RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 KNSTRNQ9Y448 316 aa11.7□□□□□ -0.54
SF3A3-201ENST00000373019 ABCC1P33527 1531 aa11.7□□□□□ -0.54
SF3A3-201ENST00000373019 C9orf84Q5VXU9 1444 aa11.69□□□□□ -0.54
SF3A3-201ENST00000373019 ZFYVE16Q7Z3T8 1539 aa11.69□□□□□ -0.54
SF3A3-201ENST00000373019 NUCB2P80303 420 aa11.69□□□□□ -0.54
SF3A3-201ENST00000373019 TMF1P82094 1093 aa11.69□□□□□ -0.54
SF3A3-201ENST00000373019 CDC42BPBQ9Y5S2 1711 aa11.69□□□□□ -0.54
SF3A3-201ENST00000373019 ADGRL2O95490 1459 aa11.69□□□□□ -0.54
SF3A3-201ENST00000373019 NCBP1Q09161 790 aaKnown RBP11.68□□□□□ -0.54
SF3A3-201ENST00000373019 DDX41Q9UJV9 622 aaKnown RBP11.68□□□□□ -0.54
SF3A3-201ENST00000373019 NGEFQ8N5V2 710 aa11.68□□□□□ -0.54
SF3A3-201ENST00000373019 SAMD9LQ8IVG5 1584 aa11.68□□□□□ -0.54
SF3A3-201ENST00000373019 ATP10AO60312 1499 aa11.68□□□□□ -0.54
SF3A3-201ENST00000373019 CCDC66A2RUB6 948 aa11.67□□□□□ -0.54
SF3A3-201ENST00000373019 NUP155O75694 1391 aa11.67□□□□□ -0.54
SF3A3-201ENST00000373019 KANK1Q14678 1352 aa11.67□□□□□ -0.54
SF3A3-201ENST00000373019 MORC2Q9Y6X9 1032 aaPredicted RBP11.67□□□□□ -0.54
SF3A3-201ENST00000373019 TRIM6-TRIM34B2RNG4 842 aa11.67□□□□□ -0.54
SF3A3-201ENST00000373019 TRIM34Q9BYJ4 488 aa11.67□□□□□ -0.54
SF3A3-201ENST00000373019 PPRC1Q5VV67 1664 aaKnown RBP11.67□□□□□ -0.54
SF3A3-201ENST00000373019 YEATS2Q9ULM3 1422 aa11.67□□□□□ -0.54
SF3A3-201ENST00000373019 ANKRD50Q9ULJ7 1429 aa11.66□□□□□ -0.54
SF3A3-201ENST00000373019 NUCB1Q02818 461 aa11.66□□□□□ -0.54
SF3A3-201ENST00000373019 NCBP3Q53F19 620 aaKnown RBP11.66□□□□□ -0.54
SF3A3-201ENST00000373019 ASXL1Q8IXJ9 1541 aa11.66□□□□□ -0.54
SF3A3-201ENST00000373019 BMP2KLQ5H9B9 411 aa11.66□□□□□ -0.54
SF3A3-201ENST00000373019 MLH3Q9UHC1 1453 aa11.65□□□□□ -0.54
SF3A3-201ENST00000373019 TBC1D9Q6ZT07 1266 aa11.65□□□□□ -0.54
SF3A3-201ENST00000373019 KIAA1524Q8TCG1 905 aa11.65□□□□□ -0.54
SF3A3-201ENST00000373019 ZBTB9Q96C00 473 aa11.65□□□□□ -0.54
SF3A3-201ENST00000373019 TSPY26PQ9H489 355 aa11.65□□□□□ -0.54
SF3A3-201ENST00000373019 CDCA8Q53HL2 280 aa11.65□□□□□ -0.54
SF3A3-201ENST00000373019 AEBP1Q8IUX7 1158 aa11.65□□□□□ -0.54
SF3A3-201ENST00000373019 PHF23Q9BUL5 403 aaPredicted RBP11.65□□□□□ -0.54
SF3A3-201ENST00000373019 DIAPH3Q9NSV4 1193 aa11.65□□□□□ -0.54
SF3A3-201ENST00000373019 CROCC2H7BZ55 1655 aa11.65□□□□□ -0.55
SF3A3-201ENST00000373019 ZGPATQ8N5A5 531 aaKnown RBP11.64□□□□□ -0.55
SF3A3-201ENST00000373019 LNPKQ9C0E8 428 aa11.64□□□□□ -0.55
SF3A3-201ENST00000373019 DZIP1LQ8IYY4 767 aaKnown RBP11.64□□□□□ -0.55
SF3A3-201ENST00000373019 USP25Q9UHP3 1055 aa11.64□□□□□ -0.55
SF3A3-201ENST00000373019 HECW2Q9P2P5 1572 aa11.64□□□□□ -0.55
SF3A3-201ENST00000373019 ATP7AQ04656 1500 aa11.64□□□□□ -0.55
SF3A3-201ENST00000373019 A2MP01023 1474 aa11.64□□□□□ -0.55
SF3A3-201ENST00000373019 KCNF1Q9H3M0 494 aa11.63□□□□□ -0.55
SF3A3-201ENST00000373019 HAP1P54257 671 aaPredicted RBP11.63□□□□□ -0.55
SF3A3-201ENST00000373019 KIF18AQ8NI77 898 aa11.63□□□□□ -0.55
SF3A3-201ENST00000373019 RNF216Q9NWF9 866 aaPredicted RBP11.63□□□□□ -0.55
SF3A3-201ENST00000373019 PYCARDQ9ULZ3 195 aa11.63□□□□□ -0.55
SF3A3-201ENST00000373019 SOX12O15370 315 aa11.63□□□□□ -0.55
SF3A3-201ENST00000373019 ADCY5O95622 1261 aa11.63□□□□□ -0.55
SF3A3-201ENST00000373019 NAA30Q147X3 362 aaPredicted RBP11.63□□□□□ -0.55
SF3A3-201ENST00000373019 FAM53CQ9NYF3 392 aa11.63□□□□□ -0.55
SF3A3-201ENST00000373019 FEZ2Q9UHY8 353 aaPredicted RBP11.63□□□□□ -0.55
SF3A3-201ENST00000373019 STAG3Q9UJ98 1225 aa11.63□□□□□ -0.55
SF3A3-201ENST00000373019 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.62□□□□□ -0.55
SF3A3-201ENST00000373019 MMP14P50281 582 aa11.62□□□□□ -0.55
SF3A3-201ENST00000373019 SYCP1Q15431 976 aa11.62□□□□□ -0.55
SF3A3-201ENST00000373019 NEUROD2Q15784 382 aa11.62□□□□□ -0.55
SF3A3-201ENST00000373019 ZKSCAN2Q63HK3 967 aa11.62□□□□□ -0.55
SF3A3-201ENST00000373019 CALCOCO1Q9P1Z2 691 aa11.62□□□□□ -0.55
SF3A3-201ENST00000373019 RRP7AQ9Y3A4 280 aaKnown RBP11.62□□□□□ -0.55
SF3A3-201ENST00000373019 SYNMO15061 1565 aa11.62□□□□□ -0.55
SF3A3-201ENST00000373019 HSPA2P54652 639 aa11.62□□□□□ -0.55
SF3A3-201ENST00000373019 CHD1LQ86WJ1 897 aa11.62□□□□□ -0.55
SF3A3-201ENST00000373019 CHMP4CQ96CF2 233 aa11.62□□□□□ -0.55
SF3A3-201ENST00000373019 ERICH4A6NGS2 130 aa11.61□□□□□ -0.55
SF3A3-201ENST00000373019 CWC22Q9HCG8 908 aaKnown RBP11.61□□□□□ -0.55
SF3A3-201ENST00000373019 TRIM27P14373 513 aa11.61□□□□□ -0.55
SF3A3-201ENST00000373019 RGL3Q3MIN7 710 aa11.61□□□□□ -0.55
SF3A3-201ENST00000373019 ARHGEF5Q12774 1597 aa11.61□□□□□ -0.55
SF3A3-201ENST00000373019 MYOM1P52179 1685 aa11.61□□□□□ -0.55
SF3A3-201ENST00000373019 MBD3O95983 291 aa11.61□□□□□ -0.55
SF3A3-201ENST00000373019 UVSSAQ2YD98 709 aa11.61□□□□□ -0.55
SF3A3-201ENST00000373019 ZBTB40Q9NUA8 1239 aa11.6□□□□□ -0.55
SF3A3-201ENST00000373019 SLC52A1Q9NWF4 448 aa11.6□□□□□ -0.55
SF3A3-201ENST00000373019 IQSEC2Q5JU85 1478 aa11.6□□□□□ -0.55
SF3A3-201ENST00000373019 TRERF1Q96PN7 1200 aa11.6□□□□□ -0.55
SF3A3-201ENST00000373019 CHAF1AQ13111 956 aaPredicted RBP11.59□□□□□ -0.55
SF3A3-201ENST00000373019 PPP6R1Q9UPN7 881 aa11.59□□□□□ -0.55
SF3A3-201ENST00000373019 PSEN1P49768 467 aa11.59□□□□□ -0.55
SF3A3-201ENST00000373019 RABEP1Q15276 862 aa11.59□□□□□ -0.55
SF3A3-201ENST00000373019 ARHGEF40Q8TER5 1519 aa11.59□□□□□ -0.55
SF3A3-201ENST00000373019 WDR63Q8IWG1 891 aa11.59□□□□□ -0.55
SF3A3-201ENST00000373019 DDX19BQ9UMR2 479 aa11.59□□□□□ -0.55
SF3A3-201ENST00000373019 SHPRHQ149N8 1683 aa11.59□□□□□ -0.55
SF3A3-201ENST00000373019 AP5Z1O43299 807 aa11.58□□□□□ -0.55
SF3A3-201ENST00000373019 BRD2P25440 801 aaKnown RBP11.58□□□□□ -0.55
SF3A3-201ENST00000373019 KRT222Q8N1A0 295 aa11.58□□□□□ -0.55
SF3A3-201ENST00000373019 YY1AP1Q9H869 796 aa11.58□□□□□ -0.55
SF3A3-201ENST00000373019 RICTORQ6R327 1708 aa11.58□□□□□ -0.56
SF3A3-201ENST00000373019 ST7Q9NRC1 585 aa11.58□□□□□ -0.56
SF3A3-201ENST00000373019 SHANK2Q9UPX8 1470 aa11.58□□□□□ -0.56
SF3A3-201ENST00000373019 HNRNPH2P55795 449 aaKnown RBP11.58□□□□□ -0.56
SF3A3-201ENST00000373019 NUTM2DQ5VT03 806 aaPredicted RBP11.58□□□□□ -0.56
SF3A3-201ENST00000373019 ITPRIPQ8IWB1 547 aa11.58□□□□□ -0.56
SF3A3-201ENST00000373019 FAM184AQ8NB25 1140 aa11.58□□□□□ -0.56
SF3A3-201ENST00000373019 ANKRD36BQ8N2N9 1353 aa11.58□□□□□ -0.56
SF3A3-201ENST00000373019 TCP11L2Q8N4U5 519 aa11.57□□□□□ -0.56
SF3A3-201ENST00000373019 TSPYL1Q9H0U9 437 aa11.57□□□□□ -0.56
SF3A3-201ENST00000373019 GEMIN8Q9NWZ8 242 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms