RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 TTC12Q9H892 705 aaPredicted RBP15.04■□□□□ -0
GPC4-201ENST00000370828 TSPYL4Q9UJ04 414 aa15.04■□□□□ -0
GPC4-201ENST00000370828 KDM4AO75164 1064 aa15.04■□□□□ -0
GPC4-201ENST00000370828 KIAA0754O94854 1291 aa15.04■□□□□ -0
GPC4-201ENST00000370828 UBTFL1P0CB47 393 aaPredicted RBP15.04■□□□□ -0
GPC4-201ENST00000370828 PRKAR2BP31323 418 aa15.04■□□□□ -0
GPC4-201ENST00000370828 BRPF1P55201 1214 aaPredicted RBP15.04■□□□□ -0
GPC4-201ENST00000370828 LRSAM1Q6UWE0 723 aa15.04■□□□□ -0
GPC4-201ENST00000370828 PRIM1P49642 420 aaKnown RBP15.03■□□□□ -0
GPC4-201ENST00000370828 CYP46A1Q9Y6A2 500 aa15.03■□□□□ -0
GPC4-201ENST00000370828 HCLS1P14317 486 aaPredicted RBP15.03■□□□□ -0
GPC4-201ENST00000370828 ME1P48163 572 aa15.03■□□□□ -0
GPC4-201ENST00000370828 CASKIN1Q8WXD9 1431 aa15.03■□□□□ -0
GPC4-201ENST00000370828 IBSPP21815 317 aaPredicted RBP15.02■□□□□ -0
GPC4-201ENST00000370828 STK38Q15208 465 aa15.02■□□□□ -0
GPC4-201ENST00000370828 HSP90AB4PQ58FF6 505 aa15.02■□□□□ -0
GPC4-201ENST00000370828 KRT222Q8N1A0 295 aa15.02■□□□□ -0
GPC4-201ENST00000370828 CEP89Q96ST8 783 aa15.02■□□□□ -0
GPC4-201ENST00000370828 URI1O94763 535 aaPredicted RBP15.02□□□□□ -0.01
GPC4-201ENST00000370828 CLIP2Q9UDT6 1046 aa15.02□□□□□ -0.01
GPC4-201ENST00000370828 NKTRP30414 1462 aaKnown RBP15.02□□□□□ -0.01
GPC4-201ENST00000370828 DYDC1Q8WWB3 177 aa15.02□□□□□ -0.01
GPC4-201ENST00000370828 NAIPQ13075 1403 aa15.01□□□□□ -0.01
GPC4-201ENST00000370828 CDR1P51861 262 aa15.01□□□□□ -0.01
GPC4-201ENST00000370828 CKAP2LQ8IYA6 745 aa15.01□□□□□ -0.01
GPC4-201ENST00000370828 CEP57L1Q8IYX8 460 aa15.01□□□□□ -0.01
GPC4-201ENST00000370828 FSD1Q9BTV5 496 aa15.01□□□□□ -0.01
GPC4-201ENST00000370828 SLC12A5Q9H2X9 1139 aa15.01□□□□□ -0.01
GPC4-201ENST00000370828 CENPHQ9H3R5 247 aa15.01□□□□□ -0.01
GPC4-201ENST00000370828 CFAP70Q5T0N1 1121 aa15.01□□□□□ -0.01
GPC4-201ENST00000370828 CABP2Q9NPB3 220 aa15.01□□□□□ -0.01
GPC4-201ENST00000370828 KIF20AO95235 890 aa15.01□□□□□ -0.01
GPC4-201ENST00000370828 TBC1D9Q6ZT07 1266 aa15.01□□□□□ -0.01
GPC4-201ENST00000370828 SSH1Q8WYL5 1049 aa15.01□□□□□ -0.01
GPC4-201ENST00000370828 FYCO1Q9BQS8 1478 aa15□□□□□ -0.01
GPC4-201ENST00000370828 CLASRPQ8N2M8 674 aaKnown RBP15□□□□□ -0.01
GPC4-201ENST00000370828 GNAI3P08754 354 aa15□□□□□ -0.01
GPC4-201ENST00000370828 KIAA1107Q9UPP5 1409 aa15□□□□□ -0.01
GPC4-201ENST00000370828 PCDHB15Q9Y5E8 787 aa15□□□□□ -0.01
GPC4-201ENST00000370828 KIF2AO00139 706 aaPredicted RBP14.99□□□□□ -0.01
GPC4-201ENST00000370828 ZNF396Q96N95 335 aaPredicted RBP14.99□□□□□ -0.01
GPC4-201ENST00000370828 VGLL3A8MV65 326 aa14.99□□□□□ -0.01
GPC4-201ENST00000370828 TMEM132EQ6IEE7 984 aa14.99□□□□□ -0.01
GPC4-201ENST00000370828 SMARCA5O60264 1052 aaPredicted RBP14.99□□□□□ -0.01
GPC4-201ENST00000370828 ATP2B1P20020 1258 aa14.99□□□□□ -0.01
GPC4-201ENST00000370828 SFPQP23246 707 aaKnown RBP eCLIP14.99□□□□□ -0.01
GPC4-201ENST00000370828 HDGFP51858 240 aaKnown RBP14.99□□□□□ -0.01
GPC4-201ENST00000370828 LRRCC1Q9C099 1032 aa14.99□□□□□ -0.01
GPC4-201ENST00000370828 ERBINQ96RT1 1412 aa14.99□□□□□ -0.01
GPC4-201ENST00000370828 RBM25P49756 843 aaKnown RBP14.98□□□□□ -0.01
GPC4-201ENST00000370828 TRDNQ13061 729 aa14.98□□□□□ -0.01
GPC4-201ENST00000370828 RRP12Q5JTH9 1297 aaKnown RBP14.98□□□□□ -0.01
GPC4-201ENST00000370828 NFXL1Q6ZNB6 911 aa14.98□□□□□ -0.01
GPC4-201ENST00000370828 NGDNQ8NEJ9 315 aaKnown RBP14.98□□□□□ -0.01
GPC4-201ENST00000370828 RBM42Q9BTD8 480 aaKnown RBP14.98□□□□□ -0.01
GPC4-201ENST00000370828 FBXO3Q9UK99 471 aa14.98□□□□□ -0.01
GPC4-201ENST00000370828 GNAI2P04899 355 aa14.98□□□□□ -0.01
GPC4-201ENST00000370828 JAKMIP1Q96N16 626 aaKnown RBP14.98□□□□□ -0.01
GPC4-201ENST00000370828 MAP3K1Q13233 1512 aa14.98□□□□□ -0.01
GPC4-201ENST00000370828 CCDC83Q8IWF9 413 aa14.98□□□□□ -0.01
GPC4-201ENST00000370828 OSCARQ8IYS5 282 aa14.98□□□□□ -0.01
GPC4-201ENST00000370828 DCTN1Q14203 1278 aa14.98□□□□□ -0.01
GPC4-201ENST00000370828 BMS1Q14692 1282 aaKnown RBP14.98□□□□□ -0.01
GPC4-201ENST00000370828 PDRG1Q9NUG6 133 aa14.98□□□□□ -0.01
GPC4-201ENST00000370828 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.98□□□□□ -0.01
GPC4-201ENST00000370828 V9GYY5 206 aaPredicted RBP14.98□□□□□ -0.01
GPC4-201ENST00000370828 SMARCA4P51532 1647 aa14.97□□□□□ -0.01
GPC4-201ENST00000370828 LMAN1P49257 510 aa14.97□□□□□ -0.01
GPC4-201ENST00000370828 HS1BP3Q53T59 392 aa14.97□□□□□ -0.01
GPC4-201ENST00000370828 TMCO5BA8MYB1 307 aa14.97□□□□□ -0.01
GPC4-201ENST00000370828 TEFQ10587 303 aa14.97□□□□□ -0.01
GPC4-201ENST00000370828 BANK1Q8NDB2 785 aa14.97□□□□□ -0.01
GPC4-201ENST00000370828 TIAM1Q13009 1591 aa14.96□□□□□ -0.01
GPC4-201ENST00000370828 DHX8Q14562 1220 aaKnown RBP14.96□□□□□ -0.01
GPC4-201ENST00000370828 LARP6Q9BRS8 491 aaKnown RBP14.96□□□□□ -0.01
GPC4-201ENST00000370828 SAFBQ15424 915 aaKnown RBP eCLIP14.96□□□□□ -0.01
GPC4-201ENST00000370828 CEP135Q66GS9 1140 aa14.96□□□□□ -0.01
GPC4-201ENST00000370828 MARCH6O60337 910 aa14.96□□□□□ -0.01
GPC4-201ENST00000370828 SLC4A2P04920 1241 aa14.96□□□□□ -0.01
GPC4-201ENST00000370828 UVSSAQ2YD98 709 aa14.96□□□□□ -0.01
GPC4-201ENST00000370828 GIMAP6Q6P9H5 292 aa14.96□□□□□ -0.01
GPC4-201ENST00000370828 SMARCE1Q969G3 411 aa14.96□□□□□ -0.01
GPC4-201ENST00000370828 VGFO15240 615 aaPredicted RBP14.96□□□□□ -0.02
GPC4-201ENST00000370828 NEXNQ0ZGT2 675 aa14.96□□□□□ -0.02
GPC4-201ENST00000370828 IL1RAPL2Q9NP60 686 aa14.96□□□□□ -0.02
GPC4-201ENST00000370828 RAB3GAP1Q15042 981 aa14.95□□□□□ -0.02
GPC4-201ENST00000370828 CWC27Q6UX04 472 aaKnown RBP14.95□□□□□ -0.02
GPC4-201ENST00000370828 RALYLQ86SE5 291 aaKnown RBP14.95□□□□□ -0.02
GPC4-201ENST00000370828 ERICH3Q5RHP9 1530 aa14.95□□□□□ -0.02
GPC4-201ENST00000370828 SETSIPP0DME0 302 aa14.95□□□□□ -0.02
GPC4-201ENST00000370828 SARNPP82979 210 aaKnown RBP14.95□□□□□ -0.02
GPC4-201ENST00000370828 FILIP1LQ4L180 1135 aa14.95□□□□□ -0.02
GPC4-201ENST00000370828 BMP2KLQ5H9B9 411 aa14.95□□□□□ -0.02
GPC4-201ENST00000370828 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.95□□□□□ -0.02
GPC4-201ENST00000370828 TRIM27P14373 513 aa14.95□□□□□ -0.02
GPC4-201ENST00000370828 PPFIBP1Q86W92 1011 aa14.95□□□□□ -0.02
GPC4-201ENST00000370828 MRVI1Q9Y6F6 885 aa14.95□□□□□ -0.02
GPC4-201ENST00000370828 PLEKHH2Q8IVE3 1493 aa14.95□□□□□ -0.02
GPC4-201ENST00000370828 GAS2L2Q8NHY3 880 aa14.95□□□□□ -0.02
GPC4-201ENST00000370828 DDX54Q8TDD1 881 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms