RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 FECHP22830 423 aa9.88□□□□□ -0.83
ECHDC1-202ENST00000368289 ZNF784Q8NCA9 323 aaPredicted RBP9.88□□□□□ -0.83
ECHDC1-202ENST00000368289 SLC4A5Q9BY07 1137 aa9.88□□□□□ -0.83
ECHDC1-202ENST00000368289 ADGBQ8N7X0 1667 aa9.87□□□□□ -0.83
ECHDC1-202ENST00000368289 TRIM6-TRIM34B2RNG4 842 aa9.87□□□□□ -0.83
ECHDC1-202ENST00000368289 PSEN2P49810 448 aa9.87□□□□□ -0.83
ECHDC1-202ENST00000368289 TTC13Q8NBP0 860 aa9.87□□□□□ -0.83
ECHDC1-202ENST00000368289 DDX17Q92841 729 aaKnown RBP9.87□□□□□ -0.83
ECHDC1-202ENST00000368289 PNPLA6Q8IY17 1366 aa9.87□□□□□ -0.83
ECHDC1-202ENST00000368289 TMEM2Q9UHN6 1383 aa9.87□□□□□ -0.83
ECHDC1-202ENST00000368289 ADAMTS2O95450 1211 aa9.86□□□□□ -0.83
ECHDC1-202ENST00000368289 FNBP4Q8N3X1 1017 aaPredicted RBP9.86□□□□□ -0.83
ECHDC1-202ENST00000368289 CCDC102AQ96A19 550 aa9.86□□□□□ -0.83
ECHDC1-202ENST00000368289 ZBED2Q9BTP6 218 aa9.86□□□□□ -0.83
ECHDC1-202ENST00000368289 NBPF26B4DH59 902 aa9.85□□□□□ -0.83
ECHDC1-202ENST00000368289 C1QTNF8P60827 252 aa9.85□□□□□ -0.83
ECHDC1-202ENST00000368289 RBM46Q8TBY0 533 aaKnown RBP9.85□□□□□ -0.83
ECHDC1-202ENST00000368289 USP21Q9UK80 565 aa9.85□□□□□ -0.83
ECHDC1-202ENST00000368289 AXIN2Q9Y2T1 843 aa9.85□□□□□ -0.83
ECHDC1-202ENST00000368289 POTEB3A0JP26 581 aa9.84□□□□□ -0.83
ECHDC1-202ENST00000368289 TRIM66O15016 1216 aa9.84□□□□□ -0.83
ECHDC1-202ENST00000368289 POTEBQ6S5H4 581 aa9.84□□□□□ -0.83
ECHDC1-202ENST00000368289 POTEEQ6S8J3 1075 aa9.84□□□□□ -0.83
ECHDC1-202ENST00000368289 TRPC5Q9UL62 973 aaPredicted RBP9.84□□□□□ -0.83
ECHDC1-202ENST00000368289 TK2O00142 265 aa9.83□□□□□ -0.84
ECHDC1-202ENST00000368289 TSKSQ9UJT2 592 aa9.83□□□□□ -0.84
ECHDC1-202ENST00000368289 EID1Q9Y6B2 187 aa9.83□□□□□ -0.84
ECHDC1-202ENST00000368289 CAMSAP2Q08AD1 1489 aa9.83□□□□□ -0.84
ECHDC1-202ENST00000368289 RTEL1-TNFRSF6BF6WH68 1400 aa9.82□□□□□ -0.84
ECHDC1-202ENST00000368289 DMRTA1Q5VZB9 504 aa9.82□□□□□ -0.84
ECHDC1-202ENST00000368289 RABGEF1Q9UJ41 708 aa9.82□□□□□ -0.84
ECHDC1-202ENST00000368289 ADGRG1Q9Y653 693 aa9.82□□□□□ -0.84
ECHDC1-202ENST00000368289 ARHGAP35Q9NRY4 1499 aa9.82□□□□□ -0.84
ECHDC1-202ENST00000368289 FMN1Q68DA7 1419 aa9.82□□□□□ -0.84
ECHDC1-202ENST00000368289 R3HDM1Q15032 1099 aaKnown RBP9.81□□□□□ -0.84
ECHDC1-202ENST00000368289 PROX2Q3B8N5 592 aa9.81□□□□□ -0.84
ECHDC1-202ENST00000368289 TATDN2Q93075 761 aa9.81□□□□□ -0.84
ECHDC1-202ENST00000368289 PNMA3Q9UL41 463 aa9.81□□□□□ -0.84
ECHDC1-202ENST00000368289 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.81□□□□□ -0.84
ECHDC1-202ENST00000368289 PDE4DQ08499 809 aa9.8□□□□□ -0.84
ECHDC1-202ENST00000368289 KIAA1468Q9P260 1216 aa9.8□□□□□ -0.84
ECHDC1-202ENST00000368289 ASXL1Q8IXJ9 1541 aa9.8□□□□□ -0.84
ECHDC1-202ENST00000368289 PCNTO95613 3336 aa9.79□□□□□ -0.84
ECHDC1-202ENST00000368289 LSM11P83369 360 aaKnown RBP eCLIP9.79□□□□□ -0.84
ECHDC1-202ENST00000368289 AMHR2Q16671 573 aa9.79□□□□□ -0.84
ECHDC1-202ENST00000368289 NUDT18Q6ZVK8 323 aa9.79□□□□□ -0.84
ECHDC1-202ENST00000368289 METTL3Q86U44 580 aaKnown RBP9.79□□□□□ -0.84
ECHDC1-202ENST00000368289 PXYLP1Q8TE99 480 aa9.79□□□□□ -0.84
ECHDC1-202ENST00000368289 LRRC59Q96AG4 307 aaKnown RBP9.79□□□□□ -0.84
ECHDC1-202ENST00000368289 NBPF3Q9H094 633 aa9.79□□□□□ -0.84
ECHDC1-202ENST00000368289 C19orf44Q9H6X5 657 aa9.79□□□□□ -0.84
ECHDC1-202ENST00000368289 CFDP1Q9UEE9 299 aaPredicted RBP9.79□□□□□ -0.84
ECHDC1-202ENST00000368289 FAM198AQ9UFP1 575 aa9.79□□□□□ -0.84
ECHDC1-202ENST00000368289 VPS9D1Q9Y2B5 631 aa9.79□□□□□ -0.84
ECHDC1-202ENST00000368289 NCOA3Q9Y6Q9 1424 aa9.79□□□□□ -0.84
ECHDC1-202ENST00000368289 PLEKHH2Q8IVE3 1493 aa9.79□□□□□ -0.84
ECHDC1-202ENST00000368289 CFAP65Q6ZU64 1925 aaKnown RBP9.78□□□□□ -0.84
ECHDC1-202ENST00000368289 NEUROD2Q15784 382 aa9.78□□□□□ -0.84
ECHDC1-202ENST00000368289 POTEGQ6S5H5 508 aa9.78□□□□□ -0.84
ECHDC1-202ENST00000368289 STAC3Q96MF2 364 aa9.78□□□□□ -0.84
ECHDC1-202ENST00000368289 PIK3C2BO00750 1634 aa9.78□□□□□ -0.84
ECHDC1-202ENST00000368289 MROH1Q8NDA8 1641 aa9.78□□□□□ -0.84
ECHDC1-202ENST00000368289 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.77□□□□□ -0.85
ECHDC1-202ENST00000368289 IDI1Q13907 227 aa9.77□□□□□ -0.85
ECHDC1-202ENST00000368289 GJD4Q96KN9 370 aaPredicted RBP9.77□□□□□ -0.85
ECHDC1-202ENST00000368289 EYA1Q99502 592 aa9.77□□□□□ -0.85
ECHDC1-202ENST00000368289 DAXXQ9UER7 740 aaPredicted RBP9.77□□□□□ -0.85
ECHDC1-202ENST00000368289 CHD2O14647 1828 aaKnown RBP9.77□□□□□ -0.85
ECHDC1-202ENST00000368289 POTEMA6NI47 508 aa9.76□□□□□ -0.85
ECHDC1-202ENST00000368289 CLCN1P35523 988 aa9.76□□□□□ -0.85
ECHDC1-202ENST00000368289 HDGFP51858 240 aaKnown RBP9.76□□□□□ -0.85
ECHDC1-202ENST00000368289 FAM161AQ3B820 660 aa9.76□□□□□ -0.85
ECHDC1-202ENST00000368289 ADGRD1Q6QNK2 874 aa9.76□□□□□ -0.85
ECHDC1-202ENST00000368289 GLI3P10071 1580 aa9.75□□□□□ -0.85
ECHDC1-202ENST00000368289 MST1RQ04912 1400 aa9.75□□□□□ -0.85
ECHDC1-202ENST00000368289 DNAJB2P25686 324 aa9.75□□□□□ -0.85
ECHDC1-202ENST00000368289 TTLL12Q14166 644 aaPredicted RBP9.75□□□□□ -0.85
ECHDC1-202ENST00000368289 ANKRD13DQ6ZTN6 518 aa9.75□□□□□ -0.85
ECHDC1-202ENST00000368289 LAPTM4BQ86VI4 370 aa9.75□□□□□ -0.85
ECHDC1-202ENST00000368289 ATF3P18847 181 aa9.74□□□□□ -0.85
ECHDC1-202ENST00000368289 BRPF1P55201 1214 aaPredicted RBP9.74□□□□□ -0.85
ECHDC1-202ENST00000368289 BRWD3Q6RI45 1802 aa9.74□□□□□ -0.85
ECHDC1-202ENST00000368289 CAMTA1Q9Y6Y1 1673 aa9.74□□□□□ -0.85
ECHDC1-202ENST00000368289 RCCD1A6NED2 376 aa9.73□□□□□ -0.85
ECHDC1-202ENST00000368289 MRPL50Q8N5N7 158 aaKnown RBP9.73□□□□□ -0.85
ECHDC1-202ENST00000368289 GPCPD1Q9NPB8 672 aa9.73□□□□□ -0.85
ECHDC1-202ENST00000368289 RALGAPBQ86X10 1494 aa9.72□□□□□ -0.85
ECHDC1-202ENST00000368289 UNC13BO14795 1591 aa9.72□□□□□ -0.85
ECHDC1-202ENST00000368289 BHMG1C9JSJ3 638 aaPredicted RBP9.72□□□□□ -0.85
ECHDC1-202ENST00000368289 SMAPO00193 183 aa9.72□□□□□ -0.85
ECHDC1-202ENST00000368289 SLC4A3P48751 1232 aa9.72□□□□□ -0.85
ECHDC1-202ENST00000368289 FAM98CQ17RN3 349 aaKnown RBP9.72□□□□□ -0.85
ECHDC1-202ENST00000368289 CDAN1Q8IWY9 1227 aa9.72□□□□□ -0.85
ECHDC1-202ENST00000368289 PTCH1Q13635 1447 aa9.72□□□□□ -0.85
ECHDC1-202ENST00000368289 EFCAB6Q5THR3 1501 aa9.72□□□□□ -0.85
ECHDC1-202ENST00000368289 MDM2Q00987 491 aaPredicted RBP9.71□□□□□ -0.86
ECHDC1-202ENST00000368289 C14orf37Q86TY3 774 aa9.71□□□□□ -0.86
ECHDC1-202ENST00000368289 ARHGAP31Q2M1Z3 1444 aa9.71□□□□□ -0.86
ECHDC1-202ENST00000368289 PTPRUQ92729 1446 aa9.71□□□□□ -0.86
ECHDC1-202ENST00000368289 GOLGA8CPA6NN73 597 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms