RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 PPLO60437 1756 aa13.06□□□□□ -0.32
LYSMD1-201ENST00000368908 IPO8O15397 1037 aaKnown RBP13.05□□□□□ -0.32
LYSMD1-201ENST00000368908 BAG4O95429 457 aaKnown RBP13.05□□□□□ -0.32
LYSMD1-201ENST00000368908 EXOSC9Q06265 439 aaKnown RBP13.05□□□□□ -0.32
LYSMD1-201ENST00000368908 NOL7Q9UMY1 257 aaKnown RBP13.05□□□□□ -0.32
LYSMD1-201ENST00000368908 ANKRD26Q9UPS8 1709 aa13.05□□□□□ -0.32
LYSMD1-201ENST00000368908 ADGRF5Q8IZF2 1346 aa13.05□□□□□ -0.32
LYSMD1-201ENST00000368908 SSFA2P28290 1259 aa13.05□□□□□ -0.32
LYSMD1-201ENST00000368908 MCM5P33992 734 aa13.05□□□□□ -0.32
LYSMD1-201ENST00000368908 DDX49Q9Y6V7 483 aaKnown RBP13.05□□□□□ -0.32
LYSMD1-201ENST00000368908 TMEM57Q8N5G2 664 aa13.04□□□□□ -0.32
LYSMD1-201ENST00000368908 SENP3Q9H4L4 574 aaPredicted RBP13.04□□□□□ -0.32
LYSMD1-201ENST00000368908 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
LYSMD1-201ENST00000368908 ADGRB1O14514 1584 aa13.04□□□□□ -0.32
LYSMD1-201ENST00000368908 ALDH1L2Q3SY69 923 aa13.04□□□□□ -0.32
LYSMD1-201ENST00000368908 GCC1Q96CN9 775 aa13.04□□□□□ -0.32
LYSMD1-201ENST00000368908 CFAP44Q96MT7 982 aa13.04□□□□□ -0.32
LYSMD1-201ENST00000368908 BRPF1P55201 1214 aaPredicted RBP13.03□□□□□ -0.32
LYSMD1-201ENST00000368908 CSPP1Q1MSJ5 1256 aa13.03□□□□□ -0.32
LYSMD1-201ENST00000368908 CHMP4BQ9H444 224 aaKnown RBP13.03□□□□□ -0.32
LYSMD1-201ENST00000368908 CD2BP2O95400 341 aaKnown RBP13.03□□□□□ -0.32
LYSMD1-201ENST00000368908 NUCB2P80303 420 aa13.03□□□□□ -0.32
LYSMD1-201ENST00000368908 GAS2L2Q8NHY3 880 aa13.03□□□□□ -0.32
LYSMD1-201ENST00000368908 LNPKQ9C0E8 428 aa13.03□□□□□ -0.32
LYSMD1-201ENST00000368908 NOB1Q9ULX3 412 aaKnown RBP13.03□□□□□ -0.32
LYSMD1-201ENST00000368908 TMEM131LA2VDJ0 1609 aa13.03□□□□□ -0.32
LYSMD1-201ENST00000368908 ANKRD36BQ8N2N9 1353 aa13.03□□□□□ -0.32
LYSMD1-201ENST00000368908 TSR2Q969E8 191 aaKnown RBP13.02□□□□□ -0.32
LYSMD1-201ENST00000368908 U2AF1L5P0DN76 240 aaPredicted RBP13.02□□□□□ -0.33
LYSMD1-201ENST00000368908 U2AF1Q01081 240 aaKnown RBP eCLIP13.02□□□□□ -0.33
LYSMD1-201ENST00000368908 PRDM4Q9UKN5 801 aa13.02□□□□□ -0.33
LYSMD1-201ENST00000368908 PIK3R4Q99570 1358 aa13.02□□□□□ -0.33
LYSMD1-201ENST00000368908 SLIT1O75093 1534 aa13.02□□□□□ -0.33
LYSMD1-201ENST00000368908 DYNC1I1O14576 645 aa13.01□□□□□ -0.33
LYSMD1-201ENST00000368908 CYP2E1P05181 493 aaPredicted RBP13.01□□□□□ -0.33
LYSMD1-201ENST00000368908 TBC1D9Q6ZT07 1266 aa13.01□□□□□ -0.33
LYSMD1-201ENST00000368908 ZNF428Q96B54 188 aa13.01□□□□□ -0.33
LYSMD1-201ENST00000368908 PLEKHF1Q96S99 279 aa13.01□□□□□ -0.33
LYSMD1-201ENST00000368908 AK9Q5TCS8 1911 aa13.01□□□□□ -0.33
LYSMD1-201ENST00000368908 TMPOP42166 694 aaKnown RBP13.01□□□□□ -0.33
LYSMD1-201ENST00000368908 TNNT2P45379 298 aaPredicted RBP13.01□□□□□ -0.33
LYSMD1-201ENST00000368908 RABEP1Q15276 862 aa13.01□□□□□ -0.33
LYSMD1-201ENST00000368908 TRIM35Q9UPQ4 493 aa13.01□□□□□ -0.33
LYSMD1-201ENST00000368908 PPIP5K1Q6PFW1 1433 aa13.01□□□□□ -0.33
LYSMD1-201ENST00000368908 ARHGAP23Q9P227 1491 aa13.01□□□□□ -0.33
LYSMD1-201ENST00000368908 ZSCAN23Q3MJ62 389 aa13□□□□□ -0.33
LYSMD1-201ENST00000368908 SMAP1Q8IYB5 467 aaPredicted RBP13□□□□□ -0.33
LYSMD1-201ENST00000368908 THEMISQ8N1K5 641 aaPredicted RBP13□□□□□ -0.33
LYSMD1-201ENST00000368908 SLC12A5Q9H2X9 1139 aa13□□□□□ -0.33
LYSMD1-201ENST00000368908 ARHGEF28Q8N1W1 1705 aaKnown RBP13□□□□□ -0.33
LYSMD1-201ENST00000368908 PTCH1Q13635 1447 aa13□□□□□ -0.33
LYSMD1-201ENST00000368908 CDC45O75419 566 aa13□□□□□ -0.33
LYSMD1-201ENST00000368908 IDI1Q13907 227 aa13□□□□□ -0.33
LYSMD1-201ENST00000368908 ZKSCAN5Q9Y2L8 839 aa13□□□□□ -0.33
LYSMD1-201ENST00000368908 CDC42BPGQ6DT37 1551 aa12.99□□□□□ -0.33
LYSMD1-201ENST00000368908 PLEKHG5O94827 1062 aa12.99□□□□□ -0.33
LYSMD1-201ENST00000368908 LMBRD1Q9NUN5 540 aa12.99□□□□□ -0.33
LYSMD1-201ENST00000368908 R3HCC1Q9Y3T6 440 aaKnown RBP12.99□□□□□ -0.33
LYSMD1-201ENST00000368908 MYO5BQ9ULV0 1848 aa12.99□□□□□ -0.33
LYSMD1-201ENST00000368908 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.99□□□□□ -0.33
LYSMD1-201ENST00000368908 TULP4Q9NRJ4 1543 aa12.99□□□□□ -0.33
LYSMD1-201ENST00000368908 CWC22Q9HCG8 908 aaKnown RBP12.98□□□□□ -0.33
LYSMD1-201ENST00000368908 STRCQ7RTU9 1775 aa12.98□□□□□ -0.33
LYSMD1-201ENST00000368908 UQCRHLA0A096LP55 91 aa12.98□□□□□ -0.33
LYSMD1-201ENST00000368908 UQCRHP07919 91 aa12.98□□□□□ -0.33
LYSMD1-201ENST00000368908 RBSNQ9H1K0 784 aa12.97□□□□□ -0.33
LYSMD1-201ENST00000368908 FOXD4L1Q9NU39 408 aa12.97□□□□□ -0.33
LYSMD1-201ENST00000368908 CCDC39Q9UFE4 941 aa12.97□□□□□ -0.33
LYSMD1-201ENST00000368908 SASS6Q6UVJ0 657 aa12.97□□□□□ -0.33
LYSMD1-201ENST00000368908 ARHGAP45Q92619 1136 aa12.97□□□□□ -0.33
LYSMD1-201ENST00000368908 RBM10P98175 930 aaKnown RBP12.96□□□□□ -0.33
LYSMD1-201ENST00000368908 MCTP1Q6DN14 999 aa12.96□□□□□ -0.33
LYSMD1-201ENST00000368908 CAVIN1Q6NZI2 390 aaKnown RBP12.96□□□□□ -0.33
LYSMD1-201ENST00000368908 RBM42Q9BTD8 480 aaKnown RBP12.96□□□□□ -0.33
LYSMD1-201ENST00000368908 C14orf93Q9H972 538 aaKnown RBP12.96□□□□□ -0.33
LYSMD1-201ENST00000368908 TMEM2Q9UHN6 1383 aa12.96□□□□□ -0.33
LYSMD1-201ENST00000368908 ANKRD45Q5TZF3 282 aa12.96□□□□□ -0.34
LYSMD1-201ENST00000368908 FAM13BQ9NYF5 915 aa12.95□□□□□ -0.34
LYSMD1-201ENST00000368908 ZBTB7BO15156 539 aaPredicted RBP12.95□□□□□ -0.34
LYSMD1-201ENST00000368908 NUTM2DQ5VT03 806 aaPredicted RBP12.95□□□□□ -0.34
LYSMD1-201ENST00000368908 STAG3Q9UJ98 1225 aa12.95□□□□□ -0.34
LYSMD1-201ENST00000368908 ZFYVE9O95405 1425 aa12.94□□□□□ -0.34
LYSMD1-201ENST00000368908 LRSAM1Q6UWE0 723 aa12.94□□□□□ -0.34
LYSMD1-201ENST00000368908 EVC2Q86UK5 1308 aa12.94□□□□□ -0.34
LYSMD1-201ENST00000368908 KIF24Q5T7B8 1368 aa12.94□□□□□ -0.34
LYSMD1-201ENST00000368908 HSPA2P54652 639 aa12.94□□□□□ -0.34
LYSMD1-201ENST00000368908 XPCQ01831 940 aaPredicted RBP12.94□□□□□ -0.34
LYSMD1-201ENST00000368908 PRIM1P49642 420 aaKnown RBP12.93□□□□□ -0.34
LYSMD1-201ENST00000368908 RIMS2Q9UQ26 1411 aa12.93□□□□□ -0.34
LYSMD1-201ENST00000368908 HDGFP51858 240 aaKnown RBP12.93□□□□□ -0.34
LYSMD1-201ENST00000368908 ANKLE2Q86XL3 938 aa12.93□□□□□ -0.34
LYSMD1-201ENST00000368908 TRAK1Q9UPV9 953 aa12.93□□□□□ -0.34
LYSMD1-201ENST00000368908 RPGRIP1LQ68CZ1 1315 aa12.92□□□□□ -0.34
LYSMD1-201ENST00000368908 NEXMIFQ5QGS0 1516 aa12.92□□□□□ -0.34
LYSMD1-201ENST00000368908 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.92□□□□□ -0.34
LYSMD1-201ENST00000368908 PODXL2Q9NZ53 605 aa12.92□□□□□ -0.34
LYSMD1-201ENST00000368908 ABCC4O15439 1325 aa12.92□□□□□ -0.34
LYSMD1-201ENST00000368908 UTP14CQ5TAP6 766 aaKnown RBP12.91□□□□□ -0.34
LYSMD1-201ENST00000368908 LRRC7Q96NW7 1537 aa12.91□□□□□ -0.34
LYSMD1-201ENST00000368908 KNDC1Q76NI1 1749 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms