RNA–Protein interactions for RNA: ENST00000373017.5

LCN2-203, Transcript of lipocalin 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene LCN2, Length 848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-203ENST00000373017 CRB1P82279 1406 aa23.39■■□□□ 1.33
LCN2-203ENST00000373017 TCP11L2Q8N4U5 519 aa23.38■■□□□ 1.33
LCN2-203ENST00000373017 EDC4Q6P2E9 1401 aaKnown RBP23.38■■□□□ 1.33
LCN2-203ENST00000373017 KCNH5Q8NCM2 988 aa23.36■■□□□ 1.33
LCN2-203ENST00000373017 PEAK1Q9H792 1746 aa23.35■■□□□ 1.33
LCN2-203ENST00000373017 CLSPNQ9HAW4 1339 aa23.34■■□□□ 1.33
LCN2-203ENST00000373017 ABCC6O95255 1503 aa23.34■■□□□ 1.33
LCN2-203ENST00000373017 SF3B2Q13435 895 aaKnown RBP23.34■■□□□ 1.33
LCN2-203ENST00000373017 HDGFL2Q7Z4V5 671 aaPredicted RBP23.34■■□□□ 1.33
LCN2-203ENST00000373017 OVOS2A0A0J9YW53 1432 aa23.33■■□□□ 1.33
LCN2-203ENST00000373017 OVOS2Q6IE36 1432 aa23.33■■□□□ 1.33
LCN2-203ENST00000373017 SBF2Q86WG5 1849 aa23.33■■□□□ 1.33
LCN2-203ENST00000373017 MYOM1P52179 1685 aa23.33■■□□□ 1.33
LCN2-203ENST00000373017 THRAP3Q9Y2W1 955 aaKnown RBP23.33■■□□□ 1.33
LCN2-203ENST00000373017 WDR17Q8IZU2 1322 aa23.33■■□□□ 1.32
LCN2-203ENST00000373017 TERF2IPQ9NYB0 399 aa23.32■■□□□ 1.32
LCN2-203ENST00000373017 NINLQ9Y2I6 1382 aa23.31■■□□□ 1.32
LCN2-203ENST00000373017 TOM1L2Q6ZVM7 507 aa23.3■■□□□ 1.32
LCN2-203ENST00000373017 DISP2A7MBM2 1401 aa23.3■■□□□ 1.32
LCN2-203ENST00000373017 TIMELESSQ9UNS1 1208 aa23.29■■□□□ 1.32
LCN2-203ENST00000373017 BAG6P46379 1132 aa23.28■■□□□ 1.32
LCN2-203ENST00000373017 EN1Q05925 392 aaPredicted RBP23.28■■□□□ 1.32
LCN2-203ENST00000373017 FAM196AQ6ZSG2 479 aa23.28■■□□□ 1.32
LCN2-203ENST00000373017 TRIM37O94972 964 aa23.27■■□□□ 1.32
LCN2-203ENST00000373017 PDE3BQ13370 1112 aa23.27■■□□□ 1.32
LCN2-203ENST00000373017 ANKRD36BQ8N2N9 1353 aa23.27■■□□□ 1.31
LCN2-203ENST00000373017 KIF20BQ96Q89 1820 aa23.26■■□□□ 1.31
LCN2-203ENST00000373017 RREB1Q92766 1687 aa23.26■■□□□ 1.31
LCN2-203ENST00000373017 TMF1P82094 1093 aa23.25■■□□□ 1.31
LCN2-203ENST00000373017 SLC24A1O60721 1099 aa23.24■■□□□ 1.31
LCN2-203ENST00000373017 NUP188Q5SRE5 1749 aa23.23■■□□□ 1.31
LCN2-203ENST00000373017 RGPD2P0DJD1 1756 aa23.23■■□□□ 1.31
LCN2-203ENST00000373017 CARD10Q9BWT7 1032 aa23.23■■□□□ 1.31
LCN2-203ENST00000373017 CSB-PGBD3P0DP91 1061 aa23.22■■□□□ 1.31
LCN2-203ENST00000373017 ERBB3P21860 1342 aa23.22■■□□□ 1.31
LCN2-203ENST00000373017 EZH2Q15910 746 aaKnown RBP23.21■■□□□ 1.31
LCN2-203ENST00000373017 OVOS2A0A0G2JMS6 1433 aa23.2■■□□□ 1.3
LCN2-203ENST00000373017 DDB1Q16531 1140 aa23.2■■□□□ 1.3
LCN2-203ENST00000373017 CAMKK2Q96RR4 588 aa23.2■■□□□ 1.3
LCN2-203ENST00000373017 FAM208AQ9UK61 1670 aaKnown RBP23.19■■□□□ 1.3
LCN2-203ENST00000373017 FBLN1P23142 703 aa23.19■■□□□ 1.3
LCN2-203ENST00000373017 CCER1Q8TC90 406 aaPredicted RBP23.18■■□□□ 1.3
LCN2-203ENST00000373017 CCDC7Q96M83 1385 aa23.17■■□□□ 1.3
LCN2-203ENST00000373017 APBA3O96018 575 aa23.17■■□□□ 1.3
LCN2-203ENST00000373017 MARCH10Q8NA82 808 aaPredicted RBP23.17■■□□□ 1.3
LCN2-203ENST00000373017 RGPD3A6NKT7 1758 aaPredicted RBP23.17■■□□□ 1.3
LCN2-203ENST00000373017 RGPD4Q7Z3J3 1758 aa23.17■■□□□ 1.3
LCN2-203ENST00000373017 PSDA5PKW4 1024 aaPredicted RBP23.16■■□□□ 1.3
LCN2-203ENST00000373017 ANKRD24Q8TF21 1146 aa23.16■■□□□ 1.3
LCN2-203ENST00000373017 FYB1O15117 783 aa23.15■■□□□ 1.3
LCN2-203ENST00000373017 PTF1AQ7RTS3 328 aa23.15■■□□□ 1.3
LCN2-203ENST00000373017 COG3Q96JB2 828 aa23.15■■□□□ 1.3
LCN2-203ENST00000373017 CDCA7Q9BWT1 371 aaPredicted RBP23.15■■□□□ 1.3
LCN2-203ENST00000373017 TNS2Q63HR2 1409 aa23.15■■□□□ 1.3
LCN2-203ENST00000373017 MAP3K19Q56UN5 1328 aa23.14■■□□□ 1.3
LCN2-203ENST00000373017 LRP5O75197 1615 aa23.14■■□□□ 1.29
LCN2-203ENST00000373017 IP6K1Q92551 441 aa23.13■■□□□ 1.29
LCN2-203ENST00000373017 GGNBP2Q9H3C7 697 aa23.13■■□□□ 1.29
LCN2-203ENST00000373017 NLRP2Q9NX02 1062 aa23.13■■□□□ 1.29
LCN2-203ENST00000373017 BCL9O00512 1426 aa23.12■■□□□ 1.29
LCN2-203ENST00000373017 CDCA8Q53HL2 280 aa23.12■■□□□ 1.29
LCN2-203ENST00000373017 CARD14Q9BXL6 1004 aa23.12■■□□□ 1.29
LCN2-203ENST00000373017 PARD3Q8TEW0 1356 aa23.12■■□□□ 1.29
LCN2-203ENST00000373017 SHANK3Q9BYB0 1731 aa23.11■■□□□ 1.29
LCN2-203ENST00000373017 NHSQ6T4R5 1651 aa23.1■■□□□ 1.29
LCN2-203ENST00000373017 HOXC9P31274 260 aa23.1■■□□□ 1.29
LCN2-203ENST00000373017 NSD3Q9BZ95 1437 aa23.09■■□□□ 1.29
LCN2-203ENST00000373017 KAT6BQ8WYB5 2073 aa23.09■■□□□ 1.29
LCN2-203ENST00000373017 C11orf95C9JLR9 678 aaPredicted RBP23.08■■□□□ 1.29
LCN2-203ENST00000373017 EXOC5O00471 708 aa23.08■■□□□ 1.29
LCN2-203ENST00000373017 R3HDM1Q15032 1099 aaKnown RBP23.08■■□□□ 1.29
LCN2-203ENST00000373017 RRS1Q15050 365 aaKnown RBP23.08■■□□□ 1.29
LCN2-203ENST00000373017 LTV1Q96GA3 475 aaPredicted RBP23.08■■□□□ 1.29
LCN2-203ENST00000373017 ANKRD26Q9UPS8 1709 aa23.07■■□□□ 1.28
LCN2-203ENST00000373017 HSPA5P11021 654 aaKnown RBP23.06■■□□□ 1.28
LCN2-203ENST00000373017 IL2RBP14784 551 aa23.06■■□□□ 1.28
LCN2-203ENST00000373017 MAP2P11137 1827 aaKnown RBP23.05■■□□□ 1.28
LCN2-203ENST00000373017 RTL1A6NKG5 1358 aa23.05■■□□□ 1.28
LCN2-203ENST00000373017 BCL11BQ9C0K0 894 aaPredicted RBP23.05■■□□□ 1.28
LCN2-203ENST00000373017 BTAF1O14981 1849 aa23.04■■□□□ 1.28
LCN2-203ENST00000373017 AMPHP49418 695 aa23.04■■□□□ 1.28
LCN2-203ENST00000373017 EIF4G2P78344 907 aaKnown RBP eCLIP23.02■■□□□ 1.28
LCN2-203ENST00000373017 PLSCR1O15162 318 aa23.01■■□□□ 1.27
LCN2-203ENST00000373017 KCNQ2O43526 872 aa23.01■■□□□ 1.27
LCN2-203ENST00000373017 MEGF6O75095 1541 aa23.01■■□□□ 1.27
LCN2-203ENST00000373017 POLR3GLQ9BT43 218 aa23■■□□□ 1.27
LCN2-203ENST00000373017 DOT1LQ8TEK3 1739 aa22.99■■□□□ 1.27
LCN2-203ENST00000373017 PROM2Q8N271 834 aa22.99■■□□□ 1.27
LCN2-203ENST00000373017 NBPF6Q5VWK0 638 aa22.98■■□□□ 1.27
LCN2-203ENST00000373017 ACSBG1Q96GR2 724 aa22.98■■□□□ 1.27
LCN2-203ENST00000373017 NBPF4Q96M43 638 aa22.98■■□□□ 1.27
LCN2-203ENST00000373017 HSP90AB2PQ58FF8 381 aa22.97■■□□□ 1.27
LCN2-203ENST00000373017 CASZ1Q86V15 1759 aa22.96■■□□□ 1.27
LCN2-203ENST00000373017 EMILIN1Q9Y6C2 1016 aa22.96■■□□□ 1.27
LCN2-203ENST00000373017 INSRP06213 1382 aa22.96■■□□□ 1.27
LCN2-203ENST00000373017 FLT4P35916 1363 aa22.96■■□□□ 1.27
LCN2-203ENST00000373017 USHBP1Q8N6Y0 703 aa22.95■■□□□ 1.26
LCN2-203ENST00000373017 ANO8Q9HCE9 1232 aaPredicted RBP22.95■■□□□ 1.26
LCN2-203ENST00000373017 KIF24Q5T7B8 1368 aa22.94■■□□□ 1.26
LCN2-203ENST00000373017 PAPPAQ13219 1627 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms