RNA–Protein interactions for RNA: ENST00000372044.7

CCDC17-201, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,873 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-201ENST00000372044 SUPT16HQ9Y5B9 1047 aaKnown RBP24.04■■□□□ 1.44
CCDC17-201ENST00000372044 PDE3BQ13370 1112 aa24.03■■□□□ 1.44
CCDC17-201ENST00000372044 AMPHP49418 695 aa24.02■■□□□ 1.44
CCDC17-201ENST00000372044 USP19O94966 1318 aa24.02■■□□□ 1.44
CCDC17-201ENST00000372044 PRKAR2BP31323 418 aa24.01■■□□□ 1.43
CCDC17-201ENST00000372044 SPINK5Q9NQ38 1064 aaPredicted RBP24.01■■□□□ 1.43
CCDC17-201ENST00000372044 FCHSD2O94868 740 aa24■■□□□ 1.43
CCDC17-201ENST00000372044 HOXC9P31274 260 aa24■■□□□ 1.43
CCDC17-201ENST00000372044 TNS3Q68CZ2 1445 aa24■■□□□ 1.43
CCDC17-201ENST00000372044 WWC1Q8IX03 1113 aa24■■□□□ 1.43
CCDC17-201ENST00000372044 GCP02774 474 aa23.99■■□□□ 1.43
CCDC17-201ENST00000372044 AEBP1Q8IUX7 1158 aa23.99■■□□□ 1.43
CCDC17-201ENST00000372044 PHACTR3Q96KR7 559 aa23.98■■□□□ 1.43
CCDC17-201ENST00000372044 PHF23Q9BUL5 403 aaPredicted RBP23.98■■□□□ 1.43
CCDC17-201ENST00000372044 KIF24Q5T7B8 1368 aa23.97■■□□□ 1.43
CCDC17-201ENST00000372044 ROBO1Q9Y6N7 1651 aa23.97■■□□□ 1.43
CCDC17-201ENST00000372044 TMPOP42166 694 aaKnown RBP23.97■■□□□ 1.43
CCDC17-201ENST00000372044 GOLGA2Q08379 1002 aa23.97■■□□□ 1.43
CCDC17-201ENST00000372044 KCNH5Q8NCM2 988 aa23.97■■□□□ 1.43
CCDC17-201ENST00000372044 MAPK8IP3Q9UPT6 1336 aa23.97■■□□□ 1.43
CCDC17-201ENST00000372044 SPATA31A3Q5VYP0 1347 aa23.96■■□□□ 1.43
CCDC17-201ENST00000372044 NGEFQ8N5V2 710 aa23.96■■□□□ 1.43
CCDC17-201ENST00000372044 RTL1A6NKG5 1358 aa23.95■■□□□ 1.43
CCDC17-201ENST00000372044 ABCA3Q99758 1704 aa23.95■■□□□ 1.43
CCDC17-201ENST00000372044 ZBTB7CA1YPR0 619 aa23.95■■□□□ 1.42
CCDC17-201ENST00000372044 DUSP27Q5VZP5 1158 aa23.95■■□□□ 1.42
CCDC17-201ENST00000372044 SULT6B1Q6IMI4 303 aa23.95■■□□□ 1.42
CCDC17-201ENST00000372044 SLFN5Q08AF3 891 aa23.94■■□□□ 1.42
CCDC17-201ENST00000372044 COL18A1P39060 1754 aa23.94■■□□□ 1.42
CCDC17-201ENST00000372044 CABLES1Q8TDN4 633 aa23.94■■□□□ 1.42
CCDC17-201ENST00000372044 SOS2Q07890 1332 aaPredicted RBP23.94■■□□□ 1.42
CCDC17-201ENST00000372044 ARHGEF25Q86VW2 580 aa23.93■■□□□ 1.42
CCDC17-201ENST00000372044 TRIM35Q9UPQ4 493 aa23.93■■□□□ 1.42
CCDC17-201ENST00000372044 CCDC27Q2M243 656 aa23.92■■□□□ 1.42
CCDC17-201ENST00000372044 IP6K1Q92551 441 aa23.92■■□□□ 1.42
CCDC17-201ENST00000372044 LTV1Q96GA3 475 aaPredicted RBP23.92■■□□□ 1.42
CCDC17-201ENST00000372044 EYA1Q99502 592 aa23.92■■□□□ 1.42
CCDC17-201ENST00000372044 PNNQ9H307 717 aaKnown RBP23.92■■□□□ 1.42
CCDC17-201ENST00000372044 ARHGEF10O15013 1369 aa23.92■■□□□ 1.42
CCDC17-201ENST00000372044 TRMT2AQ8IZ69 625 aaKnown RBP23.92■■□□□ 1.42
CCDC17-201ENST00000372044 IGSF1Q8N6C5 1336 aa23.9■■□□□ 1.42
CCDC17-201ENST00000372044 RIPK4P57078 832 aa23.9■■□□□ 1.42
CCDC17-201ENST00000372044 ZC3H6P61129 1189 aaKnown RBP23.89■■□□□ 1.41
CCDC17-201ENST00000372044 FKBP8Q14318 412 aa23.89■■□□□ 1.41
CCDC17-201ENST00000372044 KDRP35968 1356 aa23.89■■□□□ 1.41
CCDC17-201ENST00000372044 IRX6P78412 446 aaPredicted RBP23.88■■□□□ 1.41
CCDC17-201ENST00000372044 NCBP3Q53F19 620 aaKnown RBP23.88■■□□□ 1.41
CCDC17-201ENST00000372044 AXIN2Q9Y2T1 843 aa23.87■■□□□ 1.41
CCDC17-201ENST00000372044 E9PSI1 815 aa23.86■■□□□ 1.41
CCDC17-201ENST00000372044 NFE2L2Q16236 605 aa23.86■■□□□ 1.41
CCDC17-201ENST00000372044 WDR63Q8IWG1 891 aa23.85■■□□□ 1.41
CCDC17-201ENST00000372044 RCAN3Q9UKA8 241 aa23.85■■□□□ 1.41
CCDC17-201ENST00000372044 CAMTA1Q9Y6Y1 1673 aa23.85■■□□□ 1.41
CCDC17-201ENST00000372044 NEFMP07197 916 aa23.84■■□□□ 1.41
CCDC17-201ENST00000372044 USHBP1Q8N6Y0 703 aa23.84■■□□□ 1.41
CCDC17-201ENST00000372044 RNF123Q5XPI4 1314 aa23.83■■□□□ 1.41
CCDC17-201ENST00000372044 AHDC1Q5TGY3 1603 aaPredicted RBP23.82■■□□□ 1.4
CCDC17-201ENST00000372044 LRRC59Q96AG4 307 aaKnown RBP23.82■■□□□ 1.4
CCDC17-201ENST00000372044 NEFLP07196 543 aa23.81■■□□□ 1.4
CCDC17-201ENST00000372044 NBPF6Q5VWK0 638 aa23.81■■□□□ 1.4
CCDC17-201ENST00000372044 NBPF4Q96M43 638 aa23.81■■□□□ 1.4
CCDC17-201ENST00000372044 THUMPD2Q9BTF0 503 aaKnown RBP23.81■■□□□ 1.4
CCDC17-201ENST00000372044 VIRMAQ69YN4 1812 aaKnown RBP23.81■■□□□ 1.4
CCDC17-201ENST00000372044 LMO7Q8WWI1 1683 aa23.79■■□□□ 1.4
CCDC17-201ENST00000372044 KIAA0232Q92628 1395 aa23.79■■□□□ 1.4
CCDC17-201ENST00000372044 PHLPP1O60346 1717 aa23.79■■□□□ 1.4
CCDC17-201ENST00000372044 FAM83GA6ND36 823 aa23.79■■□□□ 1.4
CCDC17-201ENST00000372044 CHRNA2Q15822 529 aa23.79■■□□□ 1.4
CCDC17-201ENST00000372044 ANKRD24Q8TF21 1146 aa23.79■■□□□ 1.4
CCDC17-201ENST00000372044 TSR2Q969E8 191 aaKnown RBP23.77■■□□□ 1.4
CCDC17-201ENST00000372044 FAM208AQ9UK61 1670 aaKnown RBP23.76■■□□□ 1.39
CCDC17-201ENST00000372044 DCTN1Q14203 1278 aa23.76■■□□□ 1.39
CCDC17-201ENST00000372044 MTHFSDQ2M296 383 aaKnown RBP23.76■■□□□ 1.39
CCDC17-201ENST00000372044 CPDO75976 1380 aa23.76■■□□□ 1.39
CCDC17-201ENST00000372044 NCAPD2Q15021 1401 aa23.76■■□□□ 1.39
CCDC17-201ENST00000372044 ABCC6O95255 1503 aa23.75■■□□□ 1.39
CCDC17-201ENST00000372044 ERBB3P21860 1342 aa23.75■■□□□ 1.39
CCDC17-201ENST00000372044 COL16A1Q07092 1604 aaPredicted RBP23.75■■□□□ 1.39
CCDC17-201ENST00000372044 FANCIQ9NVI1 1328 aa23.75■■□□□ 1.39
CCDC17-201ENST00000372044 RRP1P56182 461 aaKnown RBP23.73■■□□□ 1.39
CCDC17-201ENST00000372044 COL22A1Q8NFW1 1626 aaPredicted RBP23.73■■□□□ 1.39
CCDC17-201ENST00000372044 IL16Q14005 1332 aa23.73■■□□□ 1.39
CCDC17-201ENST00000372044 MYH16Q9H6N6 1097 aa23.71■■□□□ 1.39
CCDC17-201ENST00000372044 LRRC37A3O60309 1634 aa23.7■■□□□ 1.38
CCDC17-201ENST00000372044 PLIN1O60240 522 aa23.7■■□□□ 1.38
CCDC17-201ENST00000372044 MCM10Q7L590 875 aa23.69■■□□□ 1.38
CCDC17-201ENST00000372044 PIP4K2BP78356 416 aa23.68■■□□□ 1.38
CCDC17-201ENST00000372044 LMOD3Q0VAK6 560 aa23.68■■□□□ 1.38
CCDC17-201ENST00000372044 LAS1LQ9Y4W2 734 aaKnown RBP23.68■■□□□ 1.38
CCDC17-201ENST00000372044 HAP1P54257 671 aaPredicted RBP23.67■■□□□ 1.38
CCDC17-201ENST00000372044 PRDM11Q9NQV5 511 aa23.67■■□□□ 1.38
CCDC17-201ENST00000372044 BCAR3O75815 825 aa23.66■■□□□ 1.38
CCDC17-201ENST00000372044 EXOSC9Q06265 439 aaKnown RBP23.66■■□□□ 1.38
CCDC17-201ENST00000372044 ZNF853P0CG23 659 aa23.66■■□□□ 1.38
CCDC17-201ENST00000372044 GAS2L2Q8NHY3 880 aa23.66■■□□□ 1.38
CCDC17-201ENST00000372044 TOM1O60784 492 aa23.65■■□□□ 1.38
CCDC17-201ENST00000372044 NLRP2Q9NX02 1062 aa23.64■■□□□ 1.37
CCDC17-201ENST00000372044 COL5A2P05997 1499 aaPredicted RBP23.64■■□□□ 1.37
CCDC17-201ENST00000372044 CRB1P82279 1406 aa23.63■■□□□ 1.37
CCDC17-201ENST00000372044 IFT57Q9NWB7 429 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms