RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 SPATA31A1Q5TZJ5 1347 aa25.56■■□□□ 1.68
CHTOP-202ENST00000368687 CGNL1Q0VF96 1302 aa25.55■■□□□ 1.68
CHTOP-202ENST00000368687 FYB1O15117 783 aa25.54■■□□□ 1.68
CHTOP-202ENST00000368687 THRAP3Q9Y2W1 955 aaKnown RBP25.54■■□□□ 1.68
CHTOP-202ENST00000368687 CRB1P82279 1406 aa25.54■■□□□ 1.68
CHTOP-202ENST00000368687 FAM98CQ17RN3 349 aaKnown RBP25.53■■□□□ 1.68
CHTOP-202ENST00000368687 BRWD3Q6RI45 1802 aa25.53■■□□□ 1.68
CHTOP-202ENST00000368687 CARD14Q9BXL6 1004 aa25.52■■□□□ 1.68
CHTOP-202ENST00000368687 THSD7AQ9UPZ6 1657 aa25.52■■□□□ 1.68
CHTOP-202ENST00000368687 BARGINQ6ZT62 677 aa25.51■■□□□ 1.67
CHTOP-202ENST00000368687 WDR17Q8IZU2 1322 aa25.51■■□□□ 1.67
CHTOP-202ENST00000368687 BLMP54132 1417 aaPredicted RBP25.51■■□□□ 1.67
CHTOP-202ENST00000368687 RGPD5Q99666 1765 aa25.51■■□□□ 1.67
CHTOP-202ENST00000368687 LARP1Q6PKG0 1096 aaKnown RBP25.5■■□□□ 1.67
CHTOP-202ENST00000368687 TCP11L2Q8N4U5 519 aa25.5■■□□□ 1.67
CHTOP-202ENST00000368687 KIF7Q2M1P5 1343 aa25.49■■□□□ 1.67
CHTOP-202ENST00000368687 A0A0G2JS52 829 aa25.49■■□□□ 1.67
CHTOP-202ENST00000368687 MYT1Q01538 1121 aa25.49■■□□□ 1.67
CHTOP-202ENST00000368687 RTL1A6NKG5 1358 aa25.48■■□□□ 1.67
CHTOP-202ENST00000368687 GGNBP2Q9H3C7 697 aa25.48■■□□□ 1.67
CHTOP-202ENST00000368687 NSD2O96028 1365 aa25.47■■□□□ 1.67
CHTOP-202ENST00000368687 ANKRD26Q9UPS8 1709 aa25.47■■□□□ 1.67
CHTOP-202ENST00000368687 KRT27Q7Z3Y8 459 aa25.47■■□□□ 1.67
CHTOP-202ENST00000368687 AXIN2Q9Y2T1 843 aa25.47■■□□□ 1.67
CHTOP-202ENST00000368687 FAM208AQ9UK61 1670 aaKnown RBP25.47■■□□□ 1.67
CHTOP-202ENST00000368687 KIF24Q5T7B8 1368 aa25.46■■□□□ 1.67
CHTOP-202ENST00000368687 C11orf95C9JLR9 678 aaPredicted RBP25.46■■□□□ 1.67
CHTOP-202ENST00000368687 TOM1L2Q6ZVM7 507 aa25.46■■□□□ 1.67
CHTOP-202ENST00000368687 PANK3Q9H999 370 aa25.46■■□□□ 1.67
CHTOP-202ENST00000368687 CSB-PGBD3P0DP91 1061 aa25.45■■□□□ 1.66
CHTOP-202ENST00000368687 USP35Q9P2H5 1018 aa25.45■■□□□ 1.66
CHTOP-202ENST00000368687 ERBB3P21860 1342 aa25.44■■□□□ 1.66
CHTOP-202ENST00000368687 IP6K1Q92551 441 aa25.44■■□□□ 1.66
CHTOP-202ENST00000368687 CCDC125Q86Z20 511 aa25.43■■□□□ 1.66
CHTOP-202ENST00000368687 CDCA7Q9BWT1 371 aaPredicted RBP25.43■■□□□ 1.66
CHTOP-202ENST00000368687 PARP4Q9UKK3 1724 aaKnown RBP25.43■■□□□ 1.66
CHTOP-202ENST00000368687 CCDC7Q96M83 1385 aa25.43■■□□□ 1.66
CHTOP-202ENST00000368687 MAP3K19Q56UN5 1328 aa25.42■■□□□ 1.66
CHTOP-202ENST00000368687 AMPHP49418 695 aa25.42■■□□□ 1.66
CHTOP-202ENST00000368687 CARD10Q9BWT7 1032 aa25.42■■□□□ 1.66
CHTOP-202ENST00000368687 WNK3Q9BYP7 1800 aa25.42■■□□□ 1.66
CHTOP-202ENST00000368687 KNSTRNQ9Y448 316 aa25.4■■□□□ 1.66
CHTOP-202ENST00000368687 HOXC9P31274 260 aa25.38■■□□□ 1.65
CHTOP-202ENST00000368687 ANKRD24Q8TF21 1146 aa25.38■■□□□ 1.65
CHTOP-202ENST00000368687 SMG6Q86US8 1419 aaKnown RBP25.37■■□□□ 1.65
CHTOP-202ENST00000368687 FLT4P35916 1363 aa25.37■■□□□ 1.65
CHTOP-202ENST00000368687 FAM182BQ5T319 152 aa25.37■■□□□ 1.65
CHTOP-202ENST00000368687 ZEB1P37275 1124 aaPredicted RBP25.35■■□□□ 1.65
CHTOP-202ENST00000368687 PDE3BQ13370 1112 aa25.35■■□□□ 1.65
CHTOP-202ENST00000368687 WASHC2AQ641Q2 1341 aa25.35■■□□□ 1.65
CHTOP-202ENST00000368687 RRS1Q15050 365 aaKnown RBP25.34■■□□□ 1.65
CHTOP-202ENST00000368687 NLRP2Q9NX02 1062 aa25.34■■□□□ 1.65
CHTOP-202ENST00000368687 MAP2P11137 1827 aaKnown RBP25.34■■□□□ 1.65
CHTOP-202ENST00000368687 DEFB132Q7Z7B7 95 aa25.33■■□□□ 1.65
CHTOP-202ENST00000368687 LRRC37A3O60309 1634 aa25.33■■□□□ 1.65
CHTOP-202ENST00000368687 INSRP06213 1382 aa25.32■■□□□ 1.64
CHTOP-202ENST00000368687 DISP2A7MBM2 1401 aa25.31■■□□□ 1.64
CHTOP-202ENST00000368687 DDB1Q16531 1140 aa25.3■■□□□ 1.64
CHTOP-202ENST00000368687 FAM196AQ6ZSG2 479 aa25.3■■□□□ 1.64
CHTOP-202ENST00000368687 PEAK1Q9H792 1746 aa25.29■■□□□ 1.64
CHTOP-202ENST00000368687 SF3B2Q13435 895 aaKnown RBP25.29■■□□□ 1.64
CHTOP-202ENST00000368687 FBLN1P23142 703 aa25.28■■□□□ 1.64
CHTOP-202ENST00000368687 SRCAPQ6ZRS2 3230 aa25.28■■□□□ 1.64
CHTOP-202ENST00000368687 RGPD1P0DJD0 1748 aa25.28■■□□□ 1.64
CHTOP-202ENST00000368687 MORC1Q86VD1 984 aa25.27■■□□□ 1.64
CHTOP-202ENST00000368687 NPC1L1Q9UHC9 1359 aa25.27■■□□□ 1.64
CHTOP-202ENST00000368687 IL2RBP14784 551 aa25.26■■□□□ 1.63
CHTOP-202ENST00000368687 AMER1Q5JTC6 1135 aaPredicted RBP25.26■■□□□ 1.63
CHTOP-202ENST00000368687 LTV1Q96GA3 475 aaPredicted RBP25.26■■□□□ 1.63
CHTOP-202ENST00000368687 OVOS2A0A0G2JMS6 1433 aa25.26■■□□□ 1.63
CHTOP-202ENST00000368687 EMILIN1Q9Y6C2 1016 aa25.25■■□□□ 1.63
CHTOP-202ENST00000368687 TNS2Q63HR2 1409 aa25.25■■□□□ 1.63
CHTOP-202ENST00000368687 EXOC5O00471 708 aa25.24■■□□□ 1.63
CHTOP-202ENST00000368687 PER1O15534 1290 aaPredicted RBP25.24■■□□□ 1.63
CHTOP-202ENST00000368687 PPM1GO15355 546 aaPredicted RBP25.23■■□□□ 1.63
CHTOP-202ENST00000368687 HSP90AB2PQ58FF8 381 aa25.23■■□□□ 1.63
CHTOP-202ENST00000368687 POLKQ9UBT6 870 aa25.23■■□□□ 1.63
CHTOP-202ENST00000368687 BCL9O00512 1426 aa25.21■■□□□ 1.63
CHTOP-202ENST00000368687 RGPD2P0DJD1 1756 aa25.21■■□□□ 1.63
CHTOP-202ENST00000368687 TNNT2P45379 298 aaPredicted RBP25.21■■□□□ 1.63
CHTOP-202ENST00000368687 BAG6P46379 1132 aa25.2■■□□□ 1.62
CHTOP-202ENST00000368687 TRIM37O94972 964 aa25.19■■□□□ 1.62
CHTOP-202ENST00000368687 TNS1Q9HBL0 1735 aaKnown RBP25.18■■□□□ 1.62
CHTOP-202ENST00000368687 EN1Q05925 392 aaPredicted RBP25.17■■□□□ 1.62
CHTOP-202ENST00000368687 NBPF6Q5VWK0 638 aa25.16■■□□□ 1.62
CHTOP-202ENST00000368687 NBPF4Q96M43 638 aa25.16■■□□□ 1.62
CHTOP-202ENST00000368687 RAPGEF4Q8WZA2 1011 aa25.15■■□□□ 1.62
CHTOP-202ENST00000368687 SBF2Q86WG5 1849 aa25.14■■□□□ 1.62
CHTOP-202ENST00000368687 NCAPD2Q15021 1401 aa25.14■■□□□ 1.62
CHTOP-202ENST00000368687 PLEKHG2Q9H7P9 1386 aa25.14■■□□□ 1.61
CHTOP-202ENST00000368687 MARCH10Q8NA82 808 aaPredicted RBP25.13■■□□□ 1.61
CHTOP-202ENST00000368687 CC2D1BQ5T0F9 858 aaKnown RBP25.12■■□□□ 1.61
CHTOP-202ENST00000368687 PARD3Q8TEW0 1356 aa25.11■■□□□ 1.61
CHTOP-202ENST00000368687 MEGF6O75095 1541 aa25.11■■□□□ 1.61
CHTOP-202ENST00000368687 TATP17735 454 aaPredicted RBP25.1■■□□□ 1.61
CHTOP-202ENST00000368687 EZH2Q15910 746 aaKnown RBP25.09■■□□□ 1.61
CHTOP-202ENST00000368687 CAMKK2Q96RR4 588 aa25.09■■□□□ 1.61
CHTOP-202ENST00000368687 RGPD3A6NKT7 1758 aaPredicted RBP25.08■■□□□ 1.61
CHTOP-202ENST00000368687 RGPD4Q7Z3J3 1758 aa25.08■■□□□ 1.61
CHTOP-202ENST00000368687 APBA3O96018 575 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms