RNA–Protein interactions for RNA: ENST00000372088.6

CCSER2-203, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 2 BASIC

Gene CCSER2, Length 7,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-203ENST00000372088 TPM3P06753 285 aa17.03■□□□□ 0.32
CCSER2-203ENST00000372088 ZNF530Q6P9A1 599 aaPredicted RBP17.03■□□□□ 0.32
CCSER2-203ENST00000372088 FAM43AQ8N2R8 423 aa17.03■□□□□ 0.32
CCSER2-203ENST00000372088 NLRP2Q9NX02 1062 aa17.03■□□□□ 0.32
CCSER2-203ENST00000372088 LETM1O95202 739 aaPredicted RBP17.02■□□□□ 0.32
CCSER2-203ENST00000372088 SIRT1Q96EB6 747 aa17.02■□□□□ 0.32
CCSER2-203ENST00000372088 WAPLQ7Z5K2 1190 aa17.02■□□□□ 0.32
CCSER2-203ENST00000372088 SOS1Q07889 1333 aaPredicted RBP17.02■□□□□ 0.32
CCSER2-203ENST00000372088 FAM184AQ8NB25 1140 aa17.02■□□□□ 0.31
CCSER2-203ENST00000372088 MAST1Q9Y2H9 1570 aa17.01■□□□□ 0.31
CCSER2-203ENST00000372088 PTPRTO14522 1441 aa17.01■□□□□ 0.31
CCSER2-203ENST00000372088 SLC26A8Q96RN1 970 aa17.01■□□□□ 0.31
CCSER2-203ENST00000372088 CDK11BP21127 795 aaKnown RBP17.01■□□□□ 0.31
CCSER2-203ENST00000372088 RRS1Q15050 365 aaKnown RBP17.01■□□□□ 0.31
CCSER2-203ENST00000372088 ZSCAN31Q96LW9 406 aaPredicted RBP17.01■□□□□ 0.31
CCSER2-203ENST00000372088 PDZRN4Q6ZMN7 1036 aaPredicted RBP17■□□□□ 0.31
CCSER2-203ENST00000372088 TPRNQ4KMQ1 711 aa17■□□□□ 0.31
CCSER2-203ENST00000372088 WDR33Q9C0J8 1336 aaKnown RBP17■□□□□ 0.31
CCSER2-203ENST00000372088 AMOTQ4VCS5 1084 aa17■□□□□ 0.31
CCSER2-203ENST00000372088 NEO1Q92859 1461 aa17■□□□□ 0.31
CCSER2-203ENST00000372088 RAB11FIP3O75154 756 aa17■□□□□ 0.31
CCSER2-203ENST00000372088 GNAT3A8MTJ3 354 aa16.99■□□□□ 0.31
CCSER2-203ENST00000372088 CEP170Q5SW79 1584 aa16.99■□□□□ 0.31
CCSER2-203ENST00000372088 H3BQV1 296 aa16.99■□□□□ 0.31
CCSER2-203ENST00000372088 IFFO2Q5TF58 517 aa16.99■□□□□ 0.31
CCSER2-203ENST00000372088 C1orf115Q9H7X2 142 aa16.99■□□□□ 0.31
CCSER2-203ENST00000372088 TNRQ92752 1358 aa16.99■□□□□ 0.31
CCSER2-203ENST00000372088 IGHDP01880 384 aa16.99■□□□□ 0.31
CCSER2-203ENST00000372088 ATF3P18847 181 aa16.99■□□□□ 0.31
CCSER2-203ENST00000372088 RIC3Q7Z5B4 369 aa16.98■□□□□ 0.31
CCSER2-203ENST00000372088 TBC1D2Q9BYX2 928 aa16.98■□□□□ 0.31
CCSER2-203ENST00000372088 C8orf34Q49A92 452 aa16.98■□□□□ 0.31
CCSER2-203ENST00000372088 KDM2BQ8NHM5 1336 aa16.98■□□□□ 0.31
CCSER2-203ENST00000372088 ATP7AQ04656 1500 aa16.98■□□□□ 0.31
CCSER2-203ENST00000372088 SF3A1Q15459 793 aaKnown RBP16.98■□□□□ 0.31
CCSER2-203ENST00000372088 ZNF330Q9Y3S2 320 aaPredicted RBP16.98■□□□□ 0.31
CCSER2-203ENST00000372088 POLKQ9UBT6 870 aa16.97■□□□□ 0.31
CCSER2-203ENST00000372088 TATP17735 454 aaPredicted RBP16.97■□□□□ 0.31
CCSER2-203ENST00000372088 PCDHB15Q9Y5E8 787 aa16.97■□□□□ 0.31
CCSER2-203ENST00000372088 NASPP49321 788 aaPredicted RBP16.97■□□□□ 0.31
CCSER2-203ENST00000372088 CCDC173Q0VFZ6 552 aa16.97■□□□□ 0.31
CCSER2-203ENST00000372088 TAF7Q15545 349 aaPredicted RBP16.97■□□□□ 0.31
CCSER2-203ENST00000372088 AEBP1Q8IUX7 1158 aa16.97■□□□□ 0.31
CCSER2-203ENST00000372088 MBIPQ9NS73 344 aa16.97■□□□□ 0.31
CCSER2-203ENST00000372088 ANKRD1Q15327 319 aa16.97■□□□□ 0.31
CCSER2-203ENST00000372088 PROSER2Q86WR7 435 aaPredicted RBP16.97■□□□□ 0.31
CCSER2-203ENST00000372088 MX1P20591 662 aa16.97■□□□□ 0.31
CCSER2-203ENST00000372088 THUMPD2Q9BTF0 503 aaKnown RBP16.96■□□□□ 0.31
CCSER2-203ENST00000372088 PHF8Q9UPP1 1060 aa16.96■□□□□ 0.31
CCSER2-203ENST00000372088 FSD1Q9BTV5 496 aa16.96■□□□□ 0.3
CCSER2-203ENST00000372088 ESCO1Q5FWF5 840 aa16.95■□□□□ 0.3
CCSER2-203ENST00000372088 KIF1BPQ96EK5 621 aa16.95■□□□□ 0.3
CCSER2-203ENST00000372088 GLRX3O76003 335 aaKnown RBP16.95■□□□□ 0.3
CCSER2-203ENST00000372088 MYOM2P54296 1465 aa16.95■□□□□ 0.3
CCSER2-203ENST00000372088 NPHP1O15259 732 aa16.95■□□□□ 0.3
CCSER2-203ENST00000372088 NUCB1Q02818 461 aa16.94■□□□□ 0.3
CCSER2-203ENST00000372088 MCTP1Q6DN14 999 aa16.94■□□□□ 0.3
CCSER2-203ENST00000372088 ZNF521Q96K83 1311 aa16.94■□□□□ 0.3
CCSER2-203ENST00000372088 YTHDC2Q9H6S0 1430 aaKnown RBP16.94■□□□□ 0.3
CCSER2-203ENST00000372088 AMOTL2Q9Y2J4 779 aa16.94■□□□□ 0.3
CCSER2-203ENST00000372088 NECTIN2Q92692 538 aa16.94■□□□□ 0.3
CCSER2-203ENST00000372088 SNX21Q969T3 373 aa16.94■□□□□ 0.3
CCSER2-203ENST00000372088 RIMS2Q9UQ26 1411 aa16.94■□□□□ 0.3
CCSER2-203ENST00000372088 BECN2A8MW95 431 aa16.94■□□□□ 0.3
CCSER2-203ENST00000372088 SPG7Q9UQ90 795 aa16.94■□□□□ 0.3
CCSER2-203ENST00000372088 CCDC39Q9UFE4 941 aa16.94■□□□□ 0.3
CCSER2-203ENST00000372088 NPATQ14207 1427 aa16.94■□□□□ 0.3
CCSER2-203ENST00000372088 CPLX1O14810 134 aa16.93■□□□□ 0.3
CCSER2-203ENST00000372088 ANKRD44Q8N8A2 993 aa16.93■□□□□ 0.3
CCSER2-203ENST00000372088 PLA2R1Q13018 1463 aa16.93■□□□□ 0.3
CCSER2-203ENST00000372088 A0A1W2PP64 1363 aa16.93■□□□□ 0.3
CCSER2-203ENST00000372088 ARAP3Q8WWN8 1544 aa16.93■□□□□ 0.3
CCSER2-203ENST00000372088 SRGAP3O43295 1099 aa16.93■□□□□ 0.3
CCSER2-203ENST00000372088 KRT32Q14532 448 aa16.93■□□□□ 0.3
CCSER2-203ENST00000372088 VPS37CA5D8V6 355 aaPredicted RBP16.93■□□□□ 0.3
CCSER2-203ENST00000372088 BABAM1Q9NWV8 329 aa16.93■□□□□ 0.3
CCSER2-203ENST00000372088 TRDNQ13061 729 aa16.93■□□□□ 0.3
CCSER2-203ENST00000372088 CCDC73Q6ZRK6 1079 aa16.93■□□□□ 0.3
CCSER2-203ENST00000372088 ZBTB40Q9NUA8 1239 aa16.93■□□□□ 0.3
CCSER2-203ENST00000372088 CYP46A1Q9Y6A2 500 aa16.93■□□□□ 0.3
CCSER2-203ENST00000372088 GOLGA6L19H0YKK7 550 aa16.92■□□□□ 0.3
CCSER2-203ENST00000372088 DHX8Q14562 1220 aaKnown RBP16.92■□□□□ 0.3
CCSER2-203ENST00000372088 SYNE3Q6ZMZ3 975 aa16.92■□□□□ 0.3
CCSER2-203ENST00000372088 TRMT2AQ8IZ69 625 aaKnown RBP16.92■□□□□ 0.3
CCSER2-203ENST00000372088 FLIIQ13045 1269 aa16.91■□□□□ 0.3
CCSER2-203ENST00000372088 VAMP4O75379 141 aa16.91■□□□□ 0.3
CCSER2-203ENST00000372088 TBX22Q9Y458 520 aa16.91■□□□□ 0.3
CCSER2-203ENST00000372088 ACEP12821 1306 aa16.91■□□□□ 0.3
CCSER2-203ENST00000372088 GRPEL1Q9HAV7 217 aa16.9■□□□□ 0.3
CCSER2-203ENST00000372088 MRPL50Q8N5N7 158 aaKnown RBP16.9■□□□□ 0.3
CCSER2-203ENST00000372088 MCM10Q7L590 875 aa16.9■□□□□ 0.3
CCSER2-203ENST00000372088 FOXD4L5Q5VV16 416 aaPredicted RBP16.9■□□□□ 0.3
CCSER2-203ENST00000372088 FOXD4L4Q8WXT5 416 aaPredicted RBP16.9■□□□□ 0.3
CCSER2-203ENST00000372088 DBF4Q9UBU7 674 aaPredicted RBP16.9■□□□□ 0.3
CCSER2-203ENST00000372088 MTERF4Q7Z6M4 381 aaKnown RBP16.9■□□□□ 0.3
CCSER2-203ENST00000372088 FLT4P35916 1363 aa16.89■□□□□ 0.29
CCSER2-203ENST00000372088 MLH3Q9UHC1 1453 aa16.89■□□□□ 0.29
CCSER2-203ENST00000372088 DCTPP1Q9H773 170 aa16.89■□□□□ 0.29
CCSER2-203ENST00000372088 NUTM2GQ5VZR2 741 aa16.89■□□□□ 0.29
CCSER2-203ENST00000372088 MAP7D2Q96T17 732 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms