□ -0.34
RABGAP1-202ENST00000373647 CEMIPQ8WUJ3 1361 aa12.9□□□□□ -0.34
RABGAP1-202ENST00000373647 HOXC9P31274 260 aa12.9□□□□□ -0.34
RABGAP1-202ENST00000373647 TMPOP42166 694 aaKnown RBP12.9□□□□□ -0.34
RABGAP1-202ENST00000373647 LAMB4A4D0S4 1761 aa12.89□□□□□ -0.35
RABGAP1-202ENST00000373647 COG3Q96JB2 828 aa12.89□□□□□ -0.35
RABGAP1-202ENST00000373647 ITGB4P16144 1822 aa12.89□□□□□ -0.35
RABGAP1-202ENST00000373647 DIAPH1O60610 1272 aaKnown RBP12.88□□□□□ -0.35
RABGAP1-202ENST00000373647 CCDC146Q8IYE0 955 aa12.88□□□□□ -0.35
RABGAP1-202ENST00000373647 RGS12O14924 1447 aa12.87□□□□□ -0.35
RABGAP1-202ENST00000373647 NUTM2FA1L443 756 aa12.87□□□□□ -0.35
RABGAP1-202ENST00000373647 ERICH6BQ5W0A0 696 aa12.87□□□□□ -0.35
RABGAP1-202ENST00000373647 PROSER2Q86WR7 435 aaPredicted RBP12.87□□□□□ -0.35
RABGAP1-202ENST00000373647 AXIN2Q9Y2T1 843 aa12.87□□□□□ -0.35
RABGAP1-202ENST00000373647 TNNT2P45379 298 aaPredicted RBP12.87□□□□□ -0.35
RABGAP1-202ENST00000373647 BRPF1P55201 1214 aaPredicted RBP12.86□□□□□ -0.35
RABGAP1-202ENST00000373647 ZNF831Q5JPB2 1677 aa12.86□□□□□ -0.35
RABGAP1-202ENST00000373647 HEG1Q9ULI3 1381 aa12.86□□□□□ -0.35
RABGAP1-202ENST00000373647 RREB1Q92766 1687 aa12.86□□□□□ -0.35
RABGAP1-202ENST00000373647 COL5A2P05997 1499 aaPredicted RBP12.86□□□□□ -0.35
RABGAP1-202ENST00000373647 IP6K1Q92551 441 aa12.86□□□□□ -0.35
RABGAP1-202ENST00000373647 LRP6O75581 1613 aa12.86□□□□□ -0.35
RABGAP1-202ENST00000373647 CADPS2Q86UW7 1296 aa12.86□□□□□ -0.35
RABGAP1-202ENST00000373647 AEBP1Q8IUX7 1158 aa12.85□□□□□ -0.35
RABGAP1-202ENST00000373647 EP400Q96L91 3159 aa12.85□□□□□ -0.35
RABGAP1-202ENST00000373647 EYA1Q99502 592 aa12.85□□□□□ -0.35
RABGAP1-202ENST00000373647 CNGB1Q14028 1251 aaPredicted RBP12.84□□□□□ -0.35
RABGAP1-202ENST00000373647 BCANQ96GW7 911 aa12.84□□□□□ -0.35
RABGAP1-202ENST00000373647 DISP2A7MBM2 1401 aa12.83□□□□□ -0.35
RABGAP1-202ENST00000373647 MEGF6O75095 1541 aa12.83□□□□□ -0.36
RABGAP1-202ENST00000373647 GOLGA2Q08379 1002 aa12.83□□□□□ -0.36
RABGAP1-202ENST00000373647 GCP02774 474 aa12.83□□□□□ -0.36
RABGAP1-202ENST00000373647 WDR43Q15061 677 aaKnown RBP eCLIP12.82□□□□□ -0.36
RABGAP1-202ENST00000373647 FOXO3O43524 673 aa12.82□□□□□ -0.36
RABGAP1-202ENST00000373647 NUP188Q5SRE5 1749 aa12.82□□□□□ -0.36
RABGAP1-202ENST00000373647 NFE2L2Q16236 605 aa12.82□□□□□ -0.36
RABGAP1-202ENST00000373647 ESCO1Q5FWF5 840 aa12.82□□□□□ -0.36
RABGAP1-202ENST00000373647 E9PSI1 815 aa12.81□□□□□ -0.36
RABGAP1-202ENST00000373647 KRT28Q7Z3Y7 464 aa12.81□□□□□ -0.36
RABGAP1-202ENST00000373647 DDX17Q92841 729 aaKnown RBP12.81□□□□□ -0.36
RABGAP1-202ENST00000373647 SLAIN2Q9P270 581 aa12.81□□□□□ -0.36
RABGAP1-202ENST00000373647 CFAP53Q96M91 514 aa12.81□□□□□ -0.36
RABGAP1-202ENST00000373647 ERBB3P21860 1342 aa12.81□□□□□ -0.36
RABGAP1-202ENST00000373647 RRP1P56182 461 aaKnown RBP12.8□□□□□ -0.36
RABGAP1-202ENST00000373647 FANCIQ9NVI1 1328 aa12.8□□□□□ -0.36
RABGAP1-202ENST00000373647 PRKAR2BP31323 418 aa12.8□□□□□ -0.36
RABGAP1-202ENST00000373647 NGDNQ8NEJ9 315 aaKnown RBP12.8□□□□□ -0.36
RABGAP1-202ENST00000373647 SENP3-EIF4A1A0A087X0R7 540 aa12.8□□□□□ -0.36
RABGAP1-202ENST00000373647 NPHP3Q7Z494 1330 aa12.79□□□□□ -0.36
RABGAP1-202ENST00000373647 THSD7AQ9UPZ6 1657 aa12.79□□□□□ -0.36
RABGAP1-202ENST00000373647 NLRP6P59044 892 aa12.79□□□□□ -0.36
RABGAP1-202ENST00000373647 ABTB2Q8N961 1025 aa12.79□□□□□ -0.36
RABGAP1-202ENST00000373647 U2AF1L5P0DN76 240 aaPredicted RBP12.78□□□□□ -0.36
RABGAP1-202ENST00000373647 U2AF1Q01081 240 aaKnown RBP eCLIP12.78□□□□□ -0.36
RABGAP1-202ENST00000373647 NBPF6Q5VWK0 638 aa12.78□□□□□ -0.36
RABGAP1-202ENST00000373647 NBPF4Q96M43 638 aa12.78□□□□□ -0.36
RABGAP1-202ENST00000373647 KDM6AO15550 1401 aaPredicted RBP12.78□□□□□ -0.36
RABGAP1-202ENST00000373647 KCNH5Q8NCM2 988 aa12.78□□□□□ -0.36
RABGAP1-202ENST00000373647 SBF2Q86WG5 1849 aa12.78□□□□□ -0.36
RABGAP1-202ENST00000373647 RCAN3Q9UKA8 241 aa12.78□□□□□ -0.36
RABGAP1-202ENST00000373647 CHL1O00533 1208 aa12.77□□□□□ -0.37
RABGAP1-202ENST00000373647 RARSP54136 660 aaKnown RBP12.77□□□□□ -0.37
RABGAP1-202ENST00000373647 KIAA0232Q92628 1395 aa12.77□□□□□ -0.37
RABGAP1-202ENST00000373647 TJP1Q07157 1748 aa12.77□□□□□ -0.37
RABGAP1-202ENST00000373647 C20orf194Q5TEA3 1177 aa12.77□□□□□ -0.37
RABGAP1-202ENST00000373647 KCPQ6ZWJ8 1503 aa12.76□□□□□ -0.37
RABGAP1-202ENST00000373647 SLIT2O94813 1529 aa12.76□□□□□ -0.37
RABGAP1-202ENST00000373647 MTHFSDQ2M296 383 aaKnown RBP12.76□□□□□ -0.37
RABGAP1-202ENST00000373647 COL5A3P25940 1745 aaPredicted RBP12.75□□□□□ -0.37
RABGAP1-202ENST00000373647 CT47B1P0C2W7 299 aaPredicted RBP12.75□□□□□ -0.37
RABGAP1-202ENST00000373647 KDM2BQ8NHM5 1336 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms