RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 GNL3LQ9NVN8 582 aaKnown RBP21.56■■□□□ 1.04
SNX27-202ENST00000368841 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.55■■□□□ 1.04
SNX27-202ENST00000368841 RAD54L2Q9Y4B4 1467 aa21.55■■□□□ 1.04
SNX27-202ENST00000368841 GNAI3P08754 354 aa21.55■■□□□ 1.04
SNX27-202ENST00000368841 MPHOSPH8Q99549 860 aa21.55■■□□□ 1.04
SNX27-202ENST00000368841 TNMDQ9H2S6 317 aa21.55■■□□□ 1.04
SNX27-202ENST00000368841 IL1RAPL2Q9NP60 686 aa21.55■■□□□ 1.04
SNX27-202ENST00000368841 SEPT7Q16181 437 aaKnown RBP21.54■■□□□ 1.04
SNX27-202ENST00000368841 MYCNP04198 464 aaPredicted RBP21.54■■□□□ 1.04
SNX27-202ENST00000368841 SSR1P43307 286 aaKnown RBP21.54■■□□□ 1.04
SNX27-202ENST00000368841 FANCIQ9NVI1 1328 aa21.54■■□□□ 1.04
SNX27-202ENST00000368841 CCDC181Q5TID7 509 aa21.54■■□□□ 1.04
SNX27-202ENST00000368841 MYO6Q9UM54 1294 aa21.54■■□□□ 1.04
SNX27-202ENST00000368841 HSP90AB3PQ58FF7 597 aa21.54■■□□□ 1.04
SNX27-202ENST00000368841 RAI14Q9P0K7 980 aa21.54■■□□□ 1.04
SNX27-202ENST00000368841 CYP46A1Q9Y6A2 500 aa21.53■■□□□ 1.04
SNX27-202ENST00000368841 CCDC191Q8NCU4 936 aa21.53■■□□□ 1.04
SNX27-202ENST00000368841 LRRCC1Q9C099 1032 aa21.53■■□□□ 1.04
SNX27-202ENST00000368841 CABP1Q9NZU7 370 aa21.53■■□□□ 1.04
SNX27-202ENST00000368841 TDO2P48775 406 aa21.53■■□□□ 1.04
SNX27-202ENST00000368841 AFAP1Q8N556 730 aa21.53■■□□□ 1.04
SNX27-202ENST00000368841 AKNAQ7Z591 1439 aa21.53■■□□□ 1.04
SNX27-202ENST00000368841 NUTM1Q86Y26 1132 aa21.53■■□□□ 1.04
SNX27-202ENST00000368841 RDXP35241 583 aaKnown RBP21.52■■□□□ 1.04
SNX27-202ENST00000368841 NBPF1Q3BBV0 1214 aa21.52■■□□□ 1.04
SNX27-202ENST00000368841 DCTN1Q14203 1278 aa21.52■■□□□ 1.04
SNX27-202ENST00000368841 ZNF530Q6P9A1 599 aaPredicted RBP21.52■■□□□ 1.04
SNX27-202ENST00000368841 CCDC57Q2TAC2 916 aa21.52■■□□□ 1.04
SNX27-202ENST00000368841 SLC12A5Q9H2X9 1139 aa21.52■■□□□ 1.04
SNX27-202ENST00000368841 DDX11Q96FC9 970 aa21.52■■□□□ 1.04
SNX27-202ENST00000368841 TMX1Q9H3N1 280 aa21.52■■□□□ 1.04
SNX27-202ENST00000368841 ZNF219Q9P2Y4 722 aaPredicted RBP21.52■■□□□ 1.04
SNX27-202ENST00000368841 C11orf95C9JLR9 678 aaPredicted RBP21.52■■□□□ 1.04
SNX27-202ENST00000368841 CT47B1P0C2W7 299 aaPredicted RBP21.52■■□□□ 1.04
SNX27-202ENST00000368841 ZNF76P36508 570 aa21.52■■□□□ 1.04
SNX27-202ENST00000368841 SOGA3Q5TF21 947 aa21.52■■□□□ 1.03
SNX27-202ENST00000368841 CAMK4Q16566 473 aa21.51■■□□□ 1.03
SNX27-202ENST00000368841 PPFIBP1Q86W92 1011 aa21.51■■□□□ 1.03
SNX27-202ENST00000368841 BTBD11A6QL63 1104 aa21.51■■□□□ 1.03
SNX27-202ENST00000368841 MRE11P49959 708 aa21.51■■□□□ 1.03
SNX27-202ENST00000368841 SLC4A8Q2Y0W8 1093 aa21.51■■□□□ 1.03
SNX27-202ENST00000368841 WASHC2AQ641Q2 1341 aa21.5■■□□□ 1.03
SNX27-202ENST00000368841 MAPK8IP2Q13387 824 aaPredicted RBP21.5■■□□□ 1.03
SNX27-202ENST00000368841 ZNHIT6Q9NWK9 470 aaKnown RBP21.5■■□□□ 1.03
SNX27-202ENST00000368841 LETM1O95202 739 aaPredicted RBP21.5■■□□□ 1.03
SNX27-202ENST00000368841 DHX8Q14562 1220 aaKnown RBP21.5■■□□□ 1.03
SNX27-202ENST00000368841 ERCC4Q92889 916 aaPredicted RBP21.49■■□□□ 1.03
SNX27-202ENST00000368841 ERC1Q8IUD2 1116 aa21.49■■□□□ 1.03
SNX27-202ENST00000368841 JAKMIP1Q96N16 626 aaKnown RBP21.49■■□□□ 1.03
SNX27-202ENST00000368841 CCDC97Q96F63 343 aaPredicted RBP21.49■■□□□ 1.03
SNX27-202ENST00000368841 HIP1O00291 1037 aa21.48■■□□□ 1.03
SNX27-202ENST00000368841 TAF3Q5VWG9 929 aa21.48■■□□□ 1.03
SNX27-202ENST00000368841 TRIM22Q8IYM9 498 aa21.47■■□□□ 1.03
SNX27-202ENST00000368841 IL27Q8NEV9 243 aa21.47■■□□□ 1.03
SNX27-202ENST00000368841 IDH1O75874 414 aaKnown RBP21.47■■□□□ 1.03
SNX27-202ENST00000368841 PPM1FP49593 454 aaPredicted RBP21.47■■□□□ 1.03
SNX27-202ENST00000368841 LARP1BQ659C4 914 aaKnown RBP21.47■■□□□ 1.03
SNX27-202ENST00000368841 ZC3H6P61129 1189 aaKnown RBP21.47■■□□□ 1.03
SNX27-202ENST00000368841 SMARCA5O60264 1052 aaPredicted RBP21.47■■□□□ 1.03
SNX27-202ENST00000368841 TRMT1LQ7Z2T5 733 aaKnown RBP21.47■■□□□ 1.03
SNX27-202ENST00000368841 NACAP1Q9BZK3 213 aa21.46■■□□□ 1.03
SNX27-202ENST00000368841 PDRG1Q9NUG6 133 aa21.46■■□□□ 1.03
SNX27-202ENST00000368841 LRP2BPQ9P2M1 347 aa21.46■■□□□ 1.03
SNX27-202ENST00000368841 NEBLO76041 1014 aa21.46■■□□□ 1.03
SNX27-202ENST00000368841 USHBP1Q8N6Y0 703 aa21.46■■□□□ 1.03
SNX27-202ENST00000368841 SLC26A8Q96RN1 970 aa21.46■■□□□ 1.03
SNX27-202ENST00000368841 LEKR1Q6ZMV7 388 aa21.45■■□□□ 1.03
SNX27-202ENST00000368841 ABCF2Q9UG63 623 aa21.45■■□□□ 1.03
SNX27-202ENST00000368841 MYOM3Q5VTT5 1437 aa21.45■■□□□ 1.02
SNX27-202ENST00000368841 SRGAP3O43295 1099 aa21.45■■□□□ 1.02
SNX27-202ENST00000368841 LRRFIP2Q9Y608 721 aaKnown RBP21.45■■□□□ 1.02
SNX27-202ENST00000368841 GOLGA6L10A6NI86 522 aa21.44■■□□□ 1.02
SNX27-202ENST00000368841 ERLIN2O94905 339 aa21.44■■□□□ 1.02
SNX27-202ENST00000368841 LARP6Q9BRS8 491 aaKnown RBP21.43■■□□□ 1.02
SNX27-202ENST00000368841 STIM1Q13586 685 aa21.43■■□□□ 1.02
SNX27-202ENST00000368841 SPATA32Q96LK8 384 aa21.43■■□□□ 1.02
SNX27-202ENST00000368841 ERICH4A6NGS2 130 aa21.43■■□□□ 1.02
SNX27-202ENST00000368841 DNA2P51530 1060 aa21.43■■□□□ 1.02
SNX27-202ENST00000368841 RABEP1Q15276 862 aa21.43■■□□□ 1.02
SNX27-202ENST00000368841 UBAC1Q9BSL1 405 aa21.43■■□□□ 1.02
SNX27-202ENST00000368841 CWC15Q9P013 229 aaKnown RBP21.43■■□□□ 1.02
SNX27-202ENST00000368841 AQRO60306 1485 aaKnown RBP eCLIP21.43■■□□□ 1.02
SNX27-202ENST00000368841 SPG7Q9UQ90 795 aa21.43■■□□□ 1.02
SNX27-202ENST00000368841 LIG1P18858 919 aa21.42■■□□□ 1.02
SNX27-202ENST00000368841 SRCIN1Q9C0H9 1055 aa21.42■■□□□ 1.02
SNX27-202ENST00000368841 SKAP1Q86WV1 359 aa21.42■■□□□ 1.02
SNX27-202ENST00000368841 GAPVD1Q14C86 1478 aa21.42■■□□□ 1.02
SNX27-202ENST00000368841 CCDC192P0DO97 292 aa21.42■■□□□ 1.02
SNX27-202ENST00000368841 GUCY1B3Q02153 619 aa21.42■■□□□ 1.02
SNX27-202ENST00000368841 CASTP20810 708 aaKnown RBP21.41■■□□□ 1.02
SNX27-202ENST00000368841 CCDC82Q8N4S0 544 aa21.41■■□□□ 1.02
SNX27-202ENST00000368841 FGD6Q6ZV73 1430 aa21.41■■□□□ 1.02
SNX27-202ENST00000368841 THUMPD2Q9BTF0 503 aaKnown RBP21.41■■□□□ 1.02
SNX27-202ENST00000368841 MINDY4BA8MYZ0 360 aa21.41■■□□□ 1.02
SNX27-202ENST00000368841 K7ELQ4 463 aaPredicted RBP21.4■■□□□ 1.02
SNX27-202ENST00000368841 PTCD1O75127 700 aaKnown RBP21.4■■□□□ 1.02
SNX27-202ENST00000368841 ANKRD50Q9ULJ7 1429 aa21.4■■□□□ 1.02
SNX27-202ENST00000368841 GCC1Q96CN9 775 aa21.4■■□□□ 1.02
SNX27-202ENST00000368841 UBA5Q9GZZ9 404 aa21.4■■□□□ 1.02
SNX27-202ENST00000368841 PDCP20941 246 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms