RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 GAS2L2Q8NHY3 880 aa8.42□□□□□ -1.06
SPTA1-201ENST00000368147 API5Q9BZZ5 524 aaKnown RBP8.42□□□□□ -1.06
SPTA1-201ENST00000368147 CCDC175P0C221 793 aa8.42□□□□□ -1.06
SPTA1-201ENST00000368147 LIG1P18858 919 aa8.42□□□□□ -1.06
SPTA1-201ENST00000368147 SYCP1Q15431 976 aa8.42□□□□□ -1.06
SPTA1-201ENST00000368147 VTI1AQ96AJ9 217 aa8.42□□□□□ -1.06
SPTA1-201ENST00000368147 TSPYL1Q9H0U9 437 aa8.42□□□□□ -1.06
SPTA1-201ENST00000368147 SLC4A2P04920 1241 aa8.41□□□□□ -1.06
SPTA1-201ENST00000368147 SASS6Q6UVJ0 657 aa8.41□□□□□ -1.06
SPTA1-201ENST00000368147 SSBP05455 408 aaKnown RBP eCLIP8.41□□□□□ -1.06
SPTA1-201ENST00000368147 CRACR2BQ8N4Y2 399 aaPredicted RBP8.41□□□□□ -1.06
SPTA1-201ENST00000368147 HDGFL1Q5TGJ6 251 aa8.41□□□□□ -1.06
SPTA1-201ENST00000368147 DEF6Q9H4E7 631 aa8.41□□□□□ -1.06
SPTA1-201ENST00000368147 TDO2P48775 406 aa8.41□□□□□ -1.06
SPTA1-201ENST00000368147 TSR2Q969E8 191 aaKnown RBP8.41□□□□□ -1.06
SPTA1-201ENST00000368147 REC8O95072 547 aa8.41□□□□□ -1.06
SPTA1-201ENST00000368147 SNAPC4Q5SXM2 1469 aa8.41□□□□□ -1.06
SPTA1-201ENST00000368147 EZRP15311 586 aaKnown RBP8.4□□□□□ -1.06
SPTA1-201ENST00000368147 INTS3Q68E01 1043 aaKnown RBP8.4□□□□□ -1.06
SPTA1-201ENST00000368147 IGHMBP2P38935 993 aaKnown RBP8.4□□□□□ -1.06
SPTA1-201ENST00000368147 OLFM4Q6UX06 510 aa8.4□□□□□ -1.06
SPTA1-201ENST00000368147 PDCL3Q9H2J4 239 aa8.4□□□□□ -1.06
SPTA1-201ENST00000368147 NOB1Q9ULX3 412 aaKnown RBP8.4□□□□□ -1.06
SPTA1-201ENST00000368147 RTEL1-TNFRSF6BF6WH68 1400 aa8.4□□□□□ -1.06
SPTA1-201ENST00000368147 POGZQ7Z3K3 1410 aa8.4□□□□□ -1.06
SPTA1-201ENST00000368147 LEKR1Q6ZMV7 388 aa8.4□□□□□ -1.06
SPTA1-201ENST00000368147 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.4□□□□□ -1.064e-8■■■□□ 18
SPTA1-201ENST00000368147 TMOD2Q9NZR1 351 aa8.4□□□□□ -1.06
SPTA1-201ENST00000368147 SYNJ2O15056 1496 aa8.4□□□□□ -1.07
SPTA1-201ENST00000368147 RRP1P56182 461 aaKnown RBP8.4□□□□□ -1.07
SPTA1-201ENST00000368147 ATP6V1DQ9Y5K8 247 aa8.4□□□□□ -1.07
SPTA1-201ENST00000368147 PPM1EQ8WY54 764 aa8.4□□□□□ -1.07
SPTA1-201ENST00000368147 POLR3DP05423 398 aaPredicted RBP8.4□□□□□ -1.07
SPTA1-201ENST00000368147 TANGO6Q9C0B7 1094 aa8.4□□□□□ -1.07
SPTA1-201ENST00000368147 DHX37Q8IY37 1157 aaKnown RBP8.39□□□□□ -1.07
SPTA1-201ENST00000368147 GPTP24298 496 aa8.39□□□□□ -1.07
SPTA1-201ENST00000368147 CENPQQ7L2Z9 268 aaPredicted RBP8.39□□□□□ -1.07
SPTA1-201ENST00000368147 FMNL2Q96PY5 1086 aa8.39□□□□□ -1.07
SPTA1-201ENST00000368147 NEBLO76041 1014 aa8.39□□□□□ -1.07
SPTA1-201ENST00000368147 STARD3NLO95772 234 aa8.39□□□□□ -1.07
SPTA1-201ENST00000368147 SLC12A5Q9H2X9 1139 aa8.39□□□□□ -1.07
SPTA1-201ENST00000368147 HSP90AB4PQ58FF6 505 aa8.39□□□□□ -1.07
SPTA1-201ENST00000368147 CNTLNQ9NXG0 1405 aa8.39□□□□□ -1.07
SPTA1-201ENST00000368147 IDH1O75874 414 aaKnown RBP8.39□□□□□ -1.07
SPTA1-201ENST00000368147 FOXO3O43524 673 aa8.39□□□□□ -1.07
SPTA1-201ENST00000368147 BCAR3O75815 825 aa8.39□□□□□ -1.07
SPTA1-201ENST00000368147 MINDY4BA8MYZ0 360 aa8.38□□□□□ -1.07
SPTA1-201ENST00000368147 ERBINQ96RT1 1412 aa8.38□□□□□ -1.07
SPTA1-201ENST00000368147 WDHD1O75717 1129 aaPredicted RBP8.38□□□□□ -1.07
SPTA1-201ENST00000368147 MAGEC2Q9UBF1 373 aaPredicted RBP8.38□□□□□ -1.07
SPTA1-201ENST00000368147 C6orf229H3BNL8 230 aa8.38□□□□□ -1.07
SPTA1-201ENST00000368147 KIAA0754O94854 1291 aa8.38□□□□□ -1.07
SPTA1-201ENST00000368147 GIMAP7Q8NHV1 300 aa8.38□□□□□ -1.07
SPTA1-201ENST00000368147 SOGA3Q5TF21 947 aa8.38□□□□□ -1.07
SPTA1-201ENST00000368147 RRBP1Q9P2E9 1410 aaKnown RBP8.38□□□□□ -1.07
SPTA1-201ENST00000368147 PSMD1Q99460 953 aa8.38□□□□□ -1.07
SPTA1-201ENST00000368147 NF2P35240 595 aa8.38□□□□□ -1.07
SPTA1-201ENST00000368147 RFC4P35249 363 aa8.38□□□□□ -1.07
SPTA1-201ENST00000368147 RBM26Q5T8P6 1007 aaKnown RBP8.38□□□□□ -1.07
SPTA1-201ENST00000368147 TIMELESSQ9UNS1 1208 aa8.37□□□□□ -1.07
SPTA1-201ENST00000368147 METTL24Q5JXM2 366 aa8.37□□□□□ -1.07
SPTA1-201ENST00000368147 DDX11L8A8MPP1 907 aa8.37□□□□□ -1.07
SPTA1-201ENST00000368147 SSR1P43307 286 aaKnown RBP8.37□□□□□ -1.07
SPTA1-201ENST00000368147 AACSQ86V21 672 aa8.37□□□□□ -1.07
SPTA1-201ENST00000368147 ZNF652Q9Y2D9 606 aa8.37□□□□□ -1.07
SPTA1-201ENST00000368147 FYCO1Q9BQS8 1478 aa8.37□□□□□ -1.07
SPTA1-201ENST00000368147 ANKRD62A6NC57 917 aa8.37□□□□□ -1.07
SPTA1-201ENST00000368147 F8W031 263 aaPredicted RBP8.37□□□□□ -1.07
SPTA1-201ENST00000368147 TWISTNBQ3B726 338 aaPredicted RBP8.37□□□□□ -1.07
SPTA1-201ENST00000368147 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.37□□□□□ -1.07
SPTA1-201ENST00000368147 CUX1P39880 1505 aa8.37□□□□□ -1.07
SPTA1-201ENST00000368147 KIF21BO75037 1637 aa8.37□□□□□ -1.07
SPTA1-201ENST00000368147 MRC2Q9UBG0 1479 aa8.37□□□□□ -1.07
SPTA1-201ENST00000368147 CHRNA2Q15822 529 aa8.37□□□□□ -1.07
SPTA1-201ENST00000368147 MYOM3Q5VTT5 1437 aa8.37□□□□□ -1.07
SPTA1-201ENST00000368147 CCDC73Q6ZRK6 1079 aa8.36□□□□□ -1.07
SPTA1-201ENST00000368147 MYD88Q99836 296 aa8.36□□□□□ -1.07
SPTA1-201ENST00000368147 GNAI2P04899 355 aa8.36□□□□□ -1.07
SPTA1-201ENST00000368147 DZIP1Q86YF9 867 aaKnown RBP8.36□□□□□ -1.07
SPTA1-201ENST00000368147 SMC2O95347 1197 aa8.36□□□□□ -1.07
SPTA1-201ENST00000368147 CCDC96Q2M329 555 aa8.36□□□□□ -1.07
SPTA1-201ENST00000368147 ERC1Q8IUD2 1116 aa8.36□□□□□ -1.07
SPTA1-201ENST00000368147 TXLNAP40222 546 aa8.36□□□□□ -1.07
SPTA1-201ENST00000368147 JARID2Q92833 1246 aaPredicted RBP8.36□□□□□ -1.07
SPTA1-201ENST00000368147 PSMA5P28066 241 aa8.36□□□□□ -1.07
SPTA1-201ENST00000368147 EXOSC9Q06265 439 aaKnown RBP8.36□□□□□ -1.07
SPTA1-201ENST00000368147 NBPF1Q3BBV0 1214 aa8.35□□□□□ -1.07
SPTA1-201ENST00000368147 ERLIN2O94905 339 aa8.35□□□□□ -1.07
SPTA1-201ENST00000368147 DHX8Q14562 1220 aaKnown RBP8.35□□□□□ -1.07
SPTA1-201ENST00000368147 DRC1Q96MC2 740 aa8.35□□□□□ -1.07
SPTA1-201ENST00000368147 NACAP1Q9BZK3 213 aa8.35□□□□□ -1.07
SPTA1-201ENST00000368147 GRIN2BQ13224 1484 aa8.35□□□□□ -1.07
SPTA1-201ENST00000368147 SEPT7Q16181 437 aaKnown RBP8.35□□□□□ -1.07
SPTA1-201ENST00000368147 SDF4Q9BRK5 362 aa8.35□□□□□ -1.07
SPTA1-201ENST00000368147 ADAMTS8Q9UP79 889 aa8.35□□□□□ -1.07
SPTA1-201ENST00000368147 HMGB1P1B2RPK0 211 aaPredicted RBP8.35□□□□□ -1.07
SPTA1-201ENST00000368147 SKOR2Q2VWA4 1001 aaPredicted RBP8.35□□□□□ -1.07
SPTA1-201ENST00000368147 MKNK2Q9HBH9 465 aa8.35□□□□□ -1.07
SPTA1-201ENST00000368147 MCM10Q7L590 875 aa8.35□□□□□ -1.07
SPTA1-201ENST00000368147 TSPOAP1O95153 1857 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms